RNA–Protein interactions for RNA: ENST00000462524.5

ZNF542P-201, Transcript of zinc finger protein 542, pseudogene, humanhuman

TSL 4

Gene ZNF542P, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF542P-201ENST00000462524 NISCHQ9Y2I1 1504 aa12.83□□□□□ -0.36
ZNF542P-201ENST00000462524 DNAJC5BQ9UF47 199 aa12.08□□□□□ -0.48
ZNF542P-201ENST00000462524 ABCC9O60706 1549 aa12.02□□□□□ -0.48
ZNF542P-201ENST00000462524 DNAJC5Q9H3Z4 198 aa11.86□□□□□ -0.51
ZNF542P-201ENST00000462524 CCDC180Q9P1Z9 1646 aa11.47□□□□□ -0.57
ZNF542P-201ENST00000462524 DCAF8L2P0C7V8 631 aa11.41□□□□□ -0.58
ZNF542P-201ENST00000462524 PABPN1Q86U42 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
ZNF542P-201ENST00000462524 RB1CC1Q8TDY2 1594 aa11.16□□□□□ -0.62
ZNF542P-201ENST00000462524 NACADO15069 1562 aa10.96□□□□□ -0.65
ZNF542P-201ENST00000462524 UNC13AQ9UPW8 1703 aa10.88□□□□□ -0.67
ZNF542P-201ENST00000462524 TRIM41Q8WV44 630 aa10.84□□□□□ -0.67
ZNF542P-201ENST00000462524 CECR2Q9BXF3 1484 aa10.81□□□□□ -0.68
ZNF542P-201ENST00000462524 BICRAQ9NZM4 1560 aa10.81□□□□□ -0.68
ZNF542P-201ENST00000462524 CC2D2AQ9P2K1 1620 aa10.73□□□□□ -0.69
ZNF542P-201ENST00000462524 SCRIBQ14160 1630 aa10.7□□□□□ -0.7
ZNF542P-201ENST00000462524 CUX2O14529 1486 aa10.69□□□□□ -0.7
ZNF542P-201ENST00000462524 EIF4G1Q04637 1599 aaKnown RBP10.6□□□□□ -0.71
ZNF542P-201ENST00000462524 MYO15BQ96JP2 1530 aa10.58□□□□□ -0.72
ZNF542P-201ENST00000462524 ZCCHC6Q5VYS8 1495 aaKnown RBP10.52□□□□□ -0.73
ZNF542P-201ENST00000462524 AEBP2Q6ZN18 517 aaPredicted RBP10.51□□□□□ -0.73
ZNF542P-201ENST00000462524 SHROOM4Q9ULL8 1493 aa10.45□□□□□ -0.74
ZNF542P-201ENST00000462524 DCAF1Q9Y4B6 1507 aa10.4□□□□□ -0.74
ZNF542P-201ENST00000462524 ERCC6Q03468 1493 aa10.4□□□□□ -0.74
ZNF542P-201ENST00000462524 ILDR1Q86SU0 546 aaPredicted RBP10.31□□□□□ -0.76
ZNF542P-201ENST00000462524 NESP48681 1621 aa10.24□□□□□ -0.77
ZNF542P-201ENST00000462524 ATAD2BQ9ULI0 1458 aa10.14□□□□□ -0.79
ZNF542P-201ENST00000462524 NCAPD3P42695 1498 aa10.13□□□□□ -0.79
ZNF542P-201ENST00000462524 SMARCA2P51531 1590 aa10.12□□□□□ -0.79
ZNF542P-201ENST00000462524 BAZ1BQ9UIG0 1483 aaKnown RBP10.08□□□□□ -0.8
ZNF542P-201ENST00000462524 SMARCA4P51532 1647 aa10.05□□□□□ -0.8
ZNF542P-201ENST00000462524 THOC2Q8NI27 1593 aaKnown RBP10.05□□□□□ -0.8
ZNF542P-201ENST00000462524 TRHP20396 242 aaPredicted RBP10.04□□□□□ -0.8
ZNF542P-201ENST00000462524 OSCARQ8IYS5 282 aa10.03□□□□□ -0.8
ZNF542P-201ENST00000462524 KIF21AQ7Z4S6 1674 aa10.01□□□□□ -0.81
ZNF542P-201ENST00000462524 RIMBP3CA6NJZ7 1639 aa10□□□□□ -0.81
ZNF542P-201ENST00000462524 RIMBP3BA6NNM3 1639 aa10□□□□□ -0.81
ZNF542P-201ENST00000462524 RIMBP3Q9UFD9 1639 aa10□□□□□ -0.81
ZNF542P-201ENST00000462524 HMGXB3Q12766 1538 aa9.99□□□□□ -0.81
ZNF542P-201ENST00000462524 PDS5BQ9NTI5 1447 aa9.99□□□□□ -0.81
ZNF542P-201ENST00000462524 BAZ1AQ9NRL2 1556 aaPredicted RBP9.97□□□□□ -0.81
ZNF542P-201ENST00000462524 MROH2BQ7Z745 1585 aa9.95□□□□□ -0.82
ZNF542P-201ENST00000462524 LAMC3Q9Y6N6 1575 aa9.95□□□□□ -0.82
ZNF542P-201ENST00000462524 CADPSQ9ULU8 1353 aa9.9□□□□□ -0.82
ZNF542P-201ENST00000462524 MRC2Q9UBG0 1479 aa9.9□□□□□ -0.83
ZNF542P-201ENST00000462524 ARHGEF11O15085 1522 aa9.86□□□□□ -0.83
ZNF542P-201ENST00000462524 WIZO95785 1651 aa9.85□□□□□ -0.83
ZNF542P-201ENST00000462524 CYB5RLQ6IPT4 315 aa9.84□□□□□ -0.83
ZNF542P-201ENST00000462524 CEP164Q9UPV0 1460 aa9.84□□□□□ -0.83
ZNF542P-201ENST00000462524 FBLN2P98095 1184 aa9.83□□□□□ -0.84
ZNF542P-201ENST00000462524 FANCD2Q9BXW9 1451 aa9.82□□□□□ -0.84
ZNF542P-201ENST00000462524 PEG3Q9GZU2 1588 aa9.8□□□□□ -0.84
ZNF542P-201ENST00000462524 WDR62O43379 1518 aa9.8□□□□□ -0.84
ZNF542P-201ENST00000462524 URB2Q14146 1524 aaKnown RBP9.73□□□□□ -0.85
ZNF542P-201ENST00000462524 ZNF608Q9ULD9 1512 aaPredicted RBP9.72□□□□□ -0.85
ZNF542P-201ENST00000462524 SOCS7O14512 581 aa9.71□□□□□ -0.86
ZNF542P-201ENST00000462524 ARAP1Q96P48 1450 aa9.69□□□□□ -0.86
ZNF542P-201ENST00000462524 CFTRP13569 1480 aa9.68□□□□□ -0.86
ZNF542P-201ENST00000462524 LMTK3Q96Q04 1460 aa9.68□□□□□ -0.86
ZNF542P-201ENST00000462524 FBXO41Q8TF61 875 aa9.65□□□□□ -0.86
ZNF542P-201ENST00000462524 AQRO60306 1485 aaKnown RBP eCLIP9.65□□□□□ -0.87
ZNF542P-201ENST00000462524 RSF1Q96T23 1441 aaPredicted RBP9.65□□□□□ -0.87
ZNF542P-201ENST00000462524 IFT140Q96RY7 1462 aa9.61□□□□□ -0.87
ZNF542P-201ENST00000462524 TOP2AP11388 1531 aaKnown RBP9.6□□□□□ -0.87
ZNF542P-201ENST00000462524 CCDC88BA6NC98 1476 aa9.59□□□□□ -0.87
ZNF542P-201ENST00000462524 KDM4FA0A1W2PPD8 638 aa9.59□□□□□ -0.87
ZNF542P-201ENST00000462524 CHMP7Q8WUX9 453 aaPredicted RBP9.59□□□□□ -0.87
ZNF542P-201ENST00000462524 ERCC6L2Q5T890 1561 aa9.58□□□□□ -0.88
ZNF542P-201ENST00000462524 TOPBP1Q92547 1522 aa9.58□□□□□ -0.88
ZNF542P-201ENST00000462524 TDRD9Q8NDG6 1382 aaKnown RBP9.58□□□□□ -0.88
ZNF542P-201ENST00000462524 CHD1O14646 1710 aa9.56□□□□□ -0.88
ZNF542P-201ENST00000462524 EIF4G3O43432 1585 aaKnown RBP9.56□□□□□ -0.88
ZNF542P-201ENST00000462524 ILDR2Q71H61 639 aa9.56□□□□□ -0.88
ZNF542P-201ENST00000462524 RAD54L2Q9Y4B4 1467 aa9.55□□□□□ -0.88
ZNF542P-201ENST00000462524 SOGA1O94964 1423 aa9.51□□□□□ -0.89
ZNF542P-201ENST00000462524 DNMBPQ6XZF7 1577 aa9.49□□□□□ -0.89
ZNF542P-201ENST00000462524 PRDM2Q13029 1718 aa9.48□□□□□ -0.89
ZNF542P-201ENST00000462524 SNAPC4Q5SXM2 1469 aa9.48□□□□□ -0.89
ZNF542P-201ENST00000462524 ABCC8Q09428 1581 aa9.47□□□□□ -0.89
ZNF542P-201ENST00000462524 POLA1P09884 1462 aaPredicted RBP9.47□□□□□ -0.89
ZNF542P-201ENST00000462524 TARBP1Q13395 1621 aaKnown RBP9.45□□□□□ -0.9
ZNF542P-201ENST00000462524 HECW2Q9P2P5 1572 aa9.44□□□□□ -0.9
ZNF542P-201ENST00000462524 TTBK1Q5TCY1 1321 aaPredicted RBP9.42□□□□□ -0.9
ZNF542P-201ENST00000462524 FGD5Q6ZNL6 1462 aa9.41□□□□□ -0.9
ZNF542P-201ENST00000462524 SUPT5HO00267 1087 aaKnown RBP9.4□□□□□ -0.9
ZNF542P-201ENST00000462524 SYNJ1O43426 1573 aa9.4□□□□□ -0.9
ZNF542P-201ENST00000462524 GAPVD1Q14C86 1478 aa9.4□□□□□ -0.91
ZNF542P-201ENST00000462524 DISP3Q9P2K9 1392 aa9.39□□□□□ -0.91
ZNF542P-201ENST00000462524 GRIN2BQ13224 1484 aa9.37□□□□□ -0.91
ZNF542P-201ENST00000462524 CLASP1Q7Z460 1538 aa9.36□□□□□ -0.91
ZNF542P-201ENST00000462524 SYNJ2O15056 1496 aa9.34□□□□□ -0.91
ZNF542P-201ENST00000462524 CUX1P39880 1505 aa9.34□□□□□ -0.91
ZNF542P-201ENST00000462524 NPM1P06748 294 aaKnown RBP eCLIP9.33□□□□□ -0.92
ZNF542P-201ENST00000462524 FAM69CQ0P6D2 419 aa9.33□□□□□ -0.92
ZNF542P-201ENST00000462524 MAGI1Q96QZ7 1491 aaPredicted RBP9.33□□□□□ -0.92
ZNF542P-201ENST00000462524 KIF13AQ9H1H9 1805 aa9.33□□□□□ -0.92
ZNF542P-201ENST00000462524 PBRM1Q86U86 1689 aa9.3□□□□□ -0.92
ZNF542P-201ENST00000462524 JPH4Q96JJ6 628 aa9.25□□□□□ -0.93
ZNF542P-201ENST00000462524 PRG4Q92954 1404 aaPredicted RBP9.24□□□□□ -0.93
ZNF542P-201ENST00000462524 GRIN2AQ12879 1464 aa9.24□□□□□ -0.93
ZNF542P-201ENST00000462524 CHIC1Q5VXU3 224 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms