RNA–Protein interactions for RNA: ENST00000639283.1

AC011416.4-201, humanhuman

TSL 5 BASIC

Gene AC011416.4, Length 2,195 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011416.4-201ENST00000639283 NISCHQ9Y2I1 1504 aa38.22■■■■□ 3.71
AC011416.4-201ENST00000639283 CCDC180Q9P1Z9 1646 aa32.54■■■□□ 2.8
AC011416.4-201ENST00000639283 SHROOM4Q9ULL8 1493 aa32.47■■■□□ 2.79
AC011416.4-201ENST00000639283 ZCCHC6Q5VYS8 1495 aaKnown RBP32.37■■■□□ 2.77
AC011416.4-201ENST00000639283 SUPT5HO00267 1087 aaKnown RBP31.88■■■□□ 2.69
AC011416.4-201ENST00000639283 DCAF1Q9Y4B6 1507 aa31.45■■■□□ 2.62
AC011416.4-201ENST00000639283 DCAF8L2P0C7V8 631 aa31.42■■■□□ 2.62
AC011416.4-201ENST00000639283 CHIC1Q5VXU3 224 aa31.14■■■□□ 2.58
AC011416.4-201ENST00000639283 MYO15BQ96JP2 1530 aa31.05■■■□□ 2.56
AC011416.4-201ENST00000639283 ABCC9O60706 1549 aa30.59■■■□□ 2.49
AC011416.4-201ENST00000639283 SCRIBQ14160 1630 aa30.38■■■□□ 2.45
AC011416.4-201ENST00000639283 HRCP23327 699 aa30.37■■■□□ 2.45
AC011416.4-201ENST00000639283 RSF1Q96T23 1441 aaPredicted RBP30.24■■■□□ 2.43
AC011416.4-201ENST00000639283 PCGF6Q9BYE7 350 aa30.21■■■□□ 2.43
AC011416.4-201ENST00000639283 LOC105371045A0A1W2PR82 267 aa30.13■■■□□ 2.41
AC011416.4-201ENST00000639283 NACADO15069 1562 aa30.02■■■□□ 2.4
AC011416.4-201ENST00000639283 RB1CC1Q8TDY2 1594 aa29.99■■■□□ 2.39
AC011416.4-201ENST00000639283 TRIM41Q8WV44 630 aa29.76■■■□□ 2.35
AC011416.4-201ENST00000639283 CECR2Q9BXF3 1484 aa29.73■■■□□ 2.35
AC011416.4-201ENST00000639283 TRIM26Q12899 539 aaPredicted RBP29.7■■■□□ 2.35
AC011416.4-201ENST00000639283 MROH2BQ7Z745 1585 aa29.67■■■□□ 2.34
AC011416.4-201ENST00000639283 PPARGC1BQ86YN6 1023 aaKnown RBP29.6■■■□□ 2.33
AC011416.4-201ENST00000639283 WIZO95785 1651 aa29.53■■■□□ 2.32
AC011416.4-201ENST00000639283 BAZ1AQ9NRL2 1556 aaPredicted RBP29.43■■■□□ 2.3
AC011416.4-201ENST00000639283 FAM9AQ8IZU1 332 aaPredicted RBP29.43■■■□□ 2.3
AC011416.4-201ENST00000639283 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.27
AC011416.4-201ENST00000639283 ZEB1P37275 1124 aaPredicted RBP29.15■■■□□ 2.26
AC011416.4-201ENST00000639283 TOP2AP11388 1531 aaKnown RBP29.13■■■□□ 2.25
AC011416.4-201ENST00000639283 SMARCA4P51532 1647 aa29.1■■■□□ 2.25
AC011416.4-201ENST00000639283 EHMT2Q96KQ7 1210 aa29.09■■■□□ 2.25
AC011416.4-201ENST00000639283 UNC13AQ9UPW8 1703 aa29.05■■■□□ 2.24
AC011416.4-201ENST00000639283 CCDC88BA6NC98 1476 aa28.95■■■□□ 2.22
AC011416.4-201ENST00000639283 SMARCA2P51531 1590 aa28.95■■■□□ 2.22
AC011416.4-201ENST00000639283 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
AC011416.4-201ENST00000639283 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
AC011416.4-201ENST00000639283 WRNQ14191 1432 aaPredicted RBP eCLIP28.63■■■□□ 2.17
AC011416.4-201ENST00000639283 SOGA1O94964 1423 aa28.61■■■□□ 2.17
AC011416.4-201ENST00000639283 EEA1Q15075 1411 aa28.61■■■□□ 2.17
AC011416.4-201ENST00000639283 PEG3Q9GZU2 1588 aa28.59■■■□□ 2.17
AC011416.4-201ENST00000639283 CEP162Q5TB80 1403 aa28.57■■■□□ 2.16
AC011416.4-201ENST00000639283 TNIKQ9UKE5 1360 aa28.55■■■□□ 2.16
AC011416.4-201ENST00000639283 PABPN1Q86U42 306 aaKnown RBP eCLIP28.52■■■□□ 2.16
AC011416.4-201ENST00000639283 CSRNP3Q8WYN3 585 aa28.47■■■□□ 2.15
AC011416.4-201ENST00000639283 RUSC2Q8N2Y8 1516 aa28.45■■■□□ 2.15
AC011416.4-201ENST00000639283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.41■■■□□ 2.14
AC011416.4-201ENST00000639283 GOLGA3Q08378 1498 aa28.38■■■□□ 2.13
AC011416.4-201ENST00000639283 CCER1Q8TC90 406 aaPredicted RBP28.37■■■□□ 2.13
AC011416.4-201ENST00000639283 UBTFP17480 764 aaKnown RBP28.31■■■□□ 2.12
AC011416.4-201ENST00000639283 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
AC011416.4-201ENST00000639283 SYNJ1O43426 1573 aa28.28■■■□□ 2.12
AC011416.4-201ENST00000639283 BAZ1BQ9UIG0 1483 aaKnown RBP28.22■■■□□ 2.11
AC011416.4-201ENST00000639283 KIF21BO75037 1637 aa28.22■■■□□ 2.11
AC011416.4-201ENST00000639283 TTBK1Q5TCY1 1321 aaPredicted RBP28.22■■■□□ 2.11
AC011416.4-201ENST00000639283 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
AC011416.4-201ENST00000639283 CLIP1P30622 1438 aa28.02■■■□□ 2.08
AC011416.4-201ENST00000639283 SCAF1Q9H7N4 1312 aaKnown RBP27.98■■■□□ 2.07
AC011416.4-201ENST00000639283 TOP2BQ02880 1626 aa27.97■■■□□ 2.07
AC011416.4-201ENST00000639283 VPS8Q8N3P4 1428 aa27.94■■■□□ 2.06
AC011416.4-201ENST00000639283 RAPGEF2Q9Y4G8 1499 aa27.94■■■□□ 2.06
AC011416.4-201ENST00000639283 BIVM-ERCC5R4GMW8 1640 aa27.89■■■□□ 2.06
AC011416.4-201ENST00000639283 DIEXFQ68CQ4 756 aaKnown RBP27.89■■■□□ 2.05
AC011416.4-201ENST00000639283 HMGXB3Q12766 1538 aa27.8■■■□□ 2.04
AC011416.4-201ENST00000639283 ERICH3Q5RHP9 1530 aa27.75■■■□□ 2.03
AC011416.4-201ENST00000639283 NCAPD3P42695 1498 aa27.75■■■□□ 2.03
AC011416.4-201ENST00000639283 ACIN1Q9UKV3 1341 aaKnown RBP27.74■■■□□ 2.03
AC011416.4-201ENST00000639283 APLP2Q06481 763 aa27.74■■■□□ 2.03
AC011416.4-201ENST00000639283 HNRNPUL2Q1KMD3 747 aaKnown RBP27.72■■■□□ 2.03
AC011416.4-201ENST00000639283 PRXQ9BXM0 1461 aa27.7■■■□□ 2.03
AC011416.4-201ENST00000639283 ZNF316A6NFI3 1004 aaPredicted RBP27.69■■■□□ 2.02
AC011416.4-201ENST00000639283 NEUROD1Q13562 356 aa27.65■■■□□ 2.02
AC011416.4-201ENST00000639283 PELP1Q8IZL8 1130 aaKnown RBP27.64■■■□□ 2.02
AC011416.4-201ENST00000639283 CUX1P39880 1505 aa27.64■■■□□ 2.01
AC011416.4-201ENST00000639283 RANGAP1P46060 587 aaPredicted RBP27.62■■■□□ 2.01
AC011416.4-201ENST00000639283 CENPBP07199 599 aaPredicted RBP27.59■■■□□ 2.01
AC011416.4-201ENST00000639283 ARAP1Q96P48 1450 aa27.58■■■□□ 2
AC011416.4-201ENST00000639283 CFTRP13569 1480 aa27.56■■■□□ 2
AC011416.4-201ENST00000639283 KIF27Q86VH2 1401 aa27.54■■■□□ 2
AC011416.4-201ENST00000639283 PRDM2Q13029 1718 aa27.42■■□□□ 1.98
AC011416.4-201ENST00000639283 GTF3C3Q9Y5Q9 886 aa27.38■■□□□ 1.97
AC011416.4-201ENST00000639283 CLSPNQ9HAW4 1339 aa27.36■■□□□ 1.97
AC011416.4-201ENST00000639283 KANK4Q5T7N3 995 aaPredicted RBP27.35■■□□□ 1.97
AC011416.4-201ENST00000639283 RRBP1Q9P2E9 1410 aaKnown RBP27.32■■□□□ 1.96
AC011416.4-201ENST00000639283 ARHGAP35Q9NRY4 1499 aa27.32■■□□□ 1.96
AC011416.4-201ENST00000639283 DHX57Q6P158 1386 aaKnown RBP27.3■■□□□ 1.96
AC011416.4-201ENST00000639283 MIER1Q8N108 512 aa27.25■■□□□ 1.95
AC011416.4-201ENST00000639283 CUX2O14529 1486 aa27.22■■□□□ 1.95
AC011416.4-201ENST00000639283 IGF1RP08069 1367 aa27.2■■□□□ 1.94
AC011416.4-201ENST00000639283 CADPSQ9ULU8 1353 aa27.2■■□□□ 1.94
AC011416.4-201ENST00000639283 CCNB3Q8WWL7 1395 aa27.16■■□□□ 1.94
AC011416.4-201ENST00000639283 YTHDC1Q96MU7 727 aaKnown RBP27.15■■□□□ 1.94
AC011416.4-201ENST00000639283 FGD5Q6ZNL6 1462 aa27.12■■□□□ 1.93
AC011416.4-201ENST00000639283 MAP3K1Q13233 1512 aa27.1■■□□□ 1.93
AC011416.4-201ENST00000639283 CARMIL1Q5VZK9 1371 aa27.08■■□□□ 1.93
AC011416.4-201ENST00000639283 TIAM1Q13009 1591 aa27.07■■□□□ 1.92
AC011416.4-201ENST00000639283 CC2D2AQ9P2K1 1620 aa26.96■■□□□ 1.91
AC011416.4-201ENST00000639283 LRRC9Q6ZRR7 1453 aa26.95■■□□□ 1.9
AC011416.4-201ENST00000639283 FANCD2Q9BXW9 1451 aa26.94■■□□□ 1.9
AC011416.4-201ENST00000639283 FHAD1B1AJZ9 1412 aa26.92■■□□□ 1.9
AC011416.4-201ENST00000639283 ITGAEP38570 1179 aa26.91■■□□□ 1.9
AC011416.4-201ENST00000639283 CFAP43Q8NDM7 1665 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms