RNA–Protein interactions for RNA: ENST00000589559.5

RBM42-204, Transcript of RNA binding motif protein 42, humanhuman

TSL 5 BASIC

Gene RBM42, Length 1,328 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-204ENST00000589559 NISCHQ9Y2I1 1504 aa48.44■■■■■ 5.34
RBM42-204ENST00000589559 CCDC180Q9P1Z9 1646 aa43.07■■■■■ 4.49
RBM42-204ENST00000589559 ABCC9O60706 1549 aa42.01■■■■■ 4.32
RBM42-204ENST00000589559 RB1CC1Q8TDY2 1594 aa40.58■■■■■ 4.09
RBM42-204ENST00000589559 NACADO15069 1562 aa40.56■■■■■ 4.08
RBM42-204ENST00000589559 DCAF8L2P0C7V8 631 aa40.56■■■■■ 4.08
RBM42-204ENST00000589559 MYO15BQ96JP2 1530 aa40.38■■■■■ 4.05
RBM42-204ENST00000589559 ZCCHC6Q5VYS8 1495 aaKnown RBP40.32■■■■■ 4.04
RBM42-204ENST00000589559 DCAF1Q9Y4B6 1507 aa40.18■■■■■ 4.02
RBM42-204ENST00000589559 UNC13AQ9UPW8 1703 aa39.59■■■■□ 3.93
RBM42-204ENST00000589559 PABPN1Q86U42 306 aaKnown RBP eCLIP39.29■■■■□ 3.88
RBM42-204ENST00000589559 SCRIBQ14160 1630 aa39.18■■■■□ 3.86
RBM42-204ENST00000589559 BICRAQ9NZM4 1560 aa39.16■■■■□ 3.86
RBM42-204ENST00000589559 SHROOM4Q9ULL8 1493 aa39.02■■■■□ 3.84
RBM42-204ENST00000589559 DNAJC5BQ9UF47 199 aa38.47■■■■□ 3.75
RBM42-204ENST00000589559 EIF4G1Q04637 1599 aaKnown RBP38.2■■■■□ 3.71
RBM42-204ENST00000589559 CC2D2AQ9P2K1 1620 aa38.01■■■■□ 3.68
RBM42-204ENST00000589559 CECR2Q9BXF3 1484 aa37.81■■■■□ 3.64
RBM42-204ENST00000589559 BAZ1AQ9NRL2 1556 aaPredicted RBP37.6■■■■□ 3.61
RBM42-204ENST00000589559 SMARCA4P51532 1647 aa37.53■■■■□ 3.6
RBM42-204ENST00000589559 NCAPD3P42695 1498 aa37.41■■■■□ 3.58
RBM42-204ENST00000589559 SMARCA2P51531 1590 aa37.41■■■■□ 3.58
RBM42-204ENST00000589559 ATAD2BQ9ULI0 1458 aa37.36■■■■□ 3.57
RBM42-204ENST00000589559 MROH2BQ7Z745 1585 aa37.24■■■■□ 3.55
RBM42-204ENST00000589559 PEG3Q9GZU2 1588 aa37.23■■■■□ 3.55
RBM42-204ENST00000589559 HMGXB3Q12766 1538 aa37.18■■■■□ 3.54
RBM42-204ENST00000589559 BAZ1BQ9UIG0 1483 aaKnown RBP37.1■■■■□ 3.53
RBM42-204ENST00000589559 RSF1Q96T23 1441 aaPredicted RBP36.9■■■■□ 3.5
RBM42-204ENST00000589559 WIZO95785 1651 aa36.83■■■■□ 3.49
RBM42-204ENST00000589559 TOP2AP11388 1531 aaKnown RBP36.53■■■■□ 3.44
RBM42-204ENST00000589559 LAMC3Q9Y6N6 1575 aa36.42■■■■□ 3.42
RBM42-204ENST00000589559 CADPSQ9ULU8 1353 aa36.33■■■■□ 3.41
RBM42-204ENST00000589559 ERCC6Q03468 1493 aa36.33■■■■□ 3.41
RBM42-204ENST00000589559 NESP48681 1621 aa36.3■■■■□ 3.4
RBM42-204ENST00000589559 PDS5BQ9NTI5 1447 aa36.25■■■■□ 3.39
RBM42-204ENST00000589559 CCDC88BA6NC98 1476 aa36.09■■■■□ 3.37
RBM42-204ENST00000589559 CFTRP13569 1480 aa36.08■■■■□ 3.37
RBM42-204ENST00000589559 SUPT5HO00267 1087 aaKnown RBP36.05■■■■□ 3.36
RBM42-204ENST00000589559 KIF21AQ7Z4S6 1674 aa35.99■■■■□ 3.35
RBM42-204ENST00000589559 CUX2O14529 1486 aa35.97■■■■□ 3.35
RBM42-204ENST00000589559 FANCD2Q9BXW9 1451 aa35.85■■■■□ 3.33
RBM42-204ENST00000589559 PRDM2Q13029 1718 aa35.85■■■■□ 3.33
RBM42-204ENST00000589559 CEP164Q9UPV0 1460 aa35.83■■■■□ 3.33
RBM42-204ENST00000589559 THOC2Q8NI27 1593 aaKnown RBP35.82■■■■□ 3.32
RBM42-204ENST00000589559 MRC2Q9UBG0 1479 aa35.75■■■■□ 3.31
RBM42-204ENST00000589559 WDR62O43379 1518 aa35.59■■■■□ 3.29
RBM42-204ENST00000589559 ABCC8Q09428 1581 aa35.47■■■■□ 3.27
RBM42-204ENST00000589559 URB2Q14146 1524 aaKnown RBP35.4■■■■□ 3.26
RBM42-204ENST00000589559 TOPBP1Q92547 1522 aa35.25■■■■□ 3.23
RBM42-204ENST00000589559 DNMBPQ6XZF7 1577 aa35.23■■■■□ 3.23
RBM42-204ENST00000589559 IFT140Q96RY7 1462 aa35.11■■■■□ 3.21
RBM42-204ENST00000589559 POLA1P09884 1462 aaPredicted RBP34.94■■■■□ 3.18
RBM42-204ENST00000589559 CUX1P39880 1505 aa34.94■■■■□ 3.18
RBM42-204ENST00000589559 SOGA1O94964 1423 aa34.91■■■■□ 3.18
RBM42-204ENST00000589559 FGD5Q6ZNL6 1462 aa34.87■■■■□ 3.17
RBM42-204ENST00000589559 WRNQ14191 1432 aaPredicted RBP eCLIP34.86■■■■□ 3.17
RBM42-204ENST00000589559 DNAJC5Q9H3Z4 198 aa34.83■■■■□ 3.17
RBM42-204ENST00000589559 TARBP1Q13395 1621 aaKnown RBP34.82■■■■□ 3.16
RBM42-204ENST00000589559 ZNF608Q9ULD9 1512 aaPredicted RBP34.78■■■■□ 3.16
RBM42-204ENST00000589559 RAD54L2Q9Y4B4 1467 aa34.75■■■■□ 3.15
RBM42-204ENST00000589559 WDR97A6NE52 1622 aa34.73■■■■□ 3.15
RBM42-204ENST00000589559 TOP2BQ02880 1626 aa34.73■■■■□ 3.15
RBM42-204ENST00000589559 BIVM-ERCC5R4GMW8 1640 aa34.7■■■■□ 3.15
RBM42-204ENST00000589559 EIF4G3O43432 1585 aaKnown RBP34.7■■■■□ 3.14
RBM42-204ENST00000589559 AQRO60306 1485 aaKnown RBP eCLIP34.65■■■■□ 3.142e-6■■■□□ 18.2
RBM42-204ENST00000589559 TDRD9Q8NDG6 1382 aaKnown RBP34.63■■■■□ 3.13
RBM42-204ENST00000589559 SYNJ1O43426 1573 aa34.6■■■■□ 3.13
RBM42-204ENST00000589559 ABCA10Q8WWZ4 1543 aa34.59■■■■□ 3.13
RBM42-204ENST00000589559 OSCARQ8IYS5 282 aa34.58■■■■□ 3.13
RBM42-204ENST00000589559 GRIN2BQ13224 1484 aa34.49■■■■□ 3.11
RBM42-204ENST00000589559 GAPVD1Q14C86 1478 aa34.48■■■■□ 3.11
RBM42-204ENST00000589559 MAGI1Q96QZ7 1491 aaPredicted RBP34.4■■■■□ 3.1
RBM42-204ENST00000589559 PBRM1Q86U86 1689 aa34.36■■■■□ 3.09
RBM42-204ENST00000589559 FBLN2P98095 1184 aa34.35■■■■□ 3.09
RBM42-204ENST00000589559 ABCA5Q8WWZ7 1642 aa34.35■■■■□ 3.09
RBM42-204ENST00000589559 CHMP7Q8WUX9 453 aaPredicted RBP34.33■■■■□ 3.09
RBM42-204ENST00000589559 SNAPC4Q5SXM2 1469 aa34.33■■■■□ 3.09
RBM42-204ENST00000589559 CHD1O14646 1710 aa34.3■■■■□ 3.08
RBM42-204ENST00000589559 SYNJ2O15056 1496 aa34.24■■■■□ 3.07
RBM42-204ENST00000589559 ERICH3Q5RHP9 1530 aa34.22■■■■□ 3.07
RBM42-204ENST00000589559 KIF27Q86VH2 1401 aa34.2■■■■□ 3.07
RBM42-204ENST00000589559 TRIM41Q8WV44 630 aa34.16■■■■□ 3.06
RBM42-204ENST00000589559 FHAD1B1AJZ9 1412 aa34.12■■■■□ 3.05
RBM42-204ENST00000589559 ADAMTS12P58397 1594 aa34.02■■■■□ 3.04
RBM42-204ENST00000589559 GRIN2AQ12879 1464 aa33.99■■■■□ 3.03
RBM42-204ENST00000589559 IGF1RP08069 1367 aa33.98■■■■□ 3.03
RBM42-204ENST00000589559 CUL7Q14999 1698 aa33.89■■■■□ 3.02
RBM42-204ENST00000589559 CLASP1Q7Z460 1538 aa33.87■■■■□ 3.01
RBM42-204ENST00000589559 NUP160Q12769 1436 aa33.84■■■■□ 3.01
RBM42-204ENST00000589559 CARMIL1Q5VZK9 1371 aa33.83■■■■□ 3.01
RBM42-204ENST00000589559 ARHGEF11O15085 1522 aa33.81■■■■□ 3
RBM42-204ENST00000589559 RIMBP3CA6NJZ7 1639 aa33.81■■■■□ 3
RBM42-204ENST00000589559 RIMBP3BA6NNM3 1639 aa33.81■■■■□ 3
RBM42-204ENST00000589559 RIMBP3Q9UFD9 1639 aa33.81■■■■□ 3
RBM42-204ENST00000589559 CEP170Q5SW79 1584 aa33.72■■■□□ 2.99
RBM42-204ENST00000589559 CHIC1Q5VXU3 224 aa33.66■■■□□ 2.98
RBM42-204ENST00000589559 RUSC2Q8N2Y8 1516 aa33.65■■■□□ 2.98
RBM42-204ENST00000589559 EEA1Q15075 1411 aa33.63■■■□□ 2.97
RBM42-204ENST00000589559 RAPGEF2Q9Y4G8 1499 aa33.61■■■□□ 2.97
RBM42-204ENST00000589559 JPH4Q96JJ6 628 aa33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms