RNA–Protein interactions for RNA: ENST00000392302.6

NTRK1-203, Transcript of neurotrophic receptor tyrosine kinase 1, humanhuman

TSL 5 BASIC

Gene NTRK1, Length 2,609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK1-203ENST00000392302 NISCHQ9Y2I1 1504 aa35.41■■■■□ 3.26
NTRK1-203ENST00000392302 SHROOM4Q9ULL8 1493 aa30.76■■■□□ 2.51
NTRK1-203ENST00000392302 SUPT5HO00267 1087 aaKnown RBP30.5■■■□□ 2.47
NTRK1-203ENST00000392302 HRCP23327 699 aa30.2■■■□□ 2.42
NTRK1-203ENST00000392302 ZCCHC6Q5VYS8 1495 aaKnown RBP30.07■■■□□ 2.4
NTRK1-203ENST00000392302 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
NTRK1-203ENST00000392302 CHIC1Q5VXU3 224 aa29.92■■■□□ 2.38
NTRK1-203ENST00000392302 CCDC180Q9P1Z9 1646 aa29.79■■■□□ 2.36
NTRK1-203ENST00000392302 PCGF6Q9BYE7 350 aa29.75■■■□□ 2.35
NTRK1-203ENST00000392302 PPARGC1BQ86YN6 1023 aaKnown RBP29.43■■■□□ 2.3
NTRK1-203ENST00000392302 DCAF1Q9Y4B6 1507 aa29.4■■■□□ 2.3
NTRK1-203ENST00000392302 DCAF8L2P0C7V8 631 aa29.3■■■□□ 2.28
NTRK1-203ENST00000392302 LOC105371045A0A1W2PR82 267 aa29.08■■■□□ 2.25
NTRK1-203ENST00000392302 TRIM26Q12899 539 aaPredicted RBP29.03■■■□□ 2.24
NTRK1-203ENST00000392302 ZEB1P37275 1124 aaPredicted RBP28.73■■■□□ 2.19
NTRK1-203ENST00000392302 PELP1Q8IZL8 1130 aaKnown RBP28.6■■■□□ 2.17
NTRK1-203ENST00000392302 ABCC9O60706 1549 aa28.53■■■□□ 2.16
NTRK1-203ENST00000392302 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
NTRK1-203ENST00000392302 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
NTRK1-203ENST00000392302 SCAF1Q9H7N4 1312 aaKnown RBP28.23■■■□□ 2.11
NTRK1-203ENST00000392302 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
NTRK1-203ENST00000392302 RB1CC1Q8TDY2 1594 aa28.12■■■□□ 2.09
NTRK1-203ENST00000392302 SCRIBQ14160 1630 aa28.09■■■□□ 2.09
NTRK1-203ENST00000392302 EHMT2Q96KQ7 1210 aa27.93■■■□□ 2.06
NTRK1-203ENST00000392302 ACIN1Q9UKV3 1341 aaKnown RBP27.77■■■□□ 2.04
NTRK1-203ENST00000392302 CCER1Q8TC90 406 aaPredicted RBP27.73■■■□□ 2.03
NTRK1-203ENST00000392302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.71■■■□□ 2.03
NTRK1-203ENST00000392302 NEUROD1Q13562 356 aa27.65■■■□□ 2.02
NTRK1-203ENST00000392302 CENPBP07199 599 aaPredicted RBP27.59■■■□□ 2.01
NTRK1-203ENST00000392302 CECR2Q9BXF3 1484 aa27.58■■■□□ 2.01
NTRK1-203ENST00000392302 MROH2BQ7Z745 1585 aa27.57■■■□□ 2
NTRK1-203ENST00000392302 DIEXFQ68CQ4 756 aaKnown RBP27.56■■■□□ 2
NTRK1-203ENST00000392302 WIZO95785 1651 aa27.49■■□□□ 1.99
NTRK1-203ENST00000392302 GTF3C3Q9Y5Q9 886 aa27.48■■□□□ 1.99
NTRK1-203ENST00000392302 MYT1Q01538 1121 aa27.41■■□□□ 1.98
NTRK1-203ENST00000392302 NACADO15069 1562 aa27.39■■□□□ 1.98
NTRK1-203ENST00000392302 BAZ1AQ9NRL2 1556 aaPredicted RBP27.36■■□□□ 1.97
NTRK1-203ENST00000392302 WRNQ14191 1432 aaPredicted RBP eCLIP27.35■■□□□ 1.97
NTRK1-203ENST00000392302 EIF4G1Q04637 1599 aaKnown RBP27.35■■□□□ 1.97
NTRK1-203ENST00000392302 TTBK1Q5TCY1 1321 aaPredicted RBP27.23■■□□□ 1.95
NTRK1-203ENST00000392302 CEP162Q5TB80 1403 aa27.21■■□□□ 1.95
NTRK1-203ENST00000392302 ZNF316A6NFI3 1004 aaPredicted RBP27.16■■□□□ 1.94
NTRK1-203ENST00000392302 ABCC8Q09428 1581 aa27.12■■□□□ 1.93
NTRK1-203ENST00000392302 CCDC88BA6NC98 1476 aa27.12■■□□□ 1.93
NTRK1-203ENST00000392302 TNIKQ9UKE5 1360 aa27.11■■□□□ 1.93
NTRK1-203ENST00000392302 TOP2AP11388 1531 aaKnown RBP27.04■■□□□ 1.92
NTRK1-203ENST00000392302 EEA1Q15075 1411 aa26.99■■□□□ 1.91
NTRK1-203ENST00000392302 SOGA1O94964 1423 aa26.98■■□□□ 1.91
NTRK1-203ENST00000392302 YTHDC1Q96MU7 727 aaKnown RBP26.96■■□□□ 1.91
NTRK1-203ENST00000392302 UBTFP17480 764 aaKnown RBP26.94■■□□□ 1.9
NTRK1-203ENST00000392302 CSRNP3Q8WYN3 585 aa26.93■■□□□ 1.9
NTRK1-203ENST00000392302 SMARCA2P51531 1590 aa26.91■■□□□ 1.9
NTRK1-203ENST00000392302 GOLGA3Q08378 1498 aa26.85■■□□□ 1.89
NTRK1-203ENST00000392302 SMARCA4P51532 1647 aa26.84■■□□□ 1.89
NTRK1-203ENST00000392302 MIER1Q8N108 512 aa26.83■■□□□ 1.89
NTRK1-203ENST00000392302 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
NTRK1-203ENST00000392302 HNRNPUL2Q1KMD3 747 aaKnown RBP26.73■■□□□ 1.87
NTRK1-203ENST00000392302 CEP164Q9UPV0 1460 aa26.62■■□□□ 1.85
NTRK1-203ENST00000392302 KIF21BO75037 1637 aa26.58■■□□□ 1.85
NTRK1-203ENST00000392302 CLIP1P30622 1438 aa26.57■■□□□ 1.84
NTRK1-203ENST00000392302 APLP2Q06481 763 aa26.54■■□□□ 1.84
NTRK1-203ENST00000392302 VPS8Q8N3P4 1428 aa26.54■■□□□ 1.84
NTRK1-203ENST00000392302 CLSPNQ9HAW4 1339 aa26.47■■□□□ 1.83
NTRK1-203ENST00000392302 UNC13AQ9UPW8 1703 aa26.46■■□□□ 1.83
NTRK1-203ENST00000392302 BAZ1BQ9UIG0 1483 aaKnown RBP26.43■■□□□ 1.82
NTRK1-203ENST00000392302 SYNJ1O43426 1573 aa26.41■■□□□ 1.82
NTRK1-203ENST00000392302 RAPGEF2Q9Y4G8 1499 aa26.3■■□□□ 1.8
NTRK1-203ENST00000392302 SUPT16HQ9Y5B9 1047 aaKnown RBP26.29■■□□□ 1.8
NTRK1-203ENST00000392302 DHX57Q6P158 1386 aaKnown RBP26.27■■□□□ 1.8
NTRK1-203ENST00000392302 PEG3Q9GZU2 1588 aa26.25■■□□□ 1.79
NTRK1-203ENST00000392302 RANGAP1P46060 587 aaPredicted RBP26.23■■□□□ 1.79
NTRK1-203ENST00000392302 PABPN1Q86U42 306 aaKnown RBP eCLIP26.04■■□□□ 1.76
NTRK1-203ENST00000392302 BICRAQ9NZM4 1560 aa26.04■■□□□ 1.76
NTRK1-203ENST00000392302 ERICH3Q5RHP9 1530 aa26.03■■□□□ 1.76
NTRK1-203ENST00000392302 TSHZ2Q9NRE2 1034 aa26.03■■□□□ 1.76
NTRK1-203ENST00000392302 TOP2BQ02880 1626 aa26.03■■□□□ 1.76
NTRK1-203ENST00000392302 ARAP1Q96P48 1450 aa26.02■■□□□ 1.76
NTRK1-203ENST00000392302 RRBP1Q9P2E9 1410 aaKnown RBP26■■□□□ 1.75
NTRK1-203ENST00000392302 KANK4Q5T7N3 995 aaPredicted RBP25.99■■□□□ 1.75
NTRK1-203ENST00000392302 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
NTRK1-203ENST00000392302 CUX2O14529 1486 aa25.96■■□□□ 1.75
NTRK1-203ENST00000392302 PRXQ9BXM0 1461 aa25.94■■□□□ 1.74
NTRK1-203ENST00000392302 ANP32EQ9BTT0 268 aa25.93■■□□□ 1.74
NTRK1-203ENST00000392302 BIVM-ERCC5R4GMW8 1640 aa25.92■■□□□ 1.74
NTRK1-203ENST00000392302 CCNB3Q8WWL7 1395 aa25.88■■□□□ 1.73
NTRK1-203ENST00000392302 KCNH8Q96L42 1107 aa25.79■■□□□ 1.72
NTRK1-203ENST00000392302 ITGAEP38570 1179 aa25.78■■□□□ 1.72
NTRK1-203ENST00000392302 RAB3GAP2Q9H2M9 1393 aa25.74■■□□□ 1.71
NTRK1-203ENST00000392302 BCANQ96GW7 911 aa25.72■■□□□ 1.71
NTRK1-203ENST00000392302 KIF27Q86VH2 1401 aa25.71■■□□□ 1.71
NTRK1-203ENST00000392302 MAPKBP1O60336 1514 aa25.71■■□□□ 1.71
NTRK1-203ENST00000392302 FKBP8Q14318 412 aa25.7■■□□□ 1.71
NTRK1-203ENST00000392302 ARHGAP35Q9NRY4 1499 aa25.69■■□□□ 1.7
NTRK1-203ENST00000392302 DDX10Q13206 875 aaKnown RBP25.64■■□□□ 1.7
NTRK1-203ENST00000392302 NEFLP07196 543 aa25.63■■□□□ 1.69
NTRK1-203ENST00000392302 CUX1P39880 1505 aa25.62■■□□□ 1.69
NTRK1-203ENST00000392302 SETD5Q9C0A6 1442 aa25.61■■□□□ 1.69
NTRK1-203ENST00000392302 WDR97A6NE52 1622 aa25.59■■□□□ 1.69
NTRK1-203ENST00000392302 TIAM1Q13009 1591 aa25.56■■□□□ 1.68
NTRK1-203ENST00000392302 MAP3K1Q13233 1512 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms