RNA–Protein interactions for RNA: ENST00000550600.5

KRT18-207, Transcript of keratin 18, humanhuman

TSL 1 (best) BASIC

Gene KRT18, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-207ENST00000550600 NISCHQ9Y2I1 1504 aa43.73■■■■■ 4.59
KRT18-207ENST00000550600 CCDC180Q9P1Z9 1646 aa38.12■■■■□ 3.69
KRT18-207ENST00000550600 ZCCHC6Q5VYS8 1495 aaKnown RBP36.75■■■■□ 3.47
KRT18-207ENST00000550600 DCAF1Q9Y4B6 1507 aa36.26■■■■□ 3.4
KRT18-207ENST00000550600 DCAF8L2P0C7V8 631 aa36■■■■□ 3.35
KRT18-207ENST00000550600 MYO15BQ96JP2 1530 aa35.81■■■■□ 3.32
KRT18-207ENST00000550600 ABCC9O60706 1549 aa35.75■■■■□ 3.31
KRT18-207ENST00000550600 SHROOM4Q9ULL8 1493 aa35.6■■■■□ 3.29
KRT18-207ENST00000550600 NACADO15069 1562 aa35.49■■■■□ 3.27
KRT18-207ENST00000550600 RB1CC1Q8TDY2 1594 aa35.12■■■■□ 3.21
KRT18-207ENST00000550600 SCRIBQ14160 1630 aa34.92■■■■□ 3.18
KRT18-207ENST00000550600 SUPT5HO00267 1087 aaKnown RBP34.42■■■■□ 3.1
KRT18-207ENST00000550600 UNC13AQ9UPW8 1703 aa34.29■■■■□ 3.08
KRT18-207ENST00000550600 RSF1Q96T23 1441 aaPredicted RBP33.95■■■■□ 3.03
KRT18-207ENST00000550600 BICRAQ9NZM4 1560 aa33.93■■■■□ 3.02
KRT18-207ENST00000550600 CECR2Q9BXF3 1484 aa33.85■■■■□ 3.01
KRT18-207ENST00000550600 BAZ1AQ9NRL2 1556 aaPredicted RBP33.8■■■■□ 3
KRT18-207ENST00000550600 PABPN1Q86U42 306 aaKnown RBP eCLIP33.72■■■□□ 2.99
KRT18-207ENST00000550600 MROH2BQ7Z745 1585 aa33.71■■■□□ 2.99
KRT18-207ENST00000550600 SMARCA4P51532 1647 aa33.56■■■□□ 2.96
KRT18-207ENST00000550600 WIZO95785 1651 aa33.43■■■□□ 2.94
KRT18-207ENST00000550600 PEG3Q9GZU2 1588 aa33.21■■■□□ 2.91
KRT18-207ENST00000550600 TOP2AP11388 1531 aaKnown RBP33.18■■■□□ 2.9
KRT18-207ENST00000550600 CHIC1Q5VXU3 224 aa33.09■■■□□ 2.89
KRT18-207ENST00000550600 SMARCA2P51531 1590 aa33.04■■■□□ 2.88
KRT18-207ENST00000550600 ATAD2BQ9ULI0 1458 aa32.98■■■□□ 2.87
KRT18-207ENST00000550600 EIF4G1Q04637 1599 aaKnown RBP32.94■■■□□ 2.86
KRT18-207ENST00000550600 BAZ1BQ9UIG0 1483 aaKnown RBP32.82■■■□□ 2.84
KRT18-207ENST00000550600 CCDC88BA6NC98 1476 aa32.81■■■□□ 2.84
KRT18-207ENST00000550600 NCAPD3P42695 1498 aa32.73■■■□□ 2.83
KRT18-207ENST00000550600 HMGXB3Q12766 1538 aa32.69■■■□□ 2.82
KRT18-207ENST00000550600 TRIM41Q8WV44 630 aa32.46■■■□□ 2.79
KRT18-207ENST00000550600 CC2D2AQ9P2K1 1620 aa32.4■■■□□ 2.78
KRT18-207ENST00000550600 ABCC8Q09428 1581 aa32.08■■■□□ 2.73
KRT18-207ENST00000550600 CFTRP13569 1480 aa32.02■■■□□ 2.72
KRT18-207ENST00000550600 WRNQ14191 1432 aaPredicted RBP eCLIP31.99■■■□□ 2.71
KRT18-207ENST00000550600 CADPSQ9ULU8 1353 aa31.9■■■□□ 2.7
KRT18-207ENST00000550600 PRDM2Q13029 1718 aa31.88■■■□□ 2.69
KRT18-207ENST00000550600 SYNJ1O43426 1573 aa31.76■■■□□ 2.67
KRT18-207ENST00000550600 EEA1Q15075 1411 aa31.74■■■□□ 2.67
KRT18-207ENST00000550600 LOC105371045A0A1W2PR82 267 aa31.73■■■□□ 2.67
KRT18-207ENST00000550600 FAM9AQ8IZU1 332 aaPredicted RBP31.73■■■□□ 2.67
KRT18-207ENST00000550600 TOP2BQ02880 1626 aa31.71■■■□□ 2.67
KRT18-207ENST00000550600 BIVM-ERCC5R4GMW8 1640 aa31.67■■■□□ 2.66
KRT18-207ENST00000550600 LAMC3Q9Y6N6 1575 aa31.6■■■□□ 2.65
KRT18-207ENST00000550600 SOGA1O94964 1423 aa31.55■■■□□ 2.64
KRT18-207ENST00000550600 CUX1P39880 1505 aa31.52■■■□□ 2.64
KRT18-207ENST00000550600 FANCD2Q9BXW9 1451 aa31.5■■■□□ 2.63
KRT18-207ENST00000550600 CSRNP3Q8WYN3 585 aa31.47■■■□□ 2.63
KRT18-207ENST00000550600 NESP48681 1621 aa31.4■■■□□ 2.62
KRT18-207ENST00000550600 PDS5BQ9NTI5 1447 aa31.38■■■□□ 2.61
KRT18-207ENST00000550600 RUSC2Q8N2Y8 1516 aa31.37■■■□□ 2.61
KRT18-207ENST00000550600 DNAJC5BQ9UF47 199 aa31.35■■■□□ 2.61
KRT18-207ENST00000550600 CEP164Q9UPV0 1460 aa31.31■■■□□ 2.6
KRT18-207ENST00000550600 DNMBPQ6XZF7 1577 aa31.27■■■□□ 2.6
KRT18-207ENST00000550600 KIF27Q86VH2 1401 aa31.22■■■□□ 2.59
KRT18-207ENST00000550600 KIF21BO75037 1637 aa31.22■■■□□ 2.59
KRT18-207ENST00000550600 GOLGA3Q08378 1498 aa31.21■■■□□ 2.59
KRT18-207ENST00000550600 FGD5Q6ZNL6 1462 aa31.18■■■□□ 2.58
KRT18-207ENST00000550600 TNIKQ9UKE5 1360 aa31.17■■■□□ 2.58
KRT18-207ENST00000550600 TOPBP1Q92547 1522 aa31.16■■■□□ 2.58
KRT18-207ENST00000550600 EHMT2Q96KQ7 1210 aa31.16■■■□□ 2.58
KRT18-207ENST00000550600 KIF21AQ7Z4S6 1674 aa31.07■■■□□ 2.56
KRT18-207ENST00000550600 UBTFP17480 764 aaKnown RBP31.06■■■□□ 2.56
KRT18-207ENST00000550600 URB2Q14146 1524 aaKnown RBP31.04■■■□□ 2.56
KRT18-207ENST00000550600 CUX2O14529 1486 aa31.02■■■□□ 2.56
KRT18-207ENST00000550600 ERICH3Q5RHP9 1530 aa31.01■■■□□ 2.56
KRT18-207ENST00000550600 POLA1P09884 1462 aaPredicted RBP31.01■■■□□ 2.55
KRT18-207ENST00000550600 PRXQ9BXM0 1461 aa31■■■□□ 2.55
KRT18-207ENST00000550600 ABCA10Q8WWZ4 1543 aa30.97■■■□□ 2.55
KRT18-207ENST00000550600 CEP162Q5TB80 1403 aa30.93■■■□□ 2.54
KRT18-207ENST00000550600 RAPGEF2Q9Y4G8 1499 aa30.92■■■□□ 2.54
KRT18-207ENST00000550600 MRC2Q9UBG0 1479 aa30.9■■■□□ 2.54
KRT18-207ENST00000550600 IGF1RP08069 1367 aa30.87■■■□□ 2.53
KRT18-207ENST00000550600 RAD54L2Q9Y4B4 1467 aa30.85■■■□□ 2.53
KRT18-207ENST00000550600 WDR97A6NE52 1622 aa30.79■■■□□ 2.52
KRT18-207ENST00000550600 CARMIL1Q5VZK9 1371 aa30.75■■■□□ 2.51
KRT18-207ENST00000550600 ERCC6Q03468 1493 aa30.72■■■□□ 2.51
KRT18-207ENST00000550600 WDR62O43379 1518 aa30.71■■■□□ 2.51
KRT18-207ENST00000550600 CLIP1P30622 1438 aa30.7■■■□□ 2.5
KRT18-207ENST00000550600 TARBP1Q13395 1621 aaKnown RBP30.67■■■□□ 2.5
KRT18-207ENST00000550600 CUL7Q14999 1698 aa30.67■■■□□ 2.5
KRT18-207ENST00000550600 ABCA5Q8WWZ7 1642 aa30.65■■■□□ 2.5
KRT18-207ENST00000550600 GAPVD1Q14C86 1478 aa30.62■■■□□ 2.49
KRT18-207ENST00000550600 TRIM26Q12899 539 aaPredicted RBP30.6■■■□□ 2.49
KRT18-207ENST00000550600 IFT140Q96RY7 1462 aa30.58■■■□□ 2.49
KRT18-207ENST00000550600 TDRD9Q8NDG6 1382 aaKnown RBP30.57■■■□□ 2.48
KRT18-207ENST00000550600 THOC2Q8NI27 1593 aaKnown RBP30.53■■■□□ 2.48
KRT18-207ENST00000550600 PCGF6Q9BYE7 350 aa30.49■■■□□ 2.47
KRT18-207ENST00000550600 VPS8Q8N3P4 1428 aa30.46■■■□□ 2.47
KRT18-207ENST00000550600 PBRM1Q86U86 1689 aa30.4■■■□□ 2.46
KRT18-207ENST00000550600 GRIN2BQ13224 1484 aa30.39■■■□□ 2.45
KRT18-207ENST00000550600 AQRO60306 1485 aaKnown RBP eCLIP30.35■■■□□ 2.452e-7■■■■□ 21.9
KRT18-207ENST00000550600 RANGAP1P46060 587 aaPredicted RBP30.34■■■□□ 2.45
KRT18-207ENST00000550600 FHAD1B1AJZ9 1412 aa30.33■■■□□ 2.45
KRT18-207ENST00000550600 CTTNBP2Q8WZ74 1663 aa30.3■■■□□ 2.44
KRT18-207ENST00000550600 ARAP1Q96P48 1450 aa30.3■■■□□ 2.44
KRT18-207ENST00000550600 ARHGAP35Q9NRY4 1499 aa30.29■■■□□ 2.44
KRT18-207ENST00000550600 APLP2Q06481 763 aa30.27■■■□□ 2.44
KRT18-207ENST00000550600 ZNF608Q9ULD9 1512 aaPredicted RBP30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms