RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 NISCHQ9Y2I1 1504 aa44.37■■■■■ 4.69
CHTOP-204ENST00000368694 CCDC180Q9P1Z9 1646 aa38.81■■■■□ 3.8
CHTOP-204ENST00000368694 ZCCHC6Q5VYS8 1495 aaKnown RBP37.24■■■■□ 3.55
CHTOP-204ENST00000368694 ABCC9O60706 1549 aa36.85■■■■□ 3.49
CHTOP-204ENST00000368694 DCAF8L2P0C7V8 631 aa36.78■■■■□ 3.48
CHTOP-204ENST00000368694 DCAF1Q9Y4B6 1507 aa36.64■■■■□ 3.46
CHTOP-204ENST00000368694 MYO15BQ96JP2 1530 aa36.26■■■■□ 3.4
CHTOP-204ENST00000368694 SHROOM4Q9ULL8 1493 aa36.15■■■■□ 3.38
CHTOP-204ENST00000368694 NACADO15069 1562 aa36.15■■■■□ 3.38
CHTOP-204ENST00000368694 RB1CC1Q8TDY2 1594 aa35.91■■■■□ 3.34
CHTOP-204ENST00000368694 SCRIBQ14160 1630 aa35.71■■■■□ 3.31
CHTOP-204ENST00000368694 UNC13AQ9UPW8 1703 aa35.24■■■■□ 3.23
CHTOP-204ENST00000368694 BICRAQ9NZM4 1560 aa34.8■■■■□ 3.16
CHTOP-204ENST00000368694 PABPN1Q86U42 306 aaKnown RBP eCLIP34.7■■■■□ 3.15
CHTOP-204ENST00000368694 SUPT5HO00267 1087 aaKnown RBP34.69■■■■□ 3.14
CHTOP-204ENST00000368694 CECR2Q9BXF3 1484 aa34.49■■■■□ 3.11
CHTOP-204ENST00000368694 RSF1Q96T23 1441 aaPredicted RBP34.33■■■■□ 3.09
CHTOP-204ENST00000368694 BAZ1AQ9NRL2 1556 aaPredicted RBP34.3■■■■□ 3.08
CHTOP-204ENST00000368694 MROH2BQ7Z745 1585 aa34.28■■■■□ 3.08
CHTOP-204ENST00000368694 SMARCA4P51532 1647 aa34.18■■■■□ 3.06
CHTOP-204ENST00000368694 WIZO95785 1651 aa34.04■■■■□ 3.04
CHTOP-204ENST00000368694 EIF4G1Q04637 1599 aaKnown RBP33.79■■■■□ 3
CHTOP-204ENST00000368694 PEG3Q9GZU2 1588 aa33.72■■■□□ 2.99
CHTOP-204ENST00000368694 TOP2AP11388 1531 aaKnown RBP33.64■■■□□ 2.98
CHTOP-204ENST00000368694 SMARCA2P51531 1590 aa33.63■■■□□ 2.97
CHTOP-204ENST00000368694 ATAD2BQ9ULI0 1458 aa33.62■■■□□ 2.97
CHTOP-204ENST00000368694 BAZ1BQ9UIG0 1483 aaKnown RBP33.46■■■□□ 2.95
CHTOP-204ENST00000368694 CC2D2AQ9P2K1 1620 aa33.35■■■□□ 2.93
CHTOP-204ENST00000368694 NCAPD3P42695 1498 aa33.32■■■□□ 2.93
CHTOP-204ENST00000368694 HMGXB3Q12766 1538 aa33.31■■■□□ 2.92
CHTOP-204ENST00000368694 CCDC88BA6NC98 1476 aa33.28■■■□□ 2.92
CHTOP-204ENST00000368694 CHIC1Q5VXU3 224 aa33.04■■■□□ 2.88
CHTOP-204ENST00000368694 TRIM41Q8WV44 630 aa32.61■■■□□ 2.81
CHTOP-204ENST00000368694 ABCC8Q09428 1581 aa32.59■■■□□ 2.81
CHTOP-204ENST00000368694 DNAJC5BQ9UF47 199 aa32.57■■■□□ 2.8
CHTOP-204ENST00000368694 CFTRP13569 1480 aa32.56■■■□□ 2.8
CHTOP-204ENST00000368694 PRDM2Q13029 1718 aa32.5■■■□□ 2.79
CHTOP-204ENST00000368694 CADPSQ9ULU8 1353 aa32.48■■■□□ 2.79
CHTOP-204ENST00000368694 WRNQ14191 1432 aaPredicted RBP eCLIP32.36■■■□□ 2.775e-6■■□□□ 12.5
CHTOP-204ENST00000368694 NESP48681 1621 aa32.3■■■□□ 2.76
CHTOP-204ENST00000368694 LAMC3Q9Y6N6 1575 aa32.29■■■□□ 2.76
CHTOP-204ENST00000368694 SYNJ1O43426 1573 aa32.25■■■□□ 2.75
CHTOP-204ENST00000368694 FANCD2Q9BXW9 1451 aa32.16■■■□□ 2.74
CHTOP-204ENST00000368694 TOP2BQ02880 1626 aa32.13■■■□□ 2.73
CHTOP-204ENST00000368694 BIVM-ERCC5R4GMW8 1640 aa32.1■■■□□ 2.73
CHTOP-204ENST00000368694 CUX1P39880 1505 aa32.07■■■□□ 2.72
CHTOP-204ENST00000368694 FAM9AQ8IZU1 332 aaPredicted RBP32.04■■■□□ 2.72
CHTOP-204ENST00000368694 PDS5BQ9NTI5 1447 aa32.02■■■□□ 2.72
CHTOP-204ENST00000368694 CEP164Q9UPV0 1460 aa32■■■□□ 2.71
CHTOP-204ENST00000368694 KIF21AQ7Z4S6 1674 aa31.96■■■□□ 2.71
CHTOP-204ENST00000368694 SOGA1O94964 1423 aa31.9■■■□□ 2.7
CHTOP-204ENST00000368694 DNMBPQ6XZF7 1577 aa31.85■■■□□ 2.69
CHTOP-204ENST00000368694 LOC105371045A0A1W2PR82 267 aa31.81■■■□□ 2.68
CHTOP-204ENST00000368694 TOPBP1Q92547 1522 aa31.79■■■□□ 2.68
CHTOP-204ENST00000368694 EEA1Q15075 1411 aa31.79■■■□□ 2.68
CHTOP-204ENST00000368694 RUSC2Q8N2Y8 1516 aa31.78■■■□□ 2.68
CHTOP-204ENST00000368694 FGD5Q6ZNL6 1462 aa31.76■■■□□ 2.68
CHTOP-204ENST00000368694 URB2Q14146 1524 aaKnown RBP31.76■■■□□ 2.67
CHTOP-204ENST00000368694 ERCC6Q03468 1493 aa31.65■■■□□ 2.66
CHTOP-204ENST00000368694 EHMT2Q96KQ7 1210 aa31.64■■■□□ 2.66
CHTOP-204ENST00000368694 CSRNP3Q8WYN3 585 aa31.63■■■□□ 2.65
CHTOP-204ENST00000368694 POLA1P09884 1462 aaPredicted RBP31.62■■■□□ 2.65
CHTOP-204ENST00000368694 MRC2Q9UBG0 1479 aa31.62■■■□□ 2.65
CHTOP-204ENST00000368694 KIF27Q86VH2 1401 aa31.56■■■□□ 2.64
CHTOP-204ENST00000368694 CUX2O14529 1486 aa31.53■■■□□ 2.64
CHTOP-204ENST00000368694 RAD54L2Q9Y4B4 1467 aa31.52■■■□□ 2.64
CHTOP-204ENST00000368694 WDR62O43379 1518 aa31.47■■■□□ 2.63
CHTOP-204ENST00000368694 ABCA10Q8WWZ4 1543 aa31.45■■■□□ 2.63
CHTOP-204ENST00000368694 THOC2Q8NI27 1593 aaKnown RBP31.43■■■□□ 2.62
CHTOP-204ENST00000368694 KIF21BO75037 1637 aa31.41■■■□□ 2.62
CHTOP-204ENST00000368694 WDR97A6NE52 1622 aa31.41■■■□□ 2.62
CHTOP-204ENST00000368694 GOLGA3Q08378 1498 aa31.37■■■□□ 2.61
CHTOP-204ENST00000368694 TARBP1Q13395 1621 aaKnown RBP31.33■■■□□ 2.61
CHTOP-204ENST00000368694 UBTFP17480 764 aaKnown RBP31.27■■■□□ 2.6
CHTOP-204ENST00000368694 RAPGEF2Q9Y4G8 1499 aa31.27■■■□□ 2.6
CHTOP-204ENST00000368694 PRXQ9BXM0 1461 aa31.26■■■□□ 2.6
CHTOP-204ENST00000368694 IGF1RP08069 1367 aa31.25■■■□□ 2.59
CHTOP-204ENST00000368694 ABCA5Q8WWZ7 1642 aa31.24■■■□□ 2.59
CHTOP-204ENST00000368694 TDRD9Q8NDG6 1382 aaKnown RBP31.23■■■□□ 2.59
CHTOP-204ENST00000368694 ERICH3Q5RHP9 1530 aa31.22■■■□□ 2.59
CHTOP-204ENST00000368694 IFT140Q96RY7 1462 aa31.2■■■□□ 2.59
CHTOP-204ENST00000368694 TNIKQ9UKE5 1360 aa31.2■■■□□ 2.59
CHTOP-204ENST00000368694 GAPVD1Q14C86 1478 aa31.18■■■□□ 2.58
CHTOP-204ENST00000368694 CARMIL1Q5VZK9 1371 aa31.13■■■□□ 2.57
CHTOP-204ENST00000368694 CUL7Q14999 1698 aa31.11■■■□□ 2.57
CHTOP-204ENST00000368694 PBRM1Q86U86 1689 aa31.08■■■□□ 2.57
CHTOP-204ENST00000368694 CEP162Q5TB80 1403 aa31.07■■■□□ 2.56
CHTOP-204ENST00000368694 AQRO60306 1485 aaKnown RBP eCLIP31.06■■■□□ 2.565e-9■■■■■ 42.9
CHTOP-204ENST00000368694 ZNF608Q9ULD9 1512 aaPredicted RBP31.05■■■□□ 2.56
CHTOP-204ENST00000368694 EIF4G3O43432 1585 aaKnown RBP30.99■■■□□ 2.55
CHTOP-204ENST00000368694 GRIN2BQ13224 1484 aa30.95■■■□□ 2.55
CHTOP-204ENST00000368694 CLIP1P30622 1438 aa30.86■■■□□ 2.53
CHTOP-204ENST00000368694 RANGAP1P46060 587 aaPredicted RBP30.86■■■□□ 2.53
CHTOP-204ENST00000368694 ADAMTS12P58397 1594 aa30.85■■■□□ 2.53
CHTOP-204ENST00000368694 FHAD1B1AJZ9 1412 aa30.82■■■□□ 2.52
CHTOP-204ENST00000368694 SNAPC4Q5SXM2 1469 aa30.79■■■□□ 2.52
CHTOP-204ENST00000368694 CTTNBP2Q8WZ74 1663 aa30.78■■■□□ 2.52
CHTOP-204ENST00000368694 MAGI1Q96QZ7 1491 aaPredicted RBP30.71■■■□□ 2.51
CHTOP-204ENST00000368694 ARHGAP35Q9NRY4 1499 aa30.59■■■□□ 2.49
CHTOP-204ENST00000368694 SYNJ2O15056 1496 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms