RNA–Protein interactions for RNA: ENST00000395569.8

MDK-204, Transcript of midkine, humanhuman

TSL 1 (best) BASIC

Gene MDK, Length 686 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDK-204ENST00000395569 NISCHQ9Y2I1 1504 aa51.86■■■■■ 5.89
MDK-204ENST00000395569 ABCC9O60706 1549 aa46.65■■■■■ 5.06
MDK-204ENST00000395569 CCDC180Q9P1Z9 1646 aa46.5■■■■■ 5.04
MDK-204ENST00000395569 RB1CC1Q8TDY2 1594 aa44.31■■■■■ 4.68
MDK-204ENST00000395569 DNAJC5BQ9UF47 199 aa44.01■■■■■ 4.64
MDK-204ENST00000395569 NACADO15069 1562 aa44.01■■■■■ 4.64
MDK-204ENST00000395569 DCAF8L2P0C7V8 631 aa43.73■■■■■ 4.59
MDK-204ENST00000395569 PABPN1Q86U42 306 aaKnown RBP eCLIP43.45■■■■■ 4.55
MDK-204ENST00000395569 MYO15BQ96JP2 1530 aa43.4■■■■■ 4.54
MDK-204ENST00000395569 UNC13AQ9UPW8 1703 aa43.39■■■■■ 4.54
MDK-204ENST00000395569 BICRAQ9NZM4 1560 aa43.16■■■■■ 4.5
MDK-204ENST00000395569 ZCCHC6Q5VYS8 1495 aaKnown RBP42.95■■■■■ 4.47
MDK-204ENST00000395569 DCAF1Q9Y4B6 1507 aa42.81■■■■■ 4.44
MDK-204ENST00000395569 SHROOM4Q9ULL8 1493 aa42.42■■■■■ 4.38
MDK-204ENST00000395569 SCRIBQ14160 1630 aa42.39■■■■■ 4.38
MDK-204ENST00000395569 CC2D2AQ9P2K1 1620 aa42.14■■■■■ 4.34
MDK-204ENST00000395569 EIF4G1Q04637 1599 aaKnown RBP42.02■■■■■ 4.32
MDK-204ENST00000395569 CECR2Q9BXF3 1484 aa42.02■■■■■ 4.32
MDK-204ENST00000395569 NCAPD3P42695 1498 aa40.69■■■■■ 4.1
MDK-204ENST00000395569 ATAD2BQ9ULI0 1458 aa40.55■■■■■ 4.08
MDK-204ENST00000395569 SMARCA4P51532 1647 aa40.45■■■■■ 4.07
MDK-204ENST00000395569 DNAJC5Q9H3Z4 198 aa40.37■■■■■ 4.05
MDK-204ENST00000395569 SMARCA2P51531 1590 aa40.35■■■■■ 4.05
MDK-204ENST00000395569 HMGXB3Q12766 1538 aa40.32■■■■■ 4.05
MDK-204ENST00000395569 CUX2O14529 1486 aa40.2■■■■■ 4.03
MDK-204ENST00000395569 BAZ1AQ9NRL2 1556 aaPredicted RBP40.2■■■■■ 4.03
MDK-204ENST00000395569 ERCC6Q03468 1493 aa40.19■■■■■ 4.02
MDK-204ENST00000395569 NESP48681 1621 aa40.1■■■■■ 4.01
MDK-204ENST00000395569 PEG3Q9GZU2 1588 aa40.09■■■■■ 4.01
MDK-204ENST00000395569 BAZ1BQ9UIG0 1483 aaKnown RBP40.07■■■■■ 4.01
MDK-204ENST00000395569 MROH2BQ7Z745 1585 aa39.99■■■■□ 3.99
MDK-204ENST00000395569 LAMC3Q9Y6N6 1575 aa39.72■■■■□ 3.95
MDK-204ENST00000395569 THOC2Q8NI27 1593 aaKnown RBP39.68■■■■□ 3.94
MDK-204ENST00000395569 KIF21AQ7Z4S6 1674 aa39.52■■■■□ 3.92
MDK-204ENST00000395569 WIZO95785 1651 aa39.48■■■■□ 3.91
MDK-204ENST00000395569 PDS5BQ9NTI5 1447 aa39.48■■■■□ 3.91
MDK-204ENST00000395569 CADPSQ9ULU8 1353 aa39.42■■■■□ 3.9
MDK-204ENST00000395569 MRC2Q9UBG0 1479 aa39.17■■■■□ 3.86
MDK-204ENST00000395569 RSF1Q96T23 1441 aaPredicted RBP39.13■■■■□ 3.85
MDK-204ENST00000395569 WDR62O43379 1518 aa39.1■■■■□ 3.85
MDK-204ENST00000395569 CFTRP13569 1480 aa38.97■■■■□ 3.83
MDK-204ENST00000395569 CEP164Q9UPV0 1460 aa38.97■■■■□ 3.83
MDK-204ENST00000395569 FANCD2Q9BXW9 1451 aa38.96■■■■□ 3.83
MDK-204ENST00000395569 TOP2AP11388 1531 aaKnown RBP38.94■■■■□ 3.82
MDK-204ENST00000395569 URB2Q14146 1524 aaKnown RBP38.69■■■■□ 3.78
MDK-204ENST00000395569 CCDC88BA6NC98 1476 aa38.55■■■■□ 3.76
MDK-204ENST00000395569 PRDM2Q13029 1718 aa38.49■■■■□ 3.75
MDK-204ENST00000395569 TRIM41Q8WV44 630 aa38.48■■■■□ 3.75
MDK-204ENST00000395569 OSCARQ8IYS5 282 aa38.36■■■■□ 3.73
MDK-204ENST00000395569 ZNF608Q9ULD9 1512 aaPredicted RBP38.24■■■■□ 3.71
MDK-204ENST00000395569 TOPBP1Q92547 1522 aa38.22■■■■□ 3.71
MDK-204ENST00000395569 IFT140Q96RY7 1462 aa38.22■■■■□ 3.71
MDK-204ENST00000395569 ABCC8Q09428 1581 aa38.06■■■■□ 3.68
MDK-204ENST00000395569 DNMBPQ6XZF7 1577 aa38.04■■■■□ 3.68
MDK-204ENST00000395569 EIF4G3O43432 1585 aaKnown RBP37.95■■■■□ 3.67
MDK-204ENST00000395569 TARBP1Q13395 1621 aaKnown RBP37.92■■■■□ 3.66
MDK-204ENST00000395569 RIMBP3CA6NJZ7 1639 aa37.9■■■■□ 3.66
MDK-204ENST00000395569 RIMBP3BA6NNM3 1639 aa37.9■■■■□ 3.66
MDK-204ENST00000395569 RIMBP3Q9UFD9 1639 aa37.9■■■■□ 3.66
MDK-204ENST00000395569 AQRO60306 1485 aaKnown RBP eCLIP37.86■■■■□ 3.651e-9■■■■■ 32.7
MDK-204ENST00000395569 POLA1P09884 1462 aaPredicted RBP37.84■■■■□ 3.65
MDK-204ENST00000395569 ARHGEF11O15085 1522 aa37.77■■■■□ 3.64
MDK-204ENST00000395569 RAD54L2Q9Y4B4 1467 aa37.73■■■■□ 3.63
MDK-204ENST00000395569 CHD1O14646 1710 aa37.69■■■■□ 3.62
MDK-204ENST00000395569 SOGA1O94964 1423 aa37.64■■■■□ 3.62
MDK-204ENST00000395569 TDRD9Q8NDG6 1382 aaKnown RBP37.61■■■■□ 3.61
MDK-204ENST00000395569 FGD5Q6ZNL6 1462 aa37.57■■■■□ 3.6
MDK-204ENST00000395569 CUX1P39880 1505 aa37.56■■■■□ 3.6
MDK-204ENST00000395569 FBLN2P98095 1184 aa37.54■■■■□ 3.6
MDK-204ENST00000395569 CYB5RLQ6IPT4 315 aa37.49■■■■□ 3.59
MDK-204ENST00000395569 SNAPC4Q5SXM2 1469 aa37.44■■■■□ 3.58
MDK-204ENST00000395569 ARAP1Q96P48 1450 aa37.43■■■■□ 3.58
MDK-204ENST00000395569 WDR97A6NE52 1622 aa37.43■■■■□ 3.58
MDK-204ENST00000395569 CLASP1Q7Z460 1538 aa37.31■■■■□ 3.56
MDK-204ENST00000395569 GRIN2BQ13224 1484 aa37.3■■■■□ 3.56
MDK-204ENST00000395569 MAGI1Q96QZ7 1491 aaPredicted RBP37.3■■■■□ 3.56
MDK-204ENST00000395569 CHMP7Q8WUX9 453 aaPredicted RBP37.26■■■■□ 3.56
MDK-204ENST00000395569 SUPT5HO00267 1087 aaKnown RBP37.25■■■■□ 3.55
MDK-204ENST00000395569 SYNJ2O15056 1496 aa37.2■■■■□ 3.54
MDK-204ENST00000395569 SYNJ1O43426 1573 aa37.18■■■■□ 3.54
MDK-204ENST00000395569 GAPVD1Q14C86 1478 aa37.17■■■■□ 3.54
MDK-204ENST00000395569 ABCA10Q8WWZ4 1543 aa37.15■■■■□ 3.54
MDK-204ENST00000395569 PBRM1Q86U86 1689 aa37.14■■■■□ 3.54
MDK-204ENST00000395569 ABCA5Q8WWZ7 1642 aa37.1■■■■□ 3.53
MDK-204ENST00000395569 TRHP20396 242 aaPredicted RBP37.04■■■■□ 3.52
MDK-204ENST00000395569 WRNQ14191 1432 aaPredicted RBP eCLIP36.93■■■■□ 3.5
MDK-204ENST00000395569 BIVM-ERCC5R4GMW8 1640 aa36.9■■■■□ 3.5
MDK-204ENST00000395569 TOP2BQ02880 1626 aa36.89■■■■□ 3.5
MDK-204ENST00000395569 GRIN2AQ12879 1464 aa36.84■■■■□ 3.49
MDK-204ENST00000395569 ADAMTS12P58397 1594 aa36.81■■■■□ 3.48
MDK-204ENST00000395569 ERCC6L2Q5T890 1561 aa36.77■■■■□ 3.48
MDK-204ENST00000395569 NUP160Q12769 1436 aa36.76■■■■□ 3.47
MDK-204ENST00000395569 CEP170Q5SW79 1584 aa36.75■■■■□ 3.47
MDK-204ENST00000395569 FHAD1B1AJZ9 1412 aa36.69■■■■□ 3.46
MDK-204ENST00000395569 ERICH3Q5RHP9 1530 aa36.64■■■■□ 3.46
MDK-204ENST00000395569 SHROOM2Q13796 1616 aa36.6■■■■□ 3.45
MDK-204ENST00000395569 PRG4Q92954 1404 aaPredicted RBP36.38■■■■□ 3.41
MDK-204ENST00000395569 JPH4Q96JJ6 628 aa36.37■■■■□ 3.41
MDK-204ENST00000395569 RUSC2Q8N2Y8 1516 aa36.29■■■■□ 3.4
MDK-204ENST00000395569 IGF1RP08069 1367 aa36.24■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms