RNA–Protein interactions for RNA: ENST00000477703.5

SMIM4-203, Transcript of small integral membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM4, Length 1,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-203ENST00000477703 NISCHQ9Y2I1 1504 aa42.9■■■■■ 4.46
SMIM4-203ENST00000477703 CCDC180Q9P1Z9 1646 aa37.13■■■■□ 3.53
SMIM4-203ENST00000477703 ZCCHC6Q5VYS8 1495 aaKnown RBP36.1■■■■□ 3.37
SMIM4-203ENST00000477703 DCAF1Q9Y4B6 1507 aa35.42■■■■□ 3.26
SMIM4-203ENST00000477703 SHROOM4Q9ULL8 1493 aa35.34■■■■□ 3.25
SMIM4-203ENST00000477703 DCAF8L2P0C7V8 631 aa35.34■■■■□ 3.25
SMIM4-203ENST00000477703 ABCC9O60706 1549 aa34.85■■■■□ 3.17
SMIM4-203ENST00000477703 MYO15BQ96JP2 1530 aa34.83■■■■□ 3.17
SMIM4-203ENST00000477703 NACADO15069 1562 aa34.51■■■■□ 3.11
SMIM4-203ENST00000477703 SCRIBQ14160 1630 aa34.28■■■■□ 3.08
SMIM4-203ENST00000477703 SUPT5HO00267 1087 aaKnown RBP34.2■■■■□ 3.07
SMIM4-203ENST00000477703 RB1CC1Q8TDY2 1594 aa34.1■■■■□ 3.05
SMIM4-203ENST00000477703 UNC13AQ9UPW8 1703 aa33.57■■■□□ 2.96
SMIM4-203ENST00000477703 RSF1Q96T23 1441 aaPredicted RBP33.47■■■□□ 2.95
SMIM4-203ENST00000477703 CECR2Q9BXF3 1484 aa33.37■■■□□ 2.93
SMIM4-203ENST00000477703 MROH2BQ7Z745 1585 aa33.2■■■□□ 2.91
SMIM4-203ENST00000477703 BICRAQ9NZM4 1560 aa33.19■■■□□ 2.9
SMIM4-203ENST00000477703 BAZ1AQ9NRL2 1556 aaPredicted RBP33.03■■■□□ 2.88
SMIM4-203ENST00000477703 PABPN1Q86U42 306 aaKnown RBP eCLIP33.01■■■□□ 2.87
SMIM4-203ENST00000477703 CHIC1Q5VXU3 224 aa32.98■■■□□ 2.87
SMIM4-203ENST00000477703 WIZO95785 1651 aa32.96■■■□□ 2.87
SMIM4-203ENST00000477703 SMARCA4P51532 1647 aa32.87■■■□□ 2.85
SMIM4-203ENST00000477703 TOP2AP11388 1531 aaKnown RBP32.54■■■□□ 2.8
SMIM4-203ENST00000477703 PEG3Q9GZU2 1588 aa32.45■■■□□ 2.78
SMIM4-203ENST00000477703 SMARCA2P51531 1590 aa32.3■■■□□ 2.76
SMIM4-203ENST00000477703 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
SMIM4-203ENST00000477703 ATAD2BQ9ULI0 1458 aa32.26■■■□□ 2.75
SMIM4-203ENST00000477703 EIF4G1Q04637 1599 aaKnown RBP32.2■■■□□ 2.75
SMIM4-203ENST00000477703 TRIM41Q8WV44 630 aa32.08■■■□□ 2.73
SMIM4-203ENST00000477703 BAZ1BQ9UIG0 1483 aaKnown RBP32.05■■■□□ 2.72
SMIM4-203ENST00000477703 NCAPD3P42695 1498 aa31.9■■■□□ 2.7
SMIM4-203ENST00000477703 HMGXB3Q12766 1538 aa31.84■■■□□ 2.69
SMIM4-203ENST00000477703 LOC105371045A0A1W2PR82 267 aa31.8■■■□□ 2.68
SMIM4-203ENST00000477703 ABCC8Q09428 1581 aa31.75■■■□□ 2.67
SMIM4-203ENST00000477703 FAM9AQ8IZU1 332 aaPredicted RBP31.56■■■□□ 2.64
SMIM4-203ENST00000477703 CC2D2AQ9P2K1 1620 aa31.54■■■□□ 2.64
SMIM4-203ENST00000477703 WRNQ14191 1432 aaPredicted RBP eCLIP31.43■■■□□ 2.62
SMIM4-203ENST00000477703 SYNJ1O43426 1573 aa31.34■■■□□ 2.61
SMIM4-203ENST00000477703 CFTRP13569 1480 aa31.31■■■□□ 2.6
SMIM4-203ENST00000477703 SOGA1O94964 1423 aa31.26■■■□□ 2.59
SMIM4-203ENST00000477703 RUSC2Q8N2Y8 1516 aa31.16■■■□□ 2.58
SMIM4-203ENST00000477703 EEA1Q15075 1411 aa31.15■■■□□ 2.58
SMIM4-203ENST00000477703 TOP2BQ02880 1626 aa31.14■■■□□ 2.58
SMIM4-203ENST00000477703 PRDM2Q13029 1718 aa31.14■■■□□ 2.58
SMIM4-203ENST00000477703 EHMT2Q96KQ7 1210 aa31.13■■■□□ 2.57
SMIM4-203ENST00000477703 CADPSQ9ULU8 1353 aa31.11■■■□□ 2.57
SMIM4-203ENST00000477703 BIVM-ERCC5R4GMW8 1640 aa31.1■■■□□ 2.57
SMIM4-203ENST00000477703 CSRNP3Q8WYN3 585 aa31.04■■■□□ 2.56
SMIM4-203ENST00000477703 CUX1P39880 1505 aa31■■■□□ 2.55
SMIM4-203ENST00000477703 DNAJC5BQ9UF47 199 aa30.8■■■□□ 2.52
SMIM4-203ENST00000477703 TNIKQ9UKE5 1360 aa30.79■■■□□ 2.52
SMIM4-203ENST00000477703 NESP48681 1621 aa30.77■■■□□ 2.52
SMIM4-203ENST00000477703 KIF21BO75037 1637 aa30.76■■■□□ 2.51
SMIM4-203ENST00000477703 GOLGA3Q08378 1498 aa30.76■■■□□ 2.51
SMIM4-203ENST00000477703 FANCD2Q9BXW9 1451 aa30.75■■■□□ 2.51
SMIM4-203ENST00000477703 CEP164Q9UPV0 1460 aa30.72■■■□□ 2.51
SMIM4-203ENST00000477703 PCGF6Q9BYE7 350 aa30.7■■■□□ 2.51
SMIM4-203ENST00000477703 LAMC3Q9Y6N6 1575 aa30.7■■■□□ 2.5
SMIM4-203ENST00000477703 UBTFP17480 764 aaKnown RBP30.65■■■□□ 2.5
SMIM4-203ENST00000477703 CEP162Q5TB80 1403 aa30.64■■■□□ 2.5
SMIM4-203ENST00000477703 KIF27Q86VH2 1401 aa30.58■■■□□ 2.49
SMIM4-203ENST00000477703 RAPGEF2Q9Y4G8 1499 aa30.57■■■□□ 2.48
SMIM4-203ENST00000477703 FGD5Q6ZNL6 1462 aa30.56■■■□□ 2.48
SMIM4-203ENST00000477703 TRIM26Q12899 539 aaPredicted RBP30.55■■■□□ 2.48
SMIM4-203ENST00000477703 PRXQ9BXM0 1461 aa30.54■■■□□ 2.48
SMIM4-203ENST00000477703 DNMBPQ6XZF7 1577 aa30.53■■■□□ 2.48
SMIM4-203ENST00000477703 TOPBP1Q92547 1522 aa30.48■■■□□ 2.47
SMIM4-203ENST00000477703 ERICH3Q5RHP9 1530 aa30.47■■■□□ 2.47
SMIM4-203ENST00000477703 PDS5BQ9NTI5 1447 aa30.44■■■□□ 2.46
SMIM4-203ENST00000477703 CUX2O14529 1486 aa30.44■■■□□ 2.46
SMIM4-203ENST00000477703 URB2Q14146 1524 aaKnown RBP30.39■■■□□ 2.46
SMIM4-203ENST00000477703 POLA1P09884 1462 aaPredicted RBP30.37■■■□□ 2.45
SMIM4-203ENST00000477703 IGF1RP08069 1367 aa30.36■■■□□ 2.45
SMIM4-203ENST00000477703 KIF21AQ7Z4S6 1674 aa30.36■■■□□ 2.45
SMIM4-203ENST00000477703 RAD54L2Q9Y4B4 1467 aa30.32■■■□□ 2.44
SMIM4-203ENST00000477703 CLIP1P30622 1438 aa30.3■■■□□ 2.44
SMIM4-203ENST00000477703 ABCA10Q8WWZ4 1543 aa30.3■■■□□ 2.44
SMIM4-203ENST00000477703 PPARGC1BQ86YN6 1023 aaKnown RBP30.25■■■□□ 2.43
SMIM4-203ENST00000477703 CARMIL1Q5VZK9 1371 aa30.17■■■□□ 2.42
SMIM4-203ENST00000477703 WDR97A6NE52 1622 aa30.17■■■□□ 2.42
SMIM4-203ENST00000477703 HRCP23327 699 aa30.13■■■□□ 2.41
SMIM4-203ENST00000477703 VPS8Q8N3P4 1428 aa30.1■■■□□ 2.41
SMIM4-203ENST00000477703 RANGAP1P46060 587 aaPredicted RBP30.08■■■□□ 2.41
SMIM4-203ENST00000477703 MRC2Q9UBG0 1479 aa30.03■■■□□ 2.4
SMIM4-203ENST00000477703 ABCA5Q8WWZ7 1642 aa30.02■■■□□ 2.4
SMIM4-203ENST00000477703 TARBP1Q13395 1621 aaKnown RBP30.01■■■□□ 2.39
SMIM4-203ENST00000477703 ARAP1Q96P48 1450 aa30■■■□□ 2.39
SMIM4-203ENST00000477703 TDRD9Q8NDG6 1382 aaKnown RBP29.98■■■□□ 2.39
SMIM4-203ENST00000477703 CUL7Q14999 1698 aa29.98■■■□□ 2.39
SMIM4-203ENST00000477703 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
SMIM4-203ENST00000477703 ARHGAP35Q9NRY4 1499 aa29.93■■■□□ 2.38
SMIM4-203ENST00000477703 WDR62O43379 1518 aa29.88■■■□□ 2.37
SMIM4-203ENST00000477703 TTBK1Q5TCY1 1321 aaPredicted RBP29.87■■■□□ 2.37
SMIM4-203ENST00000477703 ERCC6Q03468 1493 aa29.75■■■□□ 2.35
SMIM4-203ENST00000477703 APLP2Q06481 763 aa29.75■■■□□ 2.35
SMIM4-203ENST00000477703 CTTNBP2Q8WZ74 1663 aa29.74■■■□□ 2.35
SMIM4-203ENST00000477703 IFT140Q96RY7 1462 aa29.74■■■□□ 2.35
SMIM4-203ENST00000477703 PBRM1Q86U86 1689 aa29.73■■■□□ 2.35
SMIM4-203ENST00000477703 AQRO60306 1485 aaKnown RBP eCLIP29.73■■■□□ 2.35
SMIM4-203ENST00000477703 THOC2Q8NI27 1593 aaKnown RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms