RNA–Protein interactions for RNA: ENST00000217260.8

RSPO4-201, Transcript of R-spondin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPO4, Length 2,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-201ENST00000217260 NISCHQ9Y2I1 1504 aa38.05■■■■□ 3.68
RSPO4-201ENST00000217260 SHROOM4Q9ULL8 1493 aa32.39■■■□□ 2.78
RSPO4-201ENST00000217260 CCDC180Q9P1Z9 1646 aa32.37■■■□□ 2.77
RSPO4-201ENST00000217260 ZCCHC6Q5VYS8 1495 aaKnown RBP32.19■■■□□ 2.74
RSPO4-201ENST00000217260 SUPT5HO00267 1087 aaKnown RBP31.79■■■□□ 2.68
RSPO4-201ENST00000217260 DCAF8L2P0C7V8 631 aa31.52■■■□□ 2.64
RSPO4-201ENST00000217260 DCAF1Q9Y4B6 1507 aa31.25■■■□□ 2.59
RSPO4-201ENST00000217260 CHIC1Q5VXU3 224 aa30.93■■■□□ 2.54
RSPO4-201ENST00000217260 MYO15BQ96JP2 1530 aa30.77■■■□□ 2.52
RSPO4-201ENST00000217260 ABCC9O60706 1549 aa30.37■■■□□ 2.45
RSPO4-201ENST00000217260 SCRIBQ14160 1630 aa30.3■■■□□ 2.44
RSPO4-201ENST00000217260 HRCP23327 699 aa30.21■■■□□ 2.43
RSPO4-201ENST00000217260 RSF1Q96T23 1441 aaPredicted RBP30.1■■■□□ 2.41
RSPO4-201ENST00000217260 LOC105371045A0A1W2PR82 267 aa29.99■■■□□ 2.39
RSPO4-201ENST00000217260 PCGF6Q9BYE7 350 aa29.96■■■□□ 2.39
RSPO4-201ENST00000217260 NACADO15069 1562 aa29.93■■■□□ 2.38
RSPO4-201ENST00000217260 RB1CC1Q8TDY2 1594 aa29.79■■■□□ 2.36
RSPO4-201ENST00000217260 CECR2Q9BXF3 1484 aa29.65■■■□□ 2.34
RSPO4-201ENST00000217260 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
RSPO4-201ENST00000217260 MROH2BQ7Z745 1585 aa29.57■■■□□ 2.32
RSPO4-201ENST00000217260 PPARGC1BQ86YN6 1023 aaKnown RBP29.48■■■□□ 2.31
RSPO4-201ENST00000217260 TRIM26Q12899 539 aaPredicted RBP29.43■■■□□ 2.3
RSPO4-201ENST00000217260 WIZO95785 1651 aa29.41■■■□□ 2.3
RSPO4-201ENST00000217260 FAM9AQ8IZU1 332 aaPredicted RBP29.36■■■□□ 2.29
RSPO4-201ENST00000217260 BAZ1AQ9NRL2 1556 aaPredicted RBP29.24■■■□□ 2.27
RSPO4-201ENST00000217260 EHMT2Q96KQ7 1210 aa29.08■■■□□ 2.25
RSPO4-201ENST00000217260 EIF4G1Q04637 1599 aaKnown RBP29.01■■■□□ 2.24
RSPO4-201ENST00000217260 UNC13AQ9UPW8 1703 aa28.99■■■□□ 2.23
RSPO4-201ENST00000217260 PELP1Q8IZL8 1130 aaKnown RBP28.98■■■□□ 2.23
RSPO4-201ENST00000217260 SMARCA4P51532 1647 aa28.98■■■□□ 2.23
RSPO4-201ENST00000217260 TOP2AP11388 1531 aaKnown RBP28.96■■■□□ 2.23
RSPO4-201ENST00000217260 CCDC88BA6NC98 1476 aa28.84■■■□□ 2.21
RSPO4-201ENST00000217260 ZEB1P37275 1124 aaPredicted RBP28.8■■■□□ 2.2
RSPO4-201ENST00000217260 SMARCA2P51531 1590 aa28.8■■■□□ 2.2
RSPO4-201ENST00000217260 ABCC8Q09428 1581 aa28.74■■■□□ 2.19
RSPO4-201ENST00000217260 PABPN1Q86U42 306 aaKnown RBP eCLIP28.63■■■□□ 2.17
RSPO4-201ENST00000217260 BICRAQ9NZM4 1560 aa28.62■■■□□ 2.17
RSPO4-201ENST00000217260 SOGA1O94964 1423 aa28.48■■■□□ 2.15
RSPO4-201ENST00000217260 PEG3Q9GZU2 1588 aa28.43■■■□□ 2.14
RSPO4-201ENST00000217260 SCAF1Q9H7N4 1312 aaKnown RBP28.41■■■□□ 2.14
RSPO4-201ENST00000217260 EEA1Q15075 1411 aa28.38■■■□□ 2.13
RSPO4-201ENST00000217260 CEP162Q5TB80 1403 aa28.37■■■□□ 2.13
RSPO4-201ENST00000217260 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
RSPO4-201ENST00000217260 CSRNP3Q8WYN3 585 aa28.35■■■□□ 2.13
RSPO4-201ENST00000217260 TNIKQ9UKE5 1360 aa28.34■■■□□ 2.13
RSPO4-201ENST00000217260 RUSC2Q8N2Y8 1516 aa28.33■■■□□ 2.13
RSPO4-201ENST00000217260 UBTFP17480 764 aaKnown RBP28.24■■■□□ 2.11
RSPO4-201ENST00000217260 ATAD2BQ9ULI0 1458 aa28.23■■■□□ 2.11
RSPO4-201ENST00000217260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.22■■■□□ 2.11
RSPO4-201ENST00000217260 GOLGA3Q08378 1498 aa28.17■■■□□ 2.1
RSPO4-201ENST00000217260 CCER1Q8TC90 406 aaPredicted RBP28.17■■■□□ 2.1
RSPO4-201ENST00000217260 BAZ1BQ9UIG0 1483 aaKnown RBP28.16■■■□□ 2.1
RSPO4-201ENST00000217260 TTBK1Q5TCY1 1321 aaPredicted RBP28.15■■■□□ 2.1
RSPO4-201ENST00000217260 SYNJ1O43426 1573 aa28.13■■■□□ 2.09
RSPO4-201ENST00000217260 CEP164Q9UPV0 1460 aa28.02■■■□□ 2.08
RSPO4-201ENST00000217260 KIF21BO75037 1637 aa27.99■■■□□ 2.07
RSPO4-201ENST00000217260 ACIN1Q9UKV3 1341 aaKnown RBP27.86■■■□□ 2.05
RSPO4-201ENST00000217260 CLIP1P30622 1438 aa27.85■■■□□ 2.05
RSPO4-201ENST00000217260 MYT1Q01538 1121 aa27.84■■■□□ 2.05
RSPO4-201ENST00000217260 TOP2BQ02880 1626 aa27.81■■■□□ 2.04
RSPO4-201ENST00000217260 RAPGEF2Q9Y4G8 1499 aa27.79■■■□□ 2.04
RSPO4-201ENST00000217260 NEUROD1Q13562 356 aa27.73■■■□□ 2.03
RSPO4-201ENST00000217260 VPS8Q8N3P4 1428 aa27.73■■■□□ 2.03
RSPO4-201ENST00000217260 BIVM-ERCC5R4GMW8 1640 aa27.71■■■□□ 2.03
RSPO4-201ENST00000217260 NCAPD3P42695 1498 aa27.69■■■□□ 2.02
RSPO4-201ENST00000217260 HMGXB3Q12766 1538 aa27.69■■■□□ 2.02
RSPO4-201ENST00000217260 RANGAP1P46060 587 aaPredicted RBP27.63■■■□□ 2.01
RSPO4-201ENST00000217260 APLP2Q06481 763 aa27.63■■■□□ 2.01
RSPO4-201ENST00000217260 CENPBP07199 599 aaPredicted RBP27.61■■■□□ 2.01
RSPO4-201ENST00000217260 DIEXFQ68CQ4 756 aaKnown RBP27.61■■■□□ 2.01
RSPO4-201ENST00000217260 GTF3C3Q9Y5Q9 886 aa27.59■■■□□ 2.01
RSPO4-201ENST00000217260 HNRNPUL2Q1KMD3 747 aaKnown RBP27.59■■■□□ 2.01
RSPO4-201ENST00000217260 ERICH3Q5RHP9 1530 aa27.54■■■□□ 2
RSPO4-201ENST00000217260 PRXQ9BXM0 1461 aa27.54■■■□□ 2
RSPO4-201ENST00000217260 CUX1P39880 1505 aa27.53■■■□□ 2
RSPO4-201ENST00000217260 CFTRP13569 1480 aa27.47■■□□□ 1.99
RSPO4-201ENST00000217260 KIF27Q86VH2 1401 aa27.43■■□□□ 1.98
RSPO4-201ENST00000217260 ZNF316A6NFI3 1004 aaPredicted RBP27.42■■□□□ 1.98
RSPO4-201ENST00000217260 ARAP1Q96P48 1450 aa27.39■■□□□ 1.97
RSPO4-201ENST00000217260 PRDM2Q13029 1718 aa27.26■■□□□ 1.95
RSPO4-201ENST00000217260 KANK4Q5T7N3 995 aaPredicted RBP27.24■■□□□ 1.95
RSPO4-201ENST00000217260 CADPSQ9ULU8 1353 aa27.16■■□□□ 1.94
RSPO4-201ENST00000217260 ARHGAP35Q9NRY4 1499 aa27.16■■□□□ 1.94
RSPO4-201ENST00000217260 CUX2O14529 1486 aa27.15■■□□□ 1.94
RSPO4-201ENST00000217260 IGF1RP08069 1367 aa27.12■■□□□ 1.93
RSPO4-201ENST00000217260 RRBP1Q9P2E9 1410 aaKnown RBP27.09■■□□□ 1.93
RSPO4-201ENST00000217260 CLSPNQ9HAW4 1339 aa27.08■■□□□ 1.93
RSPO4-201ENST00000217260 DHX57Q6P158 1386 aaKnown RBP27.06■■□□□ 1.92
RSPO4-201ENST00000217260 FGD5Q6ZNL6 1462 aa27.04■■□□□ 1.92
RSPO4-201ENST00000217260 CARMIL1Q5VZK9 1371 aa27.01■■□□□ 1.91
RSPO4-201ENST00000217260 MIER1Q8N108 512 aa27■■□□□ 1.91
RSPO4-201ENST00000217260 CCNB3Q8WWL7 1395 aa26.98■■□□□ 1.91
RSPO4-201ENST00000217260 CC2D2AQ9P2K1 1620 aa26.97■■□□□ 1.91
RSPO4-201ENST00000217260 YTHDC1Q96MU7 727 aaKnown RBP26.96■■□□□ 1.91
RSPO4-201ENST00000217260 FANCD2Q9BXW9 1451 aa26.9■■□□□ 1.9
RSPO4-201ENST00000217260 TIAM1Q13009 1591 aa26.87■■□□□ 1.89
RSPO4-201ENST00000217260 MAP3K1Q13233 1512 aa26.87■■□□□ 1.89
RSPO4-201ENST00000217260 ITGAEP38570 1179 aa26.86■■□□□ 1.89
RSPO4-201ENST00000217260 DNMBPQ6XZF7 1577 aa26.78■■□□□ 1.88
RSPO4-201ENST00000217260 LRRC9Q6ZRR7 1453 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms