RNA–Protein interactions for RNA: ENST00000349157.10

PUF60-202, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PUF60, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-202ENST00000349157 NISCHQ9Y2I1 1504 aa43.08■■■■■ 4.49
PUF60-202ENST00000349157 CCDC180Q9P1Z9 1646 aa37.45■■■■□ 3.59
PUF60-202ENST00000349157 ZCCHC6Q5VYS8 1495 aaKnown RBP36.29■■■■□ 3.4
PUF60-202ENST00000349157 DCAF1Q9Y4B6 1507 aa35.79■■■■□ 3.32
PUF60-202ENST00000349157 MYO15BQ96JP2 1530 aa35.24■■■■□ 3.23
PUF60-202ENST00000349157 DCAF8L2P0C7V8 631 aa35.21■■■■□ 3.23
PUF60-202ENST00000349157 SHROOM4Q9ULL8 1493 aa35.17■■■■□ 3.22
PUF60-202ENST00000349157 NACADO15069 1562 aa34.78■■■■□ 3.16
PUF60-202ENST00000349157 ABCC9O60706 1549 aa34.72■■■■□ 3.15
PUF60-202ENST00000349157 RB1CC1Q8TDY2 1594 aa34.33■■■■□ 3.09
PUF60-202ENST00000349157 SCRIBQ14160 1630 aa34.27■■■■□ 3.08
PUF60-202ENST00000349157 SUPT5HO00267 1087 aaKnown RBP34.16■■■■□ 3.06
PUF60-202ENST00000349157 RSF1Q96T23 1441 aaPredicted RBP33.55■■■□□ 2.96
PUF60-202ENST00000349157 UNC13AQ9UPW8 1703 aa33.46■■■□□ 2.95
PUF60-202ENST00000349157 BAZ1AQ9NRL2 1556 aaPredicted RBP33.29■■■□□ 2.92
PUF60-202ENST00000349157 CECR2Q9BXF3 1484 aa33.27■■■□□ 2.92
PUF60-202ENST00000349157 MROH2BQ7Z745 1585 aa33.19■■■□□ 2.9
PUF60-202ENST00000349157 BICRAQ9NZM4 1560 aa33.14■■■□□ 2.9
PUF60-202ENST00000349157 CHIC1Q5VXU3 224 aa33.05■■■□□ 2.88
PUF60-202ENST00000349157 SMARCA4P51532 1647 aa32.99■■■□□ 2.87
PUF60-202ENST00000349157 WIZO95785 1651 aa32.92■■■□□ 2.86
PUF60-202ENST00000349157 PABPN1Q86U42 306 aaKnown RBP eCLIP32.79■■■□□ 2.843e-7■■■□□ 16.4
PUF60-202ENST00000349157 TOP2AP11388 1531 aaKnown RBP32.74■■■□□ 2.83
PUF60-202ENST00000349157 PEG3Q9GZU2 1588 aa32.68■■■□□ 2.82
PUF60-202ENST00000349157 SMARCA2P51531 1590 aa32.44■■■□□ 2.78
PUF60-202ENST00000349157 ATAD2BQ9ULI0 1458 aa32.34■■■□□ 2.77
PUF60-202ENST00000349157 CCDC88BA6NC98 1476 aa32.33■■■□□ 2.77
PUF60-202ENST00000349157 EIF4G1Q04637 1599 aaKnown RBP32.29■■■□□ 2.76
PUF60-202ENST00000349157 TRIM41Q8WV44 630 aa32.23■■■□□ 2.75
PUF60-202ENST00000349157 BAZ1BQ9UIG0 1483 aaKnown RBP32.2■■■□□ 2.75
PUF60-202ENST00000349157 HMGXB3Q12766 1538 aa32.08■■■□□ 2.73
PUF60-202ENST00000349157 NCAPD3P42695 1498 aa32.06■■■□□ 2.72
PUF60-202ENST00000349157 ABCC8Q09428 1581 aa31.69■■■□□ 2.66
PUF60-202ENST00000349157 LOC105371045A0A1W2PR82 267 aa31.64■■■□□ 2.66
PUF60-202ENST00000349157 WRNQ14191 1432 aaPredicted RBP eCLIP31.61■■■□□ 2.65
PUF60-202ENST00000349157 EEA1Q15075 1411 aa31.59■■■□□ 2.65
PUF60-202ENST00000349157 CC2D2AQ9P2K1 1620 aa31.51■■■□□ 2.64
PUF60-202ENST00000349157 CFTRP13569 1480 aa31.45■■■□□ 2.63
PUF60-202ENST00000349157 FAM9AQ8IZU1 332 aaPredicted RBP31.45■■■□□ 2.62
PUF60-202ENST00000349157 SYNJ1O43426 1573 aa31.35■■■□□ 2.61
PUF60-202ENST00000349157 PRDM2Q13029 1718 aa31.33■■■□□ 2.61
PUF60-202ENST00000349157 TOP2BQ02880 1626 aa31.32■■■□□ 2.6
PUF60-202ENST00000349157 BIVM-ERCC5R4GMW8 1640 aa31.28■■■□□ 2.6
PUF60-202ENST00000349157 CADPSQ9ULU8 1353 aa31.24■■■□□ 2.59
PUF60-202ENST00000349157 SOGA1O94964 1423 aa31.23■■■□□ 2.59
PUF60-202ENST00000349157 CSRNP3Q8WYN3 585 aa31.19■■■□□ 2.58
PUF60-202ENST00000349157 TNIKQ9UKE5 1360 aa31.04■■■□□ 2.56
PUF60-202ENST00000349157 GOLGA3Q08378 1498 aa31.04■■■□□ 2.56
PUF60-202ENST00000349157 CUX1P39880 1505 aa31.02■■■□□ 2.56
PUF60-202ENST00000349157 KIF21BO75037 1637 aa31.02■■■□□ 2.56
PUF60-202ENST00000349157 CEP164Q9UPV0 1460 aa31.02■■■□□ 2.56
PUF60-202ENST00000349157 RUSC2Q8N2Y8 1516 aa31.01■■■□□ 2.55
PUF60-202ENST00000349157 LAMC3Q9Y6N6 1575 aa30.91■■■□□ 2.54
PUF60-202ENST00000349157 FANCD2Q9BXW9 1451 aa30.85■■■□□ 2.53
PUF60-202ENST00000349157 TRIM26Q12899 539 aaPredicted RBP30.84■■■□□ 2.53
PUF60-202ENST00000349157 KIF27Q86VH2 1401 aa30.83■■■□□ 2.53
PUF60-202ENST00000349157 EHMT2Q96KQ7 1210 aa30.82■■■□□ 2.52
PUF60-202ENST00000349157 CEP162Q5TB80 1403 aa30.81■■■□□ 2.52
PUF60-202ENST00000349157 ERICH3Q5RHP9 1530 aa30.78■■■□□ 2.52
PUF60-202ENST00000349157 UBTFP17480 764 aaKnown RBP30.77■■■□□ 2.52
PUF60-202ENST00000349157 PCGF6Q9BYE7 350 aa30.76■■■□□ 2.51
PUF60-202ENST00000349157 DNMBPQ6XZF7 1577 aa30.71■■■□□ 2.51
PUF60-202ENST00000349157 PRXQ9BXM0 1461 aa30.7■■■□□ 2.5
PUF60-202ENST00000349157 PDS5BQ9NTI5 1447 aa30.67■■■□□ 2.5
PUF60-202ENST00000349157 FGD5Q6ZNL6 1462 aa30.64■■■□□ 2.49
PUF60-202ENST00000349157 RAPGEF2Q9Y4G8 1499 aa30.61■■■□□ 2.49
PUF60-202ENST00000349157 NESP48681 1621 aa30.6■■■□□ 2.49
PUF60-202ENST00000349157 DNAJC5BQ9UF47 199 aa30.59■■■□□ 2.49
PUF60-202ENST00000349157 TOPBP1Q92547 1522 aa30.56■■■□□ 2.48
PUF60-202ENST00000349157 CUX2O14529 1486 aa30.53■■■□□ 2.48
PUF60-202ENST00000349157 CLIP1P30622 1438 aa30.5■■■□□ 2.47
PUF60-202ENST00000349157 ABCA10Q8WWZ4 1543 aa30.47■■■□□ 2.47
PUF60-202ENST00000349157 POLA1P09884 1462 aaPredicted RBP30.43■■■□□ 2.46
PUF60-202ENST00000349157 IGF1RP08069 1367 aa30.42■■■□□ 2.46
PUF60-202ENST00000349157 HRCP23327 699 aa30.38■■■□□ 2.45
PUF60-202ENST00000349157 URB2Q14146 1524 aaKnown RBP30.37■■■□□ 2.45
PUF60-202ENST00000349157 VPS8Q8N3P4 1428 aa30.34■■■□□ 2.45
PUF60-202ENST00000349157 CARMIL1Q5VZK9 1371 aa30.31■■■□□ 2.44
PUF60-202ENST00000349157 KIF21AQ7Z4S6 1674 aa30.3■■■□□ 2.44
PUF60-202ENST00000349157 WDR97A6NE52 1622 aa30.26■■■□□ 2.44
PUF60-202ENST00000349157 CUL7Q14999 1698 aa30.25■■■□□ 2.43
PUF60-202ENST00000349157 RAD54L2Q9Y4B4 1467 aa30.24■■■□□ 2.43
PUF60-202ENST00000349157 MRC2Q9UBG0 1479 aa30.18■■■□□ 2.42
PUF60-202ENST00000349157 ABCA5Q8WWZ7 1642 aa30.13■■■□□ 2.41
PUF60-202ENST00000349157 APLP2Q06481 763 aa30.11■■■□□ 2.41
PUF60-202ENST00000349157 ARAP1Q96P48 1450 aa30.08■■■□□ 2.41
PUF60-202ENST00000349157 GAPVD1Q14C86 1478 aa30.06■■■□□ 2.4
PUF60-202ENST00000349157 TARBP1Q13395 1621 aaKnown RBP30.05■■■□□ 2.4
PUF60-202ENST00000349157 ZEB1P37275 1124 aaPredicted RBP30.04■■■□□ 2.4
PUF60-202ENST00000349157 ARHGAP35Q9NRY4 1499 aa30.01■■■□□ 2.39
PUF60-202ENST00000349157 WDR62O43379 1518 aa30.01■■■□□ 2.39
PUF60-202ENST00000349157 PPARGC1BQ86YN6 1023 aaKnown RBP30■■■□□ 2.39
PUF60-202ENST00000349157 IFT140Q96RY7 1462 aa29.94■■■□□ 2.38
PUF60-202ENST00000349157 EFCAB5A4FU69 1503 aa29.92■■■□□ 2.38
PUF60-202ENST00000349157 TDRD9Q8NDG6 1382 aaKnown RBP29.92■■■□□ 2.38
PUF60-202ENST00000349157 CTTNBP2Q8WZ74 1663 aa29.9■■■□□ 2.38
PUF60-202ENST00000349157 RANGAP1P46060 587 aaPredicted RBP29.89■■■□□ 2.38
PUF60-202ENST00000349157 FHAD1B1AJZ9 1412 aa29.86■■■□□ 2.37
PUF60-202ENST00000349157 MAP3K1Q13233 1512 aa29.86■■■□□ 2.37
PUF60-202ENST00000349157 ERCC6Q03468 1493 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms