RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 AEBP2Q6ZN18 517 aaPredicted RBP18.32■□□□□ 0.52
UBE2F-221ENST00000480828 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
UBE2F-221ENST00000480828 SENP3Q9H4L4 574 aaPredicted RBP15.48■□□□□ 0.07
UBE2F-221ENST00000480828 PHF23Q9BUL5 403 aaPredicted RBP15.39■□□□□ 0.05
UBE2F-221ENST00000480828 FOXD1Q16676 465 aa14.49□□□□□ -0.09
UBE2F-221ENST00000480828 PLPPR3Q6T4P5 718 aa13.96□□□□□ -0.17
UBE2F-221ENST00000480828 PPP6R1Q9UPN7 881 aa13.69□□□□□ -0.22
UBE2F-221ENST00000480828 ADRA2BP18089 450 aa13.6□□□□□ -0.23
UBE2F-221ENST00000480828 PIAS4Q8N2W9 510 aaPredicted RBP13.49□□□□□ -0.25
UBE2F-221ENST00000480828 MSH5O43196 834 aa13.41□□□□□ -0.26
UBE2F-221ENST00000480828 POTEDQ86YR6 584 aa12.92□□□□□ -0.34
UBE2F-221ENST00000480828 MAPK8IP2Q13387 824 aaPredicted RBP12.47□□□□□ -0.41
UBE2F-221ENST00000480828 DMRT2Q9Y5R5 561 aa12.35□□□□□ -0.43
UBE2F-221ENST00000480828 SCAF1Q9H7N4 1312 aaKnown RBP12.31□□□□□ -0.44
UBE2F-221ENST00000480828 PPP4R3CPQ6ZMV5 832 aa12.28□□□□□ -0.44
UBE2F-221ENST00000480828 CNKSR2Q8WXI2 1034 aa12□□□□□ -0.49
UBE2F-221ENST00000480828 HOXD11P31277 338 aaPredicted RBP11.96□□□□□ -0.49
UBE2F-221ENST00000480828 RNF216Q9NWF9 866 aaPredicted RBP11.87□□□□□ -0.51
UBE2F-221ENST00000480828 NCBP3Q53F19 620 aaKnown RBP11.75□□□□□ -0.53
UBE2F-221ENST00000480828 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
UBE2F-221ENST00000480828 DCAF8L1A6NGE4 600 aa11.7□□□□□ -0.54
UBE2F-221ENST00000480828 KCNA4P22459 653 aa11.62□□□□□ -0.55
UBE2F-221ENST00000480828 RNF39Q9H2S5 420 aa11.52□□□□□ -0.57
UBE2F-221ENST00000480828 DNAJC5BQ9UF47 199 aa11.51□□□□□ -0.57
UBE2F-221ENST00000480828 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
UBE2F-221ENST00000480828 C1QBPQ07021 282 aaKnown RBP11.31□□□□□ -0.6
UBE2F-221ENST00000480828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.28□□□□□ -0.6
UBE2F-221ENST00000480828 SLC4A2P04920 1241 aa11.2□□□□□ -0.62
UBE2F-221ENST00000480828 U3KPZ7 1027 aaPredicted RBP11.18□□□□□ -0.62
UBE2F-221ENST00000480828 SPINK5Q9NQ38 1064 aaPredicted RBP10.97□□□□□ -0.65
UBE2F-221ENST00000480828 SLC4A1APQ9BWU0 796 aaKnown RBP10.93□□□□□ -0.66
UBE2F-221ENST00000480828 CAPN15O75808 1086 aa10.84□□□□□ -0.67
UBE2F-221ENST00000480828 DSG3P32926 999 aa10.84□□□□□ -0.67
UBE2F-221ENST00000480828 MYCNP04198 464 aaPredicted RBP10.78□□□□□ -0.68
UBE2F-221ENST00000480828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.77□□□□□ -0.69
UBE2F-221ENST00000480828 HNRNPUL2Q1KMD3 747 aaKnown RBP10.77□□□□□ -0.69
UBE2F-221ENST00000480828 ZBTB22O15209 634 aa10.76□□□□□ -0.69
UBE2F-221ENST00000480828 FOXD4L1Q9NU39 408 aa10.76□□□□□ -0.69
UBE2F-221ENST00000480828 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
UBE2F-221ENST00000480828 TRHP20396 242 aaPredicted RBP10.71□□□□□ -0.69
UBE2F-221ENST00000480828 APLP2Q06481 763 aa10.71□□□□□ -0.69
UBE2F-221ENST00000480828 ZNF219Q9P2Y4 722 aaPredicted RBP10.69□□□□□ -0.7
UBE2F-221ENST00000480828 ABCB7O75027 752 aa10.65□□□□□ -0.7
UBE2F-221ENST00000480828 ATF5Q9Y2D1 282 aaPredicted RBP10.62□□□□□ -0.71
UBE2F-221ENST00000480828 POLA2Q14181 598 aa10.48□□□□□ -0.73
UBE2F-221ENST00000480828 ATXN8OSP0DMR3 200 aa10.41□□□□□ -0.74
UBE2F-221ENST00000480828 CSRNP3Q8WYN3 585 aa10.35□□□□□ -0.75
UBE2F-221ENST00000480828 RBM42Q9BTD8 480 aaKnown RBP10.24□□□□□ -0.77
UBE2F-221ENST00000480828 ZBTB12Q9Y330 459 aaPredicted RBP10.22□□□□□ -0.77
UBE2F-221ENST00000480828 EHMT2Q96KQ7 1210 aa10.19□□□□□ -0.78
UBE2F-221ENST00000480828 OSCARQ8IYS5 282 aa10.17□□□□□ -0.78
UBE2F-221ENST00000480828 MKRN4PQ13434 485 aaPredicted RBP10.14□□□□□ -0.79
UBE2F-221ENST00000480828 POTEHQ6S545 545 aa10.12□□□□□ -0.79
UBE2F-221ENST00000480828 AKT1S1Q96B36 256 aa10.08□□□□□ -0.8
UBE2F-221ENST00000480828 FBLN2P98095 1184 aa10.02□□□□□ -0.81
UBE2F-221ENST00000480828 CHRDL2Q6WN34 429 aa10.01□□□□□ -0.81
UBE2F-221ENST00000480828 REM2Q8IYK8 340 aaPredicted RBP10□□□□□ -0.81
UBE2F-221ENST00000480828 SPDYE2BA6NHP3 402 aa9.97□□□□□ -0.81
UBE2F-221ENST00000480828 SPDYE6P0CI01 402 aa9.97□□□□□ -0.81
UBE2F-221ENST00000480828 SPDYE2Q495Y8 402 aa9.97□□□□□ -0.81
UBE2F-221ENST00000480828 PITPNM1O00562 1244 aa9.92□□□□□ -0.82
UBE2F-221ENST00000480828 SSUH2Q9Y2M2 353 aa9.92□□□□□ -0.82
UBE2F-221ENST00000480828 ZNF692Q9BU19 519 aaPredicted RBP9.85□□□□□ -0.83
UBE2F-221ENST00000480828 FXR2P51116 673 aaKnown RBP eCLIP9.82□□□□□ -0.84
UBE2F-221ENST00000480828 PIP4P2Q8N4L2 257 aa9.82□□□□□ -0.84
UBE2F-221ENST00000480828 PABPN1Q86U42 306 aaKnown RBP eCLIP9.73□□□□□ -0.85
UBE2F-221ENST00000480828 SPDYE1Q8NFV5 336 aaPredicted RBP9.73□□□□□ -0.85
UBE2F-221ENST00000480828 CLEC11AQ9Y240 323 aa9.69□□□□□ -0.86
UBE2F-221ENST00000480828 SPDYE4A6NLX3 237 aa9.63□□□□□ -0.87
UBE2F-221ENST00000480828 PRKAR2AP13861 404 aaKnown RBP9.62□□□□□ -0.87
UBE2F-221ENST00000480828 EVX2Q03828 476 aa9.57□□□□□ -0.88
UBE2F-221ENST00000480828 CHADLQ6NUI6 762 aa9.57□□□□□ -0.88
UBE2F-221ENST00000480828 PRR29P0C7W0 189 aa9.55□□□□□ -0.88
UBE2F-221ENST00000480828 SP7Q8TDD2 431 aaPredicted RBP9.55□□□□□ -0.88
UBE2F-221ENST00000480828 PROM2Q8N271 834 aa9.54□□□□□ -0.88
UBE2F-221ENST00000480828 HAX1O00165 279 aa9.52□□□□□ -0.89
UBE2F-221ENST00000480828 C19orf67A6NJJ6 358 aa9.49□□□□□ -0.89
UBE2F-221ENST00000480828 CREBZFQ9NS37 354 aa9.45□□□□□ -0.9
UBE2F-221ENST00000480828 STAG3Q9UJ98 1225 aa9.44□□□□□ -0.9
UBE2F-221ENST00000480828 FARP1Q9Y4F1 1045 aaPredicted RBP9.42□□□□□ -0.9
UBE2F-221ENST00000480828 MNX1P50219 401 aaPredicted RBP9.36□□□□□ -0.91
UBE2F-221ENST00000480828 CD44P16070 742 aaKnown RBP9.31□□□□□ -0.92
UBE2F-221ENST00000480828 FKBP8Q14318 412 aa9.3□□□□□ -0.92
UBE2F-221ENST00000480828 GABBR2O75899 941 aa9.28□□□□□ -0.92
UBE2F-221ENST00000480828 ZNF579Q8NAF0 562 aaKnown RBP9.22□□□□□ -0.93
UBE2F-221ENST00000480828 ZRANB1Q9UGI0 708 aa9.19□□□□□ -0.94
UBE2F-221ENST00000480828 POTEIP0CG38 1075 aa9.17□□□□□ -0.94
UBE2F-221ENST00000480828 NPM1P06748 294 aaKnown RBP eCLIP9.16□□□□□ -0.94
UBE2F-221ENST00000480828 PHF12Q96QT6 1004 aa9.13□□□□□ -0.95
UBE2F-221ENST00000480828 CLCN6P51797 869 aa9.12□□□□□ -0.95
UBE2F-221ENST00000480828 GALR2O43603 387 aaPredicted RBP9.11□□□□□ -0.95
UBE2F-221ENST00000480828 MIER1Q8N108 512 aa9.11□□□□□ -0.95
UBE2F-221ENST00000480828 RASEFQ8IZ41 740 aa9.07□□□□□ -0.96
UBE2F-221ENST00000480828 CCDC61Q9Y6R9 512 aa9.07□□□□□ -0.96
UBE2F-221ENST00000480828 PAK3O75914 559 aaPredicted RBP9.06□□□□□ -0.96
UBE2F-221ENST00000480828 PLCD3Q8N3E9 789 aa9.05□□□□□ -0.96
UBE2F-221ENST00000480828 NUBP1P53384 320 aa9.04□□□□□ -0.96
UBE2F-221ENST00000480828 TSPYL2Q9H2G4 693 aaPredicted RBP9.04□□□□□ -0.96
UBE2F-221ENST00000480828 MS4A3Q96HJ5 214 aa9.02□□□□□ -0.97
UBE2F-221ENST00000480828 PLEKHG5O94827 1062 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms