RNA–Protein interactions for RNA: ENST00000261884.7

TRIP4-201, Transcript of thyroid hormone receptor interactor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIP4, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-201ENST00000261884 NISCHQ9Y2I1 1504 aa43.46■■■■■ 4.55
TRIP4-201ENST00000261884 CCDC180Q9P1Z9 1646 aa38.13■■■■□ 3.7
TRIP4-201ENST00000261884 ZCCHC6Q5VYS8 1495 aaKnown RBP36.44■■■■□ 3.42
TRIP4-201ENST00000261884 ABCC9O60706 1549 aa36.32■■■■□ 3.41
TRIP4-201ENST00000261884 DCAF1Q9Y4B6 1507 aa36.01■■■■□ 3.36
TRIP4-201ENST00000261884 DCAF8L2P0C7V8 631 aa35.92■■■■□ 3.34
TRIP4-201ENST00000261884 MYO15BQ96JP2 1530 aa35.78■■■■□ 3.32
TRIP4-201ENST00000261884 NACADO15069 1562 aa35.63■■■■□ 3.29
TRIP4-201ENST00000261884 RB1CC1Q8TDY2 1594 aa35.4■■■■□ 3.26
TRIP4-201ENST00000261884 SHROOM4Q9ULL8 1493 aa35.01■■■■□ 3.2
TRIP4-201ENST00000261884 SCRIBQ14160 1630 aa34.9■■■■□ 3.18
TRIP4-201ENST00000261884 UNC13AQ9UPW8 1703 aa34.55■■■■□ 3.12
TRIP4-201ENST00000261884 BICRAQ9NZM4 1560 aa34.27■■■■□ 3.08
TRIP4-201ENST00000261884 PABPN1Q86U42 306 aaKnown RBP eCLIP34.14■■■■□ 3.06
TRIP4-201ENST00000261884 CECR2Q9BXF3 1484 aa33.73■■■□□ 2.99
TRIP4-201ENST00000261884 BAZ1AQ9NRL2 1556 aaPredicted RBP33.62■■■□□ 2.97
TRIP4-201ENST00000261884 RSF1Q96T23 1441 aaPredicted RBP33.53■■■□□ 2.96
TRIP4-201ENST00000261884 SUPT5HO00267 1087 aaKnown RBP33.52■■■□□ 2.96
TRIP4-201ENST00000261884 MROH2BQ7Z745 1585 aa33.51■■■□□ 2.95
TRIP4-201ENST00000261884 SMARCA4P51532 1647 aa33.48■■■□□ 2.95
TRIP4-201ENST00000261884 EIF4G1Q04637 1599 aaKnown RBP33.31■■■□□ 2.92
TRIP4-201ENST00000261884 WIZO95785 1651 aa33.18■■■□□ 2.9
TRIP4-201ENST00000261884 PEG3Q9GZU2 1588 aa33.16■■■□□ 2.9
TRIP4-201ENST00000261884 SMARCA2P51531 1590 aa33.06■■■□□ 2.88
TRIP4-201ENST00000261884 ATAD2BQ9ULI0 1458 aa33.05■■■□□ 2.88
TRIP4-201ENST00000261884 TOP2AP11388 1531 aaKnown RBP32.92■■■□□ 2.86
TRIP4-201ENST00000261884 CC2D2AQ9P2K1 1620 aa32.89■■■□□ 2.86
TRIP4-201ENST00000261884 NCAPD3P42695 1498 aa32.87■■■□□ 2.85
TRIP4-201ENST00000261884 BAZ1BQ9UIG0 1483 aaKnown RBP32.85■■■□□ 2.85
TRIP4-201ENST00000261884 HMGXB3Q12766 1538 aa32.81■■■□□ 2.84
TRIP4-201ENST00000261884 CCDC88BA6NC98 1476 aa32.53■■■□□ 2.8
TRIP4-201ENST00000261884 DNAJC5BQ9UF47 199 aa32.36■■■□□ 2.77
TRIP4-201ENST00000261884 CFTRP13569 1480 aa32.02■■■□□ 2.72
TRIP4-201ENST00000261884 CADPSQ9ULU8 1353 aa31.99■■■□□ 2.71
TRIP4-201ENST00000261884 CHIC1Q5VXU3 224 aa31.89■■■□□ 2.7
TRIP4-201ENST00000261884 LAMC3Q9Y6N6 1575 aa31.83■■■□□ 2.69
TRIP4-201ENST00000261884 PRDM2Q13029 1718 aa31.79■■■□□ 2.68
TRIP4-201ENST00000261884 NESP48681 1621 aa31.74■■■□□ 2.67
TRIP4-201ENST00000261884 ABCC8Q09428 1581 aa31.66■■■□□ 2.66
TRIP4-201ENST00000261884 TRIM41Q8WV44 630 aa31.61■■■□□ 2.65
TRIP4-201ENST00000261884 FANCD2Q9BXW9 1451 aa31.61■■■□□ 2.65
TRIP4-201ENST00000261884 PDS5BQ9NTI5 1447 aa31.6■■■□□ 2.65
TRIP4-201ENST00000261884 WRNQ14191 1432 aaPredicted RBP eCLIP31.6■■■□□ 2.65
TRIP4-201ENST00000261884 CEP164Q9UPV0 1460 aa31.47■■■□□ 2.63
TRIP4-201ENST00000261884 SYNJ1O43426 1573 aa31.43■■■□□ 2.62
TRIP4-201ENST00000261884 TOP2BQ02880 1626 aa31.39■■■□□ 2.62
TRIP4-201ENST00000261884 CUX1P39880 1505 aa31.37■■■□□ 2.61
TRIP4-201ENST00000261884 KIF21AQ7Z4S6 1674 aa31.37■■■□□ 2.61
TRIP4-201ENST00000261884 BIVM-ERCC5R4GMW8 1640 aa31.35■■■□□ 2.61
TRIP4-201ENST00000261884 DNMBPQ6XZF7 1577 aa31.27■■■□□ 2.6
TRIP4-201ENST00000261884 ERCC6Q03468 1493 aa31.25■■■□□ 2.59
TRIP4-201ENST00000261884 TOPBP1Q92547 1522 aa31.22■■■□□ 2.59
TRIP4-201ENST00000261884 URB2Q14146 1524 aaKnown RBP31.21■■■□□ 2.59
TRIP4-201ENST00000261884 MRC2Q9UBG0 1479 aa31.19■■■□□ 2.58
TRIP4-201ENST00000261884 FGD5Q6ZNL6 1462 aa31.11■■■□□ 2.57
TRIP4-201ENST00000261884 WDR62O43379 1518 aa31.05■■■□□ 2.56
TRIP4-201ENST00000261884 POLA1P09884 1462 aaPredicted RBP31.04■■■□□ 2.56
TRIP4-201ENST00000261884 THOC2Q8NI27 1593 aaKnown RBP31.01■■■□□ 2.55
TRIP4-201ENST00000261884 SOGA1O94964 1423 aa31■■■□□ 2.55
TRIP4-201ENST00000261884 EEA1Q15075 1411 aa30.99■■■□□ 2.55
TRIP4-201ENST00000261884 FAM9AQ8IZU1 332 aaPredicted RBP30.91■■■□□ 2.54
TRIP4-201ENST00000261884 RAD54L2Q9Y4B4 1467 aa30.88■■■□□ 2.53
TRIP4-201ENST00000261884 RUSC2Q8N2Y8 1516 aa30.87■■■□□ 2.53
TRIP4-201ENST00000261884 ABCA10Q8WWZ4 1543 aa30.87■■■□□ 2.53
TRIP4-201ENST00000261884 KIF27Q86VH2 1401 aa30.87■■■□□ 2.53
TRIP4-201ENST00000261884 CUX2O14529 1486 aa30.83■■■□□ 2.53
TRIP4-201ENST00000261884 CSRNP3Q8WYN3 585 aa30.78■■■□□ 2.52
TRIP4-201ENST00000261884 TARBP1Q13395 1621 aaKnown RBP30.77■■■□□ 2.52
TRIP4-201ENST00000261884 IFT140Q96RY7 1462 aa30.76■■■□□ 2.51
TRIP4-201ENST00000261884 WDR97A6NE52 1622 aa30.76■■■□□ 2.51
TRIP4-201ENST00000261884 ABCA5Q8WWZ7 1642 aa30.63■■■□□ 2.49
TRIP4-201ENST00000261884 TDRD9Q8NDG6 1382 aaKnown RBP30.63■■■□□ 2.49
TRIP4-201ENST00000261884 IGF1RP08069 1367 aa30.59■■■□□ 2.49
TRIP4-201ENST00000261884 GAPVD1Q14C86 1478 aa30.59■■■□□ 2.49
TRIP4-201ENST00000261884 LOC105371045A0A1W2PR82 267 aa30.58■■■□□ 2.49
TRIP4-201ENST00000261884 KIF21BO75037 1637 aa30.55■■■□□ 2.48
TRIP4-201ENST00000261884 PRXQ9BXM0 1461 aa30.53■■■□□ 2.48
TRIP4-201ENST00000261884 ZNF608Q9ULD9 1512 aaPredicted RBP30.53■■■□□ 2.48
TRIP4-201ENST00000261884 ERICH3Q5RHP9 1530 aa30.52■■■□□ 2.48
TRIP4-201ENST00000261884 AQRO60306 1485 aaKnown RBP eCLIP30.5■■■□□ 2.471e-6■□□□□ 11
TRIP4-201ENST00000261884 GOLGA3Q08378 1498 aa30.48■■■□□ 2.47
TRIP4-201ENST00000261884 EIF4G3O43432 1585 aaKnown RBP30.45■■■□□ 2.47
TRIP4-201ENST00000261884 GRIN2BQ13224 1484 aa30.44■■■□□ 2.46
TRIP4-201ENST00000261884 CARMIL1Q5VZK9 1371 aa30.44■■■□□ 2.46
TRIP4-201ENST00000261884 EHMT2Q96KQ7 1210 aa30.43■■■□□ 2.46
TRIP4-201ENST00000261884 CUL7Q14999 1698 aa30.43■■■□□ 2.46
TRIP4-201ENST00000261884 RAPGEF2Q9Y4G8 1499 aa30.41■■■□□ 2.46
TRIP4-201ENST00000261884 HRCP23327 699 aa30.41■■■□□ 2.46
TRIP4-201ENST00000261884 PBRM1Q86U86 1689 aa30.4■■■□□ 2.46
TRIP4-201ENST00000261884 UBTFP17480 764 aaKnown RBP30.32■■■□□ 2.44
TRIP4-201ENST00000261884 TNIKQ9UKE5 1360 aa30.3■■■□□ 2.44
TRIP4-201ENST00000261884 FHAD1B1AJZ9 1412 aa30.27■■■□□ 2.44
TRIP4-201ENST00000261884 ADAMTS12P58397 1594 aa30.26■■■□□ 2.43
TRIP4-201ENST00000261884 MAGI1Q96QZ7 1491 aaPredicted RBP30.25■■■□□ 2.43
TRIP4-201ENST00000261884 SNAPC4Q5SXM2 1469 aa30.24■■■□□ 2.43
TRIP4-201ENST00000261884 SYNJ2O15056 1496 aa30.12■■■□□ 2.41
TRIP4-201ENST00000261884 CEP162Q5TB80 1403 aa30.09■■■□□ 2.41
TRIP4-201ENST00000261884 GRIN2AQ12879 1464 aa30.05■■■□□ 2.4
TRIP4-201ENST00000261884 CHMP7Q8WUX9 453 aaPredicted RBP30.04■■■□□ 2.4
TRIP4-201ENST00000261884 PCGF6Q9BYE7 350 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms