RNA–Protein interactions for RNA: ENST00000403885.1

RAMP1-202, Transcript of receptor activity modifying protein 1, humanhuman

TSL 3 BASIC

Gene RAMP1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP1-202ENST00000403885 NISCHQ9Y2I1 1504 aa50.48■■■■■ 5.67
RAMP1-202ENST00000403885 CCDC180Q9P1Z9 1646 aa45.19■■■■■ 4.83
RAMP1-202ENST00000403885 ABCC9O60706 1549 aa44.76■■■■■ 4.76
RAMP1-202ENST00000403885 RB1CC1Q8TDY2 1594 aa42.87■■■■■ 4.45
RAMP1-202ENST00000403885 NACADO15069 1562 aa42.67■■■■■ 4.42
RAMP1-202ENST00000403885 DCAF8L2P0C7V8 631 aa42.43■■■■■ 4.38
RAMP1-202ENST00000403885 MYO15BQ96JP2 1530 aa42.25■■■■■ 4.35
RAMP1-202ENST00000403885 ZCCHC6Q5VYS8 1495 aaKnown RBP41.92■■■■■ 4.3
RAMP1-202ENST00000403885 DCAF1Q9Y4B6 1507 aa41.8■■■■■ 4.28
RAMP1-202ENST00000403885 UNC13AQ9UPW8 1703 aa41.75■■■■■ 4.27
RAMP1-202ENST00000403885 PABPN1Q86U42 306 aaKnown RBP eCLIP41.7■■■■■ 4.27
RAMP1-202ENST00000403885 DNAJC5BQ9UF47 199 aa41.6■■■■■ 4.25
RAMP1-202ENST00000403885 BICRAQ9NZM4 1560 aa41.49■■■■■ 4.23
RAMP1-202ENST00000403885 SHROOM4Q9ULL8 1493 aa41.19■■■■■ 4.18
RAMP1-202ENST00000403885 SCRIBQ14160 1630 aa41.1■■■■■ 4.17
RAMP1-202ENST00000403885 EIF4G1Q04637 1599 aaKnown RBP40.5■■■■■ 4.07
RAMP1-202ENST00000403885 CC2D2AQ9P2K1 1620 aa40.47■■■■■ 4.07
RAMP1-202ENST00000403885 CECR2Q9BXF3 1484 aa40.34■■■■■ 4.05
RAMP1-202ENST00000403885 NCAPD3P42695 1498 aa39.37■■■■□ 3.89
RAMP1-202ENST00000403885 SMARCA4P51532 1647 aa39.29■■■■□ 3.88
RAMP1-202ENST00000403885 ATAD2BQ9ULI0 1458 aa39.25■■■■□ 3.87
RAMP1-202ENST00000403885 SMARCA2P51531 1590 aa39.24■■■■□ 3.87
RAMP1-202ENST00000403885 BAZ1AQ9NRL2 1556 aaPredicted RBP39.21■■■■□ 3.87
RAMP1-202ENST00000403885 HMGXB3Q12766 1538 aa39.12■■■■□ 3.85
RAMP1-202ENST00000403885 PEG3Q9GZU2 1588 aa38.96■■■■□ 3.83
RAMP1-202ENST00000403885 BAZ1BQ9UIG0 1483 aaKnown RBP38.92■■■■□ 3.82
RAMP1-202ENST00000403885 MROH2BQ7Z745 1585 aa38.84■■■■□ 3.81
RAMP1-202ENST00000403885 ERCC6Q03468 1493 aa38.72■■■■□ 3.79
RAMP1-202ENST00000403885 CUX2O14529 1486 aa38.56■■■■□ 3.76
RAMP1-202ENST00000403885 NESP48681 1621 aa38.51■■■■□ 3.76
RAMP1-202ENST00000403885 LAMC3Q9Y6N6 1575 aa38.44■■■■□ 3.74
RAMP1-202ENST00000403885 WIZO95785 1651 aa38.36■■■■□ 3.73
RAMP1-202ENST00000403885 PDS5BQ9NTI5 1447 aa38.24■■■■□ 3.71
RAMP1-202ENST00000403885 RSF1Q96T23 1441 aaPredicted RBP38.2■■■■□ 3.71
RAMP1-202ENST00000403885 CADPSQ9ULU8 1353 aa38.19■■■■□ 3.7
RAMP1-202ENST00000403885 THOC2Q8NI27 1593 aaKnown RBP38.1■■■■□ 3.69
RAMP1-202ENST00000403885 DNAJC5Q9H3Z4 198 aa38.1■■■■□ 3.69
RAMP1-202ENST00000403885 KIF21AQ7Z4S6 1674 aa38.04■■■■□ 3.68
RAMP1-202ENST00000403885 TOP2AP11388 1531 aaKnown RBP38■■■■□ 3.67
RAMP1-202ENST00000403885 MRC2Q9UBG0 1479 aa37.84■■■■□ 3.65
RAMP1-202ENST00000403885 CFTRP13569 1480 aa37.82■■■■□ 3.64
RAMP1-202ENST00000403885 CEP164Q9UPV0 1460 aa37.77■■■■□ 3.64
RAMP1-202ENST00000403885 FANCD2Q9BXW9 1451 aa37.73■■■■□ 3.63
RAMP1-202ENST00000403885 WDR62O43379 1518 aa37.71■■■■□ 3.63
RAMP1-202ENST00000403885 CCDC88BA6NC98 1476 aa37.52■■■■□ 3.6
RAMP1-202ENST00000403885 PRDM2Q13029 1718 aa37.44■■■■□ 3.58
RAMP1-202ENST00000403885 URB2Q14146 1524 aaKnown RBP37.34■■■■□ 3.57
RAMP1-202ENST00000403885 ABCC8Q09428 1581 aa37.11■■■■□ 3.53
RAMP1-202ENST00000403885 TOPBP1Q92547 1522 aa37.04■■■■□ 3.52
RAMP1-202ENST00000403885 IFT140Q96RY7 1462 aa37.01■■■■□ 3.52
RAMP1-202ENST00000403885 DNMBPQ6XZF7 1577 aa36.95■■■■□ 3.51
RAMP1-202ENST00000403885 OSCARQ8IYS5 282 aa36.86■■■■□ 3.49
RAMP1-202ENST00000403885 ZNF608Q9ULD9 1512 aaPredicted RBP36.8■■■■□ 3.48
RAMP1-202ENST00000403885 SUPT5HO00267 1087 aaKnown RBP36.73■■■■□ 3.47
RAMP1-202ENST00000403885 POLA1P09884 1462 aaPredicted RBP36.68■■■■□ 3.46
RAMP1-202ENST00000403885 EIF4G3O43432 1585 aaKnown RBP36.66■■■■□ 3.46
RAMP1-202ENST00000403885 TARBP1Q13395 1621 aaKnown RBP36.66■■■■□ 3.46
RAMP1-202ENST00000403885 SOGA1O94964 1423 aa36.54■■■■□ 3.44
RAMP1-202ENST00000403885 AQRO60306 1485 aaKnown RBP eCLIP36.54■■■■□ 3.44
RAMP1-202ENST00000403885 TRIM41Q8WV44 630 aa36.51■■■■□ 3.44
RAMP1-202ENST00000403885 FGD5Q6ZNL6 1462 aa36.49■■■■□ 3.43
RAMP1-202ENST00000403885 CUX1P39880 1505 aa36.49■■■■□ 3.43
RAMP1-202ENST00000403885 RAD54L2Q9Y4B4 1467 aa36.48■■■■□ 3.43
RAMP1-202ENST00000403885 WDR97A6NE52 1622 aa36.45■■■■□ 3.42
RAMP1-202ENST00000403885 TDRD9Q8NDG6 1382 aaKnown RBP36.38■■■■□ 3.41
RAMP1-202ENST00000403885 CHD1O14646 1710 aa36.28■■■■□ 3.4
RAMP1-202ENST00000403885 FBLN2P98095 1184 aa36.27■■■■□ 3.4
RAMP1-202ENST00000403885 RIMBP3CA6NJZ7 1639 aa36.23■■■■□ 3.39
RAMP1-202ENST00000403885 RIMBP3BA6NNM3 1639 aa36.23■■■■□ 3.39
RAMP1-202ENST00000403885 RIMBP3Q9UFD9 1639 aa36.23■■■■□ 3.39
RAMP1-202ENST00000403885 GRIN2BQ13224 1484 aa36.21■■■■□ 3.39
RAMP1-202ENST00000403885 SNAPC4Q5SXM2 1469 aa36.2■■■■□ 3.39
RAMP1-202ENST00000403885 MAGI1Q96QZ7 1491 aaPredicted RBP36.2■■■■□ 3.39
RAMP1-202ENST00000403885 ARHGEF11O15085 1522 aa36.19■■■■□ 3.38
RAMP1-202ENST00000403885 ABCA10Q8WWZ4 1543 aa36.13■■■■□ 3.38
RAMP1-202ENST00000403885 CHMP7Q8WUX9 453 aaPredicted RBP36.11■■■■□ 3.37
RAMP1-202ENST00000403885 GAPVD1Q14C86 1478 aa36.11■■■■□ 3.37
RAMP1-202ENST00000403885 WRNQ14191 1432 aaPredicted RBP eCLIP36.1■■■■□ 3.37
RAMP1-202ENST00000403885 SYNJ2O15056 1496 aa36.05■■■■□ 3.36
RAMP1-202ENST00000403885 TOP2BQ02880 1626 aa36.05■■■■□ 3.36
RAMP1-202ENST00000403885 BIVM-ERCC5R4GMW8 1640 aa36.03■■■■□ 3.36
RAMP1-202ENST00000403885 ABCA5Q8WWZ7 1642 aa36.01■■■■□ 3.36
RAMP1-202ENST00000403885 PBRM1Q86U86 1689 aa36.01■■■■□ 3.36
RAMP1-202ENST00000403885 SYNJ1O43426 1573 aa36■■■■□ 3.35
RAMP1-202ENST00000403885 CLASP1Q7Z460 1538 aa35.93■■■■□ 3.34
RAMP1-202ENST00000403885 CYB5RLQ6IPT4 315 aa35.9■■■■□ 3.34
RAMP1-202ENST00000403885 ARAP1Q96P48 1450 aa35.83■■■■□ 3.33
RAMP1-202ENST00000403885 GRIN2AQ12879 1464 aa35.73■■■■□ 3.31
RAMP1-202ENST00000403885 ERICH3Q5RHP9 1530 aa35.73■■■■□ 3.31
RAMP1-202ENST00000403885 ADAMTS12P58397 1594 aa35.72■■■■□ 3.31
RAMP1-202ENST00000403885 FHAD1B1AJZ9 1412 aa35.69■■■■□ 3.3
RAMP1-202ENST00000403885 NUP160Q12769 1436 aa35.59■■■■□ 3.29
RAMP1-202ENST00000403885 CEP170Q5SW79 1584 aa35.52■■■■□ 3.28
RAMP1-202ENST00000403885 TRHP20396 242 aaPredicted RBP35.42■■■■□ 3.26
RAMP1-202ENST00000403885 KIF27Q86VH2 1401 aa35.4■■■■□ 3.26
RAMP1-202ENST00000403885 SHROOM2Q13796 1616 aa35.37■■■■□ 3.25
RAMP1-202ENST00000403885 ERCC6L2Q5T890 1561 aa35.3■■■■□ 3.24
RAMP1-202ENST00000403885 IGF1RP08069 1367 aa35.29■■■■□ 3.24
RAMP1-202ENST00000403885 CUL7Q14999 1698 aa35.27■■■■□ 3.24
RAMP1-202ENST00000403885 JPH4Q96JJ6 628 aa35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms