RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 NISCHQ9Y2I1 1504 aa43.22■■■■■ 4.51
TM9SF1-203ENST00000524835 CCDC180Q9P1Z9 1646 aa37.5■■■■□ 3.59
TM9SF1-203ENST00000524835 ZCCHC6Q5VYS8 1495 aaKnown RBP36.4■■■■□ 3.42
TM9SF1-203ENST00000524835 DCAF1Q9Y4B6 1507 aa35.72■■■■□ 3.31
TM9SF1-203ENST00000524835 DCAF8L2P0C7V8 631 aa35.53■■■■□ 3.28
TM9SF1-203ENST00000524835 SHROOM4Q9ULL8 1493 aa35.51■■■■□ 3.27
TM9SF1-203ENST00000524835 ABCC9O60706 1549 aa35.21■■■■□ 3.23
TM9SF1-203ENST00000524835 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
TM9SF1-203ENST00000524835 NACADO15069 1562 aa34.85■■■■□ 3.17
TM9SF1-203ENST00000524835 SCRIBQ14160 1630 aa34.58■■■■□ 3.13
TM9SF1-203ENST00000524835 RB1CC1Q8TDY2 1594 aa34.47■■■■□ 3.11
TM9SF1-203ENST00000524835 SUPT5HO00267 1087 aaKnown RBP34.28■■■■□ 3.08
TM9SF1-203ENST00000524835 UNC13AQ9UPW8 1703 aa33.84■■■■□ 3.01
TM9SF1-203ENST00000524835 RSF1Q96T23 1441 aaPredicted RBP33.67■■■□□ 2.98
TM9SF1-203ENST00000524835 CECR2Q9BXF3 1484 aa33.59■■■□□ 2.97
TM9SF1-203ENST00000524835 BICRAQ9NZM4 1560 aa33.5■■■□□ 2.95
TM9SF1-203ENST00000524835 MROH2BQ7Z745 1585 aa33.43■■■□□ 2.94
TM9SF1-203ENST00000524835 BAZ1AQ9NRL2 1556 aaPredicted RBP33.33■■■□□ 2.93
TM9SF1-203ENST00000524835 PABPN1Q86U42 306 aaKnown RBP eCLIP33.27■■■□□ 2.92
TM9SF1-203ENST00000524835 WIZO95785 1651 aa33.17■■■□□ 2.9
TM9SF1-203ENST00000524835 SMARCA4P51532 1647 aa33.16■■■□□ 2.9
TM9SF1-203ENST00000524835 CHIC1Q5VXU3 224 aa33.01■■■□□ 2.88
TM9SF1-203ENST00000524835 TOP2AP11388 1531 aaKnown RBP32.81■■■□□ 2.84
TM9SF1-203ENST00000524835 PEG3Q9GZU2 1588 aa32.74■■■□□ 2.83
TM9SF1-203ENST00000524835 SMARCA2P51531 1590 aa32.54■■■□□ 2.8
TM9SF1-203ENST00000524835 ATAD2BQ9ULI0 1458 aa32.53■■■□□ 2.8
TM9SF1-203ENST00000524835 CCDC88BA6NC98 1476 aa32.49■■■□□ 2.79
TM9SF1-203ENST00000524835 EIF4G1Q04637 1599 aaKnown RBP32.45■■■□□ 2.79
TM9SF1-203ENST00000524835 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
TM9SF1-203ENST00000524835 TRIM41Q8WV44 630 aa32.19■■■□□ 2.74
TM9SF1-203ENST00000524835 NCAPD3P42695 1498 aa32.18■■■□□ 2.74
TM9SF1-203ENST00000524835 HMGXB3Q12766 1538 aa32.17■■■□□ 2.74
TM9SF1-203ENST00000524835 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
TM9SF1-203ENST00000524835 CC2D2AQ9P2K1 1620 aa31.87■■■□□ 2.69
TM9SF1-203ENST00000524835 LOC105371045A0A1W2PR82 267 aa31.77■■■□□ 2.68
TM9SF1-203ENST00000524835 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
TM9SF1-203ENST00000524835 FAM9AQ8IZU1 332 aaPredicted RBP31.64■■■□□ 2.66
TM9SF1-203ENST00000524835 CFTRP13569 1480 aa31.57■■■□□ 2.64
TM9SF1-203ENST00000524835 SYNJ1O43426 1573 aa31.56■■■□□ 2.64
TM9SF1-203ENST00000524835 PRDM2Q13029 1718 aa31.4■■■□□ 2.62
TM9SF1-203ENST00000524835 SOGA1O94964 1423 aa31.4■■■□□ 2.62
TM9SF1-203ENST00000524835 TOP2BQ02880 1626 aa31.37■■■□□ 2.61
TM9SF1-203ENST00000524835 CADPSQ9ULU8 1353 aa31.37■■■□□ 2.61
TM9SF1-203ENST00000524835 EEA1Q15075 1411 aa31.34■■■□□ 2.61
TM9SF1-203ENST00000524835 BIVM-ERCC5R4GMW8 1640 aa31.34■■■□□ 2.61
TM9SF1-203ENST00000524835 RUSC2Q8N2Y8 1516 aa31.28■■■□□ 2.6
TM9SF1-203ENST00000524835 CUX1P39880 1505 aa31.24■■■□□ 2.59
TM9SF1-203ENST00000524835 EHMT2Q96KQ7 1210 aa31.2■■■□□ 2.58
TM9SF1-203ENST00000524835 CSRNP3Q8WYN3 585 aa31.14■■■□□ 2.58
TM9SF1-203ENST00000524835 FANCD2Q9BXW9 1451 aa31.04■■■□□ 2.56
TM9SF1-203ENST00000524835 NESP48681 1621 aa31.04■■■□□ 2.56
TM9SF1-203ENST00000524835 DNAJC5BQ9UF47 199 aa31.03■■■□□ 2.56
TM9SF1-203ENST00000524835 LAMC3Q9Y6N6 1575 aa31.01■■■□□ 2.56
TM9SF1-203ENST00000524835 KIF21BO75037 1637 aa30.96■■■□□ 2.55
TM9SF1-203ENST00000524835 GOLGA3Q08378 1498 aa30.95■■■□□ 2.55
TM9SF1-203ENST00000524835 CEP164Q9UPV0 1460 aa30.92■■■□□ 2.54
TM9SF1-203ENST00000524835 TNIKQ9UKE5 1360 aa30.91■■■□□ 2.54
TM9SF1-203ENST00000524835 FGD5Q6ZNL6 1462 aa30.83■■■□□ 2.53
TM9SF1-203ENST00000524835 DNMBPQ6XZF7 1577 aa30.82■■■□□ 2.52
TM9SF1-203ENST00000524835 KIF27Q86VH2 1401 aa30.81■■■□□ 2.52
TM9SF1-203ENST00000524835 CEP162Q5TB80 1403 aa30.8■■■□□ 2.52
TM9SF1-203ENST00000524835 UBTFP17480 764 aaKnown RBP30.76■■■□□ 2.51
TM9SF1-203ENST00000524835 RAPGEF2Q9Y4G8 1499 aa30.75■■■□□ 2.51
TM9SF1-203ENST00000524835 TOPBP1Q92547 1522 aa30.75■■■□□ 2.51
TM9SF1-203ENST00000524835 PDS5BQ9NTI5 1447 aa30.75■■■□□ 2.51
TM9SF1-203ENST00000524835 PRXQ9BXM0 1461 aa30.72■■■□□ 2.51
TM9SF1-203ENST00000524835 ERICH3Q5RHP9 1530 aa30.69■■■□□ 2.5
TM9SF1-203ENST00000524835 CUX2O14529 1486 aa30.68■■■□□ 2.5
TM9SF1-203ENST00000524835 URB2Q14146 1524 aaKnown RBP30.67■■■□□ 2.5
TM9SF1-203ENST00000524835 KIF21AQ7Z4S6 1674 aa30.65■■■□□ 2.5
TM9SF1-203ENST00000524835 POLA1P09884 1462 aaPredicted RBP30.64■■■□□ 2.5
TM9SF1-203ENST00000524835 PCGF6Q9BYE7 350 aa30.63■■■□□ 2.49
TM9SF1-203ENST00000524835 ABCA10Q8WWZ4 1543 aa30.55■■■□□ 2.48
TM9SF1-203ENST00000524835 RAD54L2Q9Y4B4 1467 aa30.54■■■□□ 2.48
TM9SF1-203ENST00000524835 IGF1RP08069 1367 aa30.53■■■□□ 2.48
TM9SF1-203ENST00000524835 TRIM26Q12899 539 aaPredicted RBP30.53■■■□□ 2.48
TM9SF1-203ENST00000524835 CLIP1P30622 1438 aa30.47■■■□□ 2.47
TM9SF1-203ENST00000524835 WDR97A6NE52 1622 aa30.44■■■□□ 2.46
TM9SF1-203ENST00000524835 MRC2Q9UBG0 1479 aa30.37■■■□□ 2.45
TM9SF1-203ENST00000524835 CARMIL1Q5VZK9 1371 aa30.36■■■□□ 2.45
TM9SF1-203ENST00000524835 ABCA5Q8WWZ7 1642 aa30.3■■■□□ 2.44
TM9SF1-203ENST00000524835 TARBP1Q13395 1621 aaKnown RBP30.28■■■□□ 2.44
TM9SF1-203ENST00000524835 VPS8Q8N3P4 1428 aa30.26■■■□□ 2.43
TM9SF1-203ENST00000524835 PPARGC1BQ86YN6 1023 aaKnown RBP30.26■■■□□ 2.43
TM9SF1-203ENST00000524835 CUL7Q14999 1698 aa30.25■■■□□ 2.43
TM9SF1-203ENST00000524835 WDR62O43379 1518 aa30.21■■■□□ 2.43
TM9SF1-203ENST00000524835 TDRD9Q8NDG6 1382 aaKnown RBP30.2■■■□□ 2.43
TM9SF1-203ENST00000524835 RANGAP1P46060 587 aaPredicted RBP30.19■■■□□ 2.42
TM9SF1-203ENST00000524835 GAPVD1Q14C86 1478 aa30.18■■■□□ 2.42
TM9SF1-203ENST00000524835 ARAP1Q96P48 1450 aa30.17■■■□□ 2.42
TM9SF1-203ENST00000524835 ERCC6Q03468 1493 aa30.12■■■□□ 2.41
TM9SF1-203ENST00000524835 ARHGAP35Q9NRY4 1499 aa30.1■■■□□ 2.41
TM9SF1-203ENST00000524835 THOC2Q8NI27 1593 aaKnown RBP30.06■■■□□ 2.4
TM9SF1-203ENST00000524835 IFT140Q96RY7 1462 aa30.03■■■□□ 2.4
TM9SF1-203ENST00000524835 HRCP23327 699 aa30.03■■■□□ 2.4
TM9SF1-203ENST00000524835 PBRM1Q86U86 1689 aa30■■■□□ 2.39
TM9SF1-203ENST00000524835 CTTNBP2Q8WZ74 1663 aa29.97■■■□□ 2.39
TM9SF1-203ENST00000524835 AQRO60306 1485 aaKnown RBP eCLIP29.96■■■□□ 2.39
TM9SF1-203ENST00000524835 TTBK1Q5TCY1 1321 aaPredicted RBP29.94■■■□□ 2.38
TM9SF1-203ENST00000524835 ZNF608Q9ULD9 1512 aaPredicted RBP29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms