RNA–Protein interactions for RNA: ENST00000307266.7

COPS9-201, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 1 (best) BASIC

Gene COPS9, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-201ENST00000307266 NISCHQ9Y2I1 1504 aa47.63■■■■■ 5.22
COPS9-201ENST00000307266 CCDC180Q9P1Z9 1646 aa42.26■■■■■ 4.36
COPS9-201ENST00000307266 ABCC9O60706 1549 aa41.13■■■■■ 4.18
COPS9-201ENST00000307266 DCAF8L2P0C7V8 631 aa39.88■■■■□ 3.97
COPS9-201ENST00000307266 RB1CC1Q8TDY2 1594 aa39.72■■■■□ 3.95
COPS9-201ENST00000307266 ZCCHC6Q5VYS8 1495 aaKnown RBP39.71■■■■□ 3.95
COPS9-201ENST00000307266 NACADO15069 1562 aa39.69■■■■□ 3.94
COPS9-201ENST00000307266 MYO15BQ96JP2 1530 aa39.48■■■■□ 3.91
COPS9-201ENST00000307266 DCAF1Q9Y4B6 1507 aa39.41■■■■□ 3.9
COPS9-201ENST00000307266 UNC13AQ9UPW8 1703 aa38.69■■■■□ 3.78
COPS9-201ENST00000307266 SCRIBQ14160 1630 aa38.61■■■■□ 3.77
COPS9-201ENST00000307266 PABPN1Q86U42 306 aaKnown RBP eCLIP38.48■■■■□ 3.75
COPS9-201ENST00000307266 BICRAQ9NZM4 1560 aa38.35■■■■□ 3.73
COPS9-201ENST00000307266 SHROOM4Q9ULL8 1493 aa38.09■■■■□ 3.69
COPS9-201ENST00000307266 EIF4G1Q04637 1599 aaKnown RBP37.4■■■■□ 3.58
COPS9-201ENST00000307266 DNAJC5BQ9UF47 199 aa37.39■■■■□ 3.58
COPS9-201ENST00000307266 CC2D2AQ9P2K1 1620 aa37.18■■■■□ 3.54
COPS9-201ENST00000307266 CECR2Q9BXF3 1484 aa37.03■■■■□ 3.52
COPS9-201ENST00000307266 BAZ1AQ9NRL2 1556 aaPredicted RBP36.95■■■■□ 3.51
COPS9-201ENST00000307266 SMARCA4P51532 1647 aa36.92■■■■□ 3.5
COPS9-201ENST00000307266 MROH2BQ7Z745 1585 aa36.69■■■■□ 3.46
COPS9-201ENST00000307266 SMARCA2P51531 1590 aa36.68■■■■□ 3.46
COPS9-201ENST00000307266 ATAD2BQ9ULI0 1458 aa36.63■■■■□ 3.45
COPS9-201ENST00000307266 NCAPD3P42695 1498 aa36.57■■■■□ 3.45
COPS9-201ENST00000307266 PEG3Q9GZU2 1588 aa36.51■■■■□ 3.44
COPS9-201ENST00000307266 HMGXB3Q12766 1538 aa36.44■■■■□ 3.42
COPS9-201ENST00000307266 BAZ1BQ9UIG0 1483 aaKnown RBP36.43■■■■□ 3.42
COPS9-201ENST00000307266 RSF1Q96T23 1441 aaPredicted RBP36.37■■■■□ 3.41
COPS9-201ENST00000307266 WIZO95785 1651 aa36.32■■■■□ 3.41
COPS9-201ENST00000307266 TOP2AP11388 1531 aaKnown RBP35.99■■■■□ 3.35
COPS9-201ENST00000307266 SUPT5HO00267 1087 aaKnown RBP35.79■■■■□ 3.32
COPS9-201ENST00000307266 LAMC3Q9Y6N6 1575 aa35.63■■■■□ 3.29
COPS9-201ENST00000307266 NESP48681 1621 aa35.61■■■■□ 3.29
COPS9-201ENST00000307266 CADPSQ9ULU8 1353 aa35.56■■■■□ 3.28
COPS9-201ENST00000307266 CCDC88BA6NC98 1476 aa35.54■■■■□ 3.28
COPS9-201ENST00000307266 ERCC6Q03468 1493 aa35.54■■■■□ 3.28
COPS9-201ENST00000307266 PDS5BQ9NTI5 1447 aa35.42■■■■□ 3.26
COPS9-201ENST00000307266 CFTRP13569 1480 aa35.37■■■■□ 3.25
COPS9-201ENST00000307266 KIF21AQ7Z4S6 1674 aa35.23■■■■□ 3.23
COPS9-201ENST00000307266 FANCD2Q9BXW9 1451 aa35.17■■■■□ 3.22
COPS9-201ENST00000307266 PRDM2Q13029 1718 aa35.15■■■■□ 3.22
COPS9-201ENST00000307266 CEP164Q9UPV0 1460 aa35.14■■■■□ 3.22
COPS9-201ENST00000307266 THOC2Q8NI27 1593 aaKnown RBP35.01■■■■□ 3.2
COPS9-201ENST00000307266 MRC2Q9UBG0 1479 aa35.01■■■■□ 3.19
COPS9-201ENST00000307266 CUX2O14529 1486 aa34.98■■■■□ 3.19
COPS9-201ENST00000307266 WDR62O43379 1518 aa34.83■■■■□ 3.17
COPS9-201ENST00000307266 URB2Q14146 1524 aaKnown RBP34.75■■■■□ 3.15
COPS9-201ENST00000307266 ABCC8Q09428 1581 aa34.7■■■■□ 3.14
COPS9-201ENST00000307266 DNMBPQ6XZF7 1577 aa34.62■■■■□ 3.13
COPS9-201ENST00000307266 TOPBP1Q92547 1522 aa34.61■■■■□ 3.13
COPS9-201ENST00000307266 CUX1P39880 1505 aa34.41■■■■□ 3.1
COPS9-201ENST00000307266 IFT140Q96RY7 1462 aa34.37■■■■□ 3.09
COPS9-201ENST00000307266 WRNQ14191 1432 aaPredicted RBP eCLIP34.36■■■■□ 3.09
COPS9-201ENST00000307266 POLA1P09884 1462 aaPredicted RBP34.33■■■■□ 3.09
COPS9-201ENST00000307266 FGD5Q6ZNL6 1462 aa34.3■■■■□ 3.08
COPS9-201ENST00000307266 SOGA1O94964 1423 aa34.25■■■■□ 3.07
COPS9-201ENST00000307266 TOP2BQ02880 1626 aa34.22■■■■□ 3.07
COPS9-201ENST00000307266 BIVM-ERCC5R4GMW8 1640 aa34.2■■■■□ 3.07
COPS9-201ENST00000307266 SYNJ1O43426 1573 aa34.19■■■■□ 3.06
COPS9-201ENST00000307266 TARBP1Q13395 1621 aaKnown RBP34.18■■■■□ 3.06
COPS9-201ENST00000307266 RAD54L2Q9Y4B4 1467 aa34.17■■■■□ 3.06
COPS9-201ENST00000307266 ZNF608Q9ULD9 1512 aaPredicted RBP34.12■■■■□ 3.05
COPS9-201ENST00000307266 EIF4G3O43432 1585 aaKnown RBP34.04■■■■□ 3.04
COPS9-201ENST00000307266 TDRD9Q8NDG6 1382 aaKnown RBP34■■■■□ 3.03
COPS9-201ENST00000307266 AQRO60306 1485 aaKnown RBP eCLIP34■■■■□ 3.03
COPS9-201ENST00000307266 WDR97A6NE52 1622 aa33.99■■■■□ 3.03
COPS9-201ENST00000307266 ABCA10Q8WWZ4 1543 aa33.97■■■■□ 3.03
COPS9-201ENST00000307266 GAPVD1Q14C86 1478 aa33.85■■■■□ 3.01
COPS9-201ENST00000307266 GRIN2BQ13224 1484 aa33.82■■■■□ 3
COPS9-201ENST00000307266 TRIM41Q8WV44 630 aa33.81■■■■□ 3
COPS9-201ENST00000307266 ABCA5Q8WWZ7 1642 aa33.79■■■■□ 3
COPS9-201ENST00000307266 PBRM1Q86U86 1689 aa33.74■■■□□ 2.99
COPS9-201ENST00000307266 SNAPC4Q5SXM2 1469 aa33.71■■■□□ 2.99
COPS9-201ENST00000307266 MAGI1Q96QZ7 1491 aaPredicted RBP33.69■■■□□ 2.98
COPS9-201ENST00000307266 FBLN2P98095 1184 aa33.69■■■□□ 2.98
COPS9-201ENST00000307266 KIF27Q86VH2 1401 aa33.66■■■□□ 2.98
COPS9-201ENST00000307266 OSCARQ8IYS5 282 aa33.63■■■□□ 2.97
COPS9-201ENST00000307266 CHMP7Q8WUX9 453 aaPredicted RBP33.61■■■□□ 2.97
COPS9-201ENST00000307266 ERICH3Q5RHP9 1530 aa33.59■■■□□ 2.97
COPS9-201ENST00000307266 DNAJC5Q9H3Z4 198 aa33.58■■■□□ 2.97
COPS9-201ENST00000307266 CHD1O14646 1710 aa33.56■■■□□ 2.96
COPS9-201ENST00000307266 SYNJ2O15056 1496 aa33.56■■■□□ 2.96
COPS9-201ENST00000307266 FHAD1B1AJZ9 1412 aa33.47■■■□□ 2.95
COPS9-201ENST00000307266 ADAMTS12P58397 1594 aa33.47■■■□□ 2.95
COPS9-201ENST00000307266 CHIC1Q5VXU3 224 aa33.45■■■□□ 2.95
COPS9-201ENST00000307266 IGF1RP08069 1367 aa33.4■■■□□ 2.94
COPS9-201ENST00000307266 CUL7Q14999 1698 aa33.37■■■□□ 2.93
COPS9-201ENST00000307266 GRIN2AQ12879 1464 aa33.36■■■□□ 2.93
COPS9-201ENST00000307266 RUSC2Q8N2Y8 1516 aa33.29■■■□□ 2.92
COPS9-201ENST00000307266 CARMIL1Q5VZK9 1371 aa33.27■■■□□ 2.92
COPS9-201ENST00000307266 EEA1Q15075 1411 aa33.19■■■□□ 2.9
COPS9-201ENST00000307266 CLASP1Q7Z460 1538 aa33.16■■■□□ 2.9
COPS9-201ENST00000307266 NUP160Q12769 1436 aa33.15■■■□□ 2.9
COPS9-201ENST00000307266 CEP170Q5SW79 1584 aa33.14■■■□□ 2.9
COPS9-201ENST00000307266 RAPGEF2Q9Y4G8 1499 aa33.11■■■□□ 2.89
COPS9-201ENST00000307266 FAM9AQ8IZU1 332 aaPredicted RBP33.09■■■□□ 2.89
COPS9-201ENST00000307266 CSRNP3Q8WYN3 585 aa33.09■■■□□ 2.89
COPS9-201ENST00000307266 ARHGEF11O15085 1522 aa33.01■■■□□ 2.87
COPS9-201ENST00000307266 RIMBP3CA6NJZ7 1639 aa32.99■■■□□ 2.87
COPS9-201ENST00000307266 RIMBP3BA6NNM3 1639 aa32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms