RNA–Protein interactions for RNA: ENST00000258385.7

CHRND-201, Transcript of cholinergic receptor nicotinic delta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRND, Length 2,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRND-201ENST00000258385 NISCHQ9Y2I1 1504 aa39.11■■■■□ 3.85
CHRND-201ENST00000258385 CCDC180Q9P1Z9 1646 aa33.83■■■■□ 3.01
CHRND-201ENST00000258385 ZCCHC6Q5VYS8 1495 aaKnown RBP32.97■■■□□ 2.87
CHRND-201ENST00000258385 SHROOM4Q9ULL8 1493 aa32.71■■■□□ 2.83
CHRND-201ENST00000258385 DCAF8L2P0C7V8 631 aa32.3■■■□□ 2.76
CHRND-201ENST00000258385 DCAF1Q9Y4B6 1507 aa32.28■■■□□ 2.76
CHRND-201ENST00000258385 SUPT5HO00267 1087 aaKnown RBP32.08■■■□□ 2.73
CHRND-201ENST00000258385 MYO15BQ96JP2 1530 aa31.67■■■□□ 2.66
CHRND-201ENST00000258385 ABCC9O60706 1549 aa31.62■■■□□ 2.65
CHRND-201ENST00000258385 NACADO15069 1562 aa31.39■■■□□ 2.62
CHRND-201ENST00000258385 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
CHRND-201ENST00000258385 CHIC1Q5VXU3 224 aa31.27■■■□□ 2.6
CHRND-201ENST00000258385 RB1CC1Q8TDY2 1594 aa31.03■■■□□ 2.56
CHRND-201ENST00000258385 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
CHRND-201ENST00000258385 UNC13AQ9UPW8 1703 aa30.43■■■□□ 2.46
CHRND-201ENST00000258385 CECR2Q9BXF3 1484 aa30.38■■■□□ 2.45
CHRND-201ENST00000258385 HRCP23327 699 aa30.34■■■□□ 2.45
CHRND-201ENST00000258385 MROH2BQ7Z745 1585 aa30.27■■■□□ 2.44
CHRND-201ENST00000258385 PCGF6Q9BYE7 350 aa30.24■■■□□ 2.43
CHRND-201ENST00000258385 LOC105371045A0A1W2PR82 267 aa30.23■■■□□ 2.43
CHRND-201ENST00000258385 BAZ1AQ9NRL2 1556 aaPredicted RBP30.17■■■□□ 2.42
CHRND-201ENST00000258385 WIZO95785 1651 aa30.07■■■□□ 2.41
CHRND-201ENST00000258385 BICRAQ9NZM4 1560 aa30.06■■■□□ 2.4
CHRND-201ENST00000258385 SMARCA4P51532 1647 aa29.97■■■□□ 2.39
CHRND-201ENST00000258385 TRIM41Q8WV44 630 aa29.96■■■□□ 2.39
CHRND-201ENST00000258385 PABPN1Q86U42 306 aaKnown RBP eCLIP29.95■■■□□ 2.39
CHRND-201ENST00000258385 TRIM26Q12899 539 aaPredicted RBP29.78■■■□□ 2.36
CHRND-201ENST00000258385 TOP2AP11388 1531 aaKnown RBP29.75■■■□□ 2.35
CHRND-201ENST00000258385 FAM9AQ8IZU1 332 aaPredicted RBP29.6■■■□□ 2.33
CHRND-201ENST00000258385 PPARGC1BQ86YN6 1023 aaKnown RBP29.56■■■□□ 2.32
CHRND-201ENST00000258385 EIF4G1Q04637 1599 aaKnown RBP29.53■■■□□ 2.32
CHRND-201ENST00000258385 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
CHRND-201ENST00000258385 SMARCA2P51531 1590 aa29.49■■■□□ 2.31
CHRND-201ENST00000258385 CCDC88BA6NC98 1476 aa29.46■■■□□ 2.31
CHRND-201ENST00000258385 ATAD2BQ9ULI0 1458 aa29.33■■■□□ 2.29
CHRND-201ENST00000258385 EHMT2Q96KQ7 1210 aa29.26■■■□□ 2.27
CHRND-201ENST00000258385 BAZ1BQ9UIG0 1483 aaKnown RBP29.25■■■□□ 2.27
CHRND-201ENST00000258385 ZEB1P37275 1124 aaPredicted RBP29.21■■■□□ 2.27
CHRND-201ENST00000258385 ABCC8Q09428 1581 aa29.13■■■□□ 2.25
CHRND-201ENST00000258385 HMGXB3Q12766 1538 aa28.98■■■□□ 2.23
CHRND-201ENST00000258385 NCAPD3P42695 1498 aa28.95■■■□□ 2.23
CHRND-201ENST00000258385 EEA1Q15075 1411 aa28.87■■■□□ 2.21
CHRND-201ENST00000258385 SOGA1O94964 1423 aa28.82■■■□□ 2.2
CHRND-201ENST00000258385 WRNQ14191 1432 aaPredicted RBP eCLIP28.8■■■□□ 2.2
CHRND-201ENST00000258385 CEP162Q5TB80 1403 aa28.77■■■□□ 2.2
CHRND-201ENST00000258385 TNIKQ9UKE5 1360 aa28.75■■■□□ 2.19
CHRND-201ENST00000258385 CSRNP3Q8WYN3 585 aa28.67■■■□□ 2.18
CHRND-201ENST00000258385 RUSC2Q8N2Y8 1516 aa28.66■■■□□ 2.18
CHRND-201ENST00000258385 SYNJ1O43426 1573 aa28.65■■■□□ 2.18
CHRND-201ENST00000258385 GOLGA3Q08378 1498 aa28.61■■■□□ 2.17
CHRND-201ENST00000258385 CC2D2AQ9P2K1 1620 aa28.59■■■□□ 2.17
CHRND-201ENST00000258385 UBTFP17480 764 aaKnown RBP28.52■■■□□ 2.16
CHRND-201ENST00000258385 CFTRP13569 1480 aa28.48■■■□□ 2.15
CHRND-201ENST00000258385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.48■■■□□ 2.15
CHRND-201ENST00000258385 KIF21BO75037 1637 aa28.47■■■□□ 2.15
CHRND-201ENST00000258385 CCER1Q8TC90 406 aaPredicted RBP28.46■■■□□ 2.15
CHRND-201ENST00000258385 TOP2BQ02880 1626 aa28.46■■■□□ 2.15
CHRND-201ENST00000258385 CEP164Q9UPV0 1460 aa28.46■■■□□ 2.15
CHRND-201ENST00000258385 BIVM-ERCC5R4GMW8 1640 aa28.42■■■□□ 2.14
CHRND-201ENST00000258385 PRDM2Q13029 1718 aa28.39■■■□□ 2.13
CHRND-201ENST00000258385 TTBK1Q5TCY1 1321 aaPredicted RBP28.36■■■□□ 2.13
CHRND-201ENST00000258385 CADPSQ9ULU8 1353 aa28.29■■■□□ 2.12
CHRND-201ENST00000258385 CUX1P39880 1505 aa28.27■■■□□ 2.12
CHRND-201ENST00000258385 CLIP1P30622 1438 aa28.23■■■□□ 2.11
CHRND-201ENST00000258385 RAPGEF2Q9Y4G8 1499 aa28.17■■■□□ 2.1
CHRND-201ENST00000258385 VPS8Q8N3P4 1428 aa28.15■■■□□ 2.1
CHRND-201ENST00000258385 FANCD2Q9BXW9 1451 aa28.02■■■□□ 2.08
CHRND-201ENST00000258385 ERICH3Q5RHP9 1530 aa28.02■■■□□ 2.08
CHRND-201ENST00000258385 KIF27Q86VH2 1401 aa28.01■■■□□ 2.07
CHRND-201ENST00000258385 PRXQ9BXM0 1461 aa27.95■■■□□ 2.06
CHRND-201ENST00000258385 APLP2Q06481 763 aa27.94■■■□□ 2.06
CHRND-201ENST00000258385 NESP48681 1621 aa27.92■■■□□ 2.06
CHRND-201ENST00000258385 LAMC3Q9Y6N6 1575 aa27.91■■■□□ 2.06
CHRND-201ENST00000258385 DIEXFQ68CQ4 756 aaKnown RBP27.91■■■□□ 2.06
CHRND-201ENST00000258385 FGD5Q6ZNL6 1462 aa27.89■■■□□ 2.06
CHRND-201ENST00000258385 SCAF1Q9H7N4 1312 aaKnown RBP27.89■■■□□ 2.05
CHRND-201ENST00000258385 HNRNPUL2Q1KMD3 747 aaKnown RBP27.85■■■□□ 2.05
CHRND-201ENST00000258385 DNMBPQ6XZF7 1577 aa27.85■■■□□ 2.05
CHRND-201ENST00000258385 CUX2O14529 1486 aa27.84■■■□□ 2.05
CHRND-201ENST00000258385 RANGAP1P46060 587 aaPredicted RBP27.82■■■□□ 2.04
CHRND-201ENST00000258385 ARAP1Q96P48 1450 aa27.79■■■□□ 2.04
CHRND-201ENST00000258385 TOPBP1Q92547 1522 aa27.76■■■□□ 2.03
CHRND-201ENST00000258385 ZNF316A6NFI3 1004 aaPredicted RBP27.74■■■□□ 2.03
CHRND-201ENST00000258385 PDS5BQ9NTI5 1447 aa27.71■■■□□ 2.03
CHRND-201ENST00000258385 DNAJC5BQ9UF47 199 aa27.7■■■□□ 2.03
CHRND-201ENST00000258385 ACIN1Q9UKV3 1341 aaKnown RBP27.7■■■□□ 2.02
CHRND-201ENST00000258385 IGF1RP08069 1367 aa27.67■■■□□ 2.02
CHRND-201ENST00000258385 POLA1P09884 1462 aaPredicted RBP27.66■■■□□ 2.02
CHRND-201ENST00000258385 URB2Q14146 1524 aaKnown RBP27.62■■■□□ 2.01
CHRND-201ENST00000258385 ABCA10Q8WWZ4 1543 aa27.62■■■□□ 2.01
CHRND-201ENST00000258385 RAD54L2Q9Y4B4 1467 aa27.61■■■□□ 2.01
CHRND-201ENST00000258385 CENPBP07199 599 aaPredicted RBP27.61■■■□□ 2.01
CHRND-201ENST00000258385 NEUROD1Q13562 356 aa27.6■■■□□ 2.01
CHRND-201ENST00000258385 KIF21AQ7Z4S6 1674 aa27.58■■■□□ 2.01
CHRND-201ENST00000258385 CARMIL1Q5VZK9 1371 aa27.57■■■□□ 2
CHRND-201ENST00000258385 ARHGAP35Q9NRY4 1499 aa27.55■■■□□ 2
CHRND-201ENST00000258385 KANK4Q5T7N3 995 aaPredicted RBP27.51■■□□□ 1.99
CHRND-201ENST00000258385 RRBP1Q9P2E9 1410 aaKnown RBP27.5■■□□□ 1.99
CHRND-201ENST00000258385 CLSPNQ9HAW4 1339 aa27.49■■□□□ 1.99
CHRND-201ENST00000258385 WDR97A6NE52 1622 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms