RNA–Protein interactions for RNA: ENST00000456642.1

PPP6C-204, Transcript of protein phosphatase 6 catalytic subunit, humanhuman

TSL 3

Gene PPP6C, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6C-204ENST00000456642 AEBP2Q6ZN18 517 aaPredicted RBP19.45■□□□□ 0.7
PPP6C-204ENST00000456642 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
PPP6C-204ENST00000456642 PHF23Q9BUL5 403 aaPredicted RBP16.72■□□□□ 0.27
PPP6C-204ENST00000456642 SENP3Q9H4L4 574 aaPredicted RBP16.62■□□□□ 0.25
PPP6C-204ENST00000456642 NISCHQ9Y2I1 1504 aa16.38■□□□□ 0.21
PPP6C-204ENST00000456642 FOXD1Q16676 465 aa15.56■□□□□ 0.08
PPP6C-204ENST00000456642 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
PPP6C-204ENST00000456642 ABCC9O60706 1549 aa15.12■□□□□ 0.01
PPP6C-204ENST00000456642 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
PPP6C-204ENST00000456642 CCDC180Q9P1Z9 1646 aa14.77□□□□□ -0.04
PPP6C-204ENST00000456642 PPP6R1Q9UPN7 881 aa14.76□□□□□ -0.05
PPP6C-204ENST00000456642 ADRA2BP18089 450 aa14.75□□□□□ -0.05
PPP6C-204ENST00000456642 MSH5O43196 834 aa14.72□□□□□ -0.05
PPP6C-204ENST00000456642 DNAJC5BQ9UF47 199 aa14.52□□□□□ -0.09
PPP6C-204ENST00000456642 PIAS4Q8N2W9 510 aaPredicted RBP14.39□□□□□ -0.11
PPP6C-204ENST00000456642 RB1CC1Q8TDY2 1594 aa14.17□□□□□ -0.14
PPP6C-204ENST00000456642 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
PPP6C-204ENST00000456642 UNC13AQ9UPW8 1703 aa14.02□□□□□ -0.16
PPP6C-204ENST00000456642 NACADO15069 1562 aa14□□□□□ -0.17
PPP6C-204ENST00000456642 BICRAQ9NZM4 1560 aa13.92□□□□□ -0.18
PPP6C-204ENST00000456642 DCAF8L2P0C7V8 631 aa13.87□□□□□ -0.19
PPP6C-204ENST00000456642 MYO15BQ96JP2 1530 aa13.69□□□□□ -0.22
PPP6C-204ENST00000456642 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
PPP6C-204ENST00000456642 PPP4R3CPQ6ZMV5 832 aa13.61□□□□□ -0.23
PPP6C-204ENST00000456642 CECR2Q9BXF3 1484 aa13.6□□□□□ -0.23
PPP6C-204ENST00000456642 ZCCHC6Q5VYS8 1495 aaKnown RBP13.54□□□□□ -0.24
PPP6C-204ENST00000456642 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
PPP6C-204ENST00000456642 EIF4G1Q04637 1599 aaKnown RBP13.53□□□□□ -0.24
PPP6C-204ENST00000456642 SHROOM4Q9ULL8 1493 aa13.48□□□□□ -0.25
PPP6C-204ENST00000456642 DCAF1Q9Y4B6 1507 aa13.45□□□□□ -0.26
PPP6C-204ENST00000456642 SCAF1Q9H7N4 1312 aaKnown RBP13.43□□□□□ -0.26
PPP6C-204ENST00000456642 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
PPP6C-204ENST00000456642 DNAJC5Q9H3Z4 198 aa13.38□□□□□ -0.27
PPP6C-204ENST00000456642 KCNA4P22459 653 aa13.35□□□□□ -0.27
PPP6C-204ENST00000456642 NCBP3Q53F19 620 aaKnown RBP13.25□□□□□ -0.29
PPP6C-204ENST00000456642 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
PPP6C-204ENST00000456642 DMRT2Q9Y5R5 561 aa13.15□□□□□ -0.3
PPP6C-204ENST00000456642 NPM3O75607 178 aaKnown RBP13.07□□□□□ -0.32
PPP6C-204ENST00000456642 CUX2O14529 1486 aa13.03□□□□□ -0.32
PPP6C-204ENST00000456642 ERCC6Q03468 1493 aa12.97□□□□□ -0.33
PPP6C-204ENST00000456642 NESP48681 1621 aa12.96□□□□□ -0.33
PPP6C-204ENST00000456642 NCAPD3P42695 1498 aa12.96□□□□□ -0.34
PPP6C-204ENST00000456642 ATAD2BQ9ULI0 1458 aa12.92□□□□□ -0.34
PPP6C-204ENST00000456642 RNF216Q9NWF9 866 aaPredicted RBP12.92□□□□□ -0.34
PPP6C-204ENST00000456642 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
PPP6C-204ENST00000456642 THOC2Q8NI27 1593 aaKnown RBP12.86□□□□□ -0.35
PPP6C-204ENST00000456642 SMARCA4P51532 1647 aa12.85□□□□□ -0.35
PPP6C-204ENST00000456642 HMGXB3Q12766 1538 aa12.83□□□□□ -0.35
PPP6C-204ENST00000456642 CACNB1Q02641 598 aaPredicted RBP12.83□□□□□ -0.36
PPP6C-204ENST00000456642 SMARCA2P51531 1590 aa12.8□□□□□ -0.36
PPP6C-204ENST00000456642 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.36
PPP6C-204ENST00000456642 BAZ1BQ9UIG0 1483 aaKnown RBP12.73□□□□□ -0.37
PPP6C-204ENST00000456642 SLC4A1APQ9BWU0 796 aaKnown RBP12.72□□□□□ -0.37
PPP6C-204ENST00000456642 PEG3Q9GZU2 1588 aa12.7□□□□□ -0.38
PPP6C-204ENST00000456642 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
PPP6C-204ENST00000456642 LAMC3Q9Y6N6 1575 aa12.69□□□□□ -0.38
PPP6C-204ENST00000456642 MROH2BQ7Z745 1585 aa12.68□□□□□ -0.38
PPP6C-204ENST00000456642 BAZ1AQ9NRL2 1556 aaPredicted RBP12.67□□□□□ -0.38
PPP6C-204ENST00000456642 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
PPP6C-204ENST00000456642 PDS5BQ9NTI5 1447 aa12.57□□□□□ -0.4
PPP6C-204ENST00000456642 WDR62O43379 1518 aa12.57□□□□□ -0.4
PPP6C-204ENST00000456642 MRC2Q9UBG0 1479 aa12.55□□□□□ -0.4
PPP6C-204ENST00000456642 RNF39Q9H2S5 420 aa12.55□□□□□ -0.4
PPP6C-204ENST00000456642 CADPSQ9ULU8 1353 aa12.54□□□□□ -0.4
PPP6C-204ENST00000456642 WIZO95785 1651 aa12.52□□□□□ -0.4
PPP6C-204ENST00000456642 FANCD2Q9BXW9 1451 aa12.43□□□□□ -0.42
PPP6C-204ENST00000456642 CEP164Q9UPV0 1460 aa12.43□□□□□ -0.42
PPP6C-204ENST00000456642 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
PPP6C-204ENST00000456642 URB2Q14146 1524 aaKnown RBP12.42□□□□□ -0.42
PPP6C-204ENST00000456642 CFTRP13569 1480 aa12.37□□□□□ -0.43
PPP6C-204ENST00000456642 RIMBP3CA6NJZ7 1639 aa12.37□□□□□ -0.43
PPP6C-204ENST00000456642 RIMBP3BA6NNM3 1639 aa12.37□□□□□ -0.43
PPP6C-204ENST00000456642 RIMBP3Q9UFD9 1639 aa12.37□□□□□ -0.43
PPP6C-204ENST00000456642 OSCARQ8IYS5 282 aa12.36□□□□□ -0.43
PPP6C-204ENST00000456642 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
PPP6C-204ENST00000456642 C1QBPQ07021 282 aaKnown RBP12.33□□□□□ -0.44
PPP6C-204ENST00000456642 ZNF608Q9ULD9 1512 aaPredicted RBP12.32□□□□□ -0.44
PPP6C-204ENST00000456642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.29□□□□□ -0.44
PPP6C-204ENST00000456642 RSF1Q96T23 1441 aaPredicted RBP12.28□□□□□ -0.44
PPP6C-204ENST00000456642 ZBTB22O15209 634 aa12.28□□□□□ -0.44
PPP6C-204ENST00000456642 ARHGEF11O15085 1522 aa12.27□□□□□ -0.44
PPP6C-204ENST00000456642 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.44
PPP6C-204ENST00000456642 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
PPP6C-204ENST00000456642 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
PPP6C-204ENST00000456642 PRDM2Q13029 1718 aa12.24□□□□□ -0.45
PPP6C-204ENST00000456642 EIF4G3O43432 1585 aaKnown RBP12.19□□□□□ -0.46
PPP6C-204ENST00000456642 TOPBP1Q92547 1522 aa12.19□□□□□ -0.46
PPP6C-204ENST00000456642 CHD1O14646 1710 aa12.18□□□□□ -0.46
PPP6C-204ENST00000456642 IFT140Q96RY7 1462 aa12.18□□□□□ -0.46
PPP6C-204ENST00000456642 ARAP1Q96P48 1450 aa12.17□□□□□ -0.46
PPP6C-204ENST00000456642 CCDC88BA6NC98 1476 aa12.16□□□□□ -0.46
PPP6C-204ENST00000456642 CYB5RLQ6IPT4 315 aa12.16□□□□□ -0.46
PPP6C-204ENST00000456642 TARBP1Q13395 1621 aaKnown RBP12.14□□□□□ -0.47
PPP6C-204ENST00000456642 AQRO60306 1485 aaKnown RBP eCLIP12.13□□□□□ -0.47
PPP6C-204ENST00000456642 DNMBPQ6XZF7 1577 aa12.09□□□□□ -0.47
PPP6C-204ENST00000456642 U3KPZ7 1027 aaPredicted RBP12.08□□□□□ -0.48
PPP6C-204ENST00000456642 POLA1P09884 1462 aaPredicted RBP12.05□□□□□ -0.48
PPP6C-204ENST00000456642 RAD54L2Q9Y4B4 1467 aa12.05□□□□□ -0.48
PPP6C-204ENST00000456642 MYCNP04198 464 aaPredicted RBP12.04□□□□□ -0.48
PPP6C-204ENST00000456642 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms