Protein–RNA interactions for Protein: P0CW24

PNMA6A, Paraneoplastic antigen-like protein 6A, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6AP0CW24 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA6AP0CW24 AC079598.2-202ENST00000546624 1451 ntBASIC21.03■□□□□ 0.96
PNMA6AP0CW24 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA6AP0CW24 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.03■□□□□ 0.96
PNMA6AP0CW24 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.03■□□□□ 0.96
PNMA6AP0CW24 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.03■□□□□ 0.96
PNMA6AP0CW24 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA6AP0CW24 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.03■□□□□ 0.96
PNMA6AP0CW24 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA6AP0CW24 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA6AP0CW24 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA6AP0CW24 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PNMA6AP0CW24 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA6AP0CW24 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA6AP0CW24 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 AC104581.1-202ENST00000635932 2618 ntBASIC21.02■□□□□ 0.96
PNMA6AP0CW24 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.02■□□□□ 0.96
PNMA6AP0CW24 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA6AP0CW24 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.02■□□□□ 0.95
PNMA6AP0CW24 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
PNMA6AP0CW24 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.02■□□□□ 0.95
PNMA6AP0CW24 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PNMA6AP0CW24 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
PNMA6AP0CW24 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
PNMA6AP0CW24 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.02■□□□□ 0.95
PNMA6AP0CW24 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 AL390961.4-201ENST00000623958 2535 ntBASIC21.01■□□□□ 0.95
PNMA6AP0CW24 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA6AP0CW24 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PNMA6AP0CW24 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21■□□□□ 0.95
PNMA6AP0CW24 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PNMA6AP0CW24 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PNMA6AP0CW24 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PNMA6AP0CW24 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21■□□□□ 0.95
PNMA6AP0CW24 LINC01465-201ENST00000408887 1940 ntBASIC21■□□□□ 0.95
PNMA6AP0CW24 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21■□□□□ 0.95
PNMA6AP0CW24 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
PNMA6AP0CW24 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PNMA6AP0CW24 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21■□□□□ 0.95
PNMA6AP0CW24 ID1-201ENST00000376105 1233 ntBASIC21■□□□□ 0.95
PNMA6AP0CW24 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PNMA6AP0CW24 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PNMA6AP0CW24 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21■□□□□ 0.95
PNMA6AP0CW24 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PNMA6AP0CW24 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PNMA6AP0CW24 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PNMA6AP0CW24 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PNMA6AP0CW24 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21■□□□□ 0.95
PNMA6AP0CW24 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PNMA6AP0CW24 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.99■□□□□ 0.95
PNMA6AP0CW24 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.99■□□□□ 0.95
PNMA6AP0CW24 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.99■□□□□ 0.95
PNMA6AP0CW24 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.99■□□□□ 0.95
PNMA6AP0CW24 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PNMA6AP0CW24 AC009113.1-201ENST00000570267 2443 ntBASIC20.99■□□□□ 0.95
PNMA6AP0CW24 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PNMA6AP0CW24 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.99■□□□□ 0.95
PNMA6AP0CW24 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PNMA6AP0CW24 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PNMA6AP0CW24 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PNMA6AP0CW24 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.99■□□□□ 0.95
PNMA6AP0CW24 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PNMA6AP0CW24 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PNMA6AP0CW24 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PNMA6AP0CW24 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PNMA6AP0CW24 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PNMA6AP0CW24 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.98■□□□□ 0.95
PNMA6AP0CW24 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms