RNA–Protein interactions for RNA: ENST00000519934.5

MTDH-203, Transcript of metadherin, humanhuman

TSL 5 BASIC

Gene MTDH, Length 2,184 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTDH-203ENST00000519934 NISCHQ9Y2I1 1504 aa40.57■■■■■ 4.09
MTDH-203ENST00000519934 CCDC180Q9P1Z9 1646 aa35.5■■■■□ 3.27
MTDH-203ENST00000519934 ZCCHC6Q5VYS8 1495 aaKnown RBP34.06■■■■□ 3.04
MTDH-203ENST00000519934 SHROOM4Q9ULL8 1493 aa33.75■■■□□ 2.99
MTDH-203ENST00000519934 ABCC9O60706 1549 aa33.69■■■□□ 2.98
MTDH-203ENST00000519934 DCAF1Q9Y4B6 1507 aa33.6■■■□□ 2.97
MTDH-203ENST00000519934 DCAF8L2P0C7V8 631 aa33.48■■■□□ 2.95
MTDH-203ENST00000519934 MYO15BQ96JP2 1530 aa33.3■■■□□ 2.92
MTDH-203ENST00000519934 NACADO15069 1562 aa33.12■■■□□ 2.89
MTDH-203ENST00000519934 SUPT5HO00267 1087 aaKnown RBP32.95■■■□□ 2.87
MTDH-203ENST00000519934 RB1CC1Q8TDY2 1594 aa32.87■■■□□ 2.85
MTDH-203ENST00000519934 SCRIBQ14160 1630 aa32.56■■■□□ 2.8
MTDH-203ENST00000519934 UNC13AQ9UPW8 1703 aa32.13■■■□□ 2.73
MTDH-203ENST00000519934 CHIC1Q5VXU3 224 aa31.91■■■□□ 2.7
MTDH-203ENST00000519934 BICRAQ9NZM4 1560 aa31.86■■■□□ 2.69
MTDH-203ENST00000519934 PABPN1Q86U42 306 aaKnown RBP eCLIP31.71■■■□□ 2.67
MTDH-203ENST00000519934 CECR2Q9BXF3 1484 aa31.5■■■□□ 2.63
MTDH-203ENST00000519934 RSF1Q96T23 1441 aaPredicted RBP31.39■■■□□ 2.61
MTDH-203ENST00000519934 BAZ1AQ9NRL2 1556 aaPredicted RBP31.36■■■□□ 2.61
MTDH-203ENST00000519934 MROH2BQ7Z745 1585 aa31.31■■■□□ 2.6
MTDH-203ENST00000519934 SMARCA4P51532 1647 aa31.23■■■□□ 2.59
MTDH-203ENST00000519934 WIZO95785 1651 aa31.02■■■□□ 2.56
MTDH-203ENST00000519934 LOC105371045A0A1W2PR82 267 aa30.99■■■□□ 2.55
MTDH-203ENST00000519934 EIF4G1Q04637 1599 aaKnown RBP30.93■■■□□ 2.54
MTDH-203ENST00000519934 PEG3Q9GZU2 1588 aa30.89■■■□□ 2.54
MTDH-203ENST00000519934 SMARCA2P51531 1590 aa30.77■■■□□ 2.52
MTDH-203ENST00000519934 ATAD2BQ9ULI0 1458 aa30.77■■■□□ 2.52
MTDH-203ENST00000519934 TOP2AP11388 1531 aaKnown RBP30.75■■■□□ 2.51
MTDH-203ENST00000519934 TRIM41Q8WV44 630 aa30.68■■■□□ 2.5
MTDH-203ENST00000519934 PCGF6Q9BYE7 350 aa30.64■■■□□ 2.5
MTDH-203ENST00000519934 BAZ1BQ9UIG0 1483 aaKnown RBP30.59■■■□□ 2.49
MTDH-203ENST00000519934 NCAPD3P42695 1498 aa30.57■■■□□ 2.48
MTDH-203ENST00000519934 HMGXB3Q12766 1538 aa30.51■■■□□ 2.48
MTDH-203ENST00000519934 CC2D2AQ9P2K1 1620 aa30.5■■■□□ 2.47
MTDH-203ENST00000519934 FAM9AQ8IZU1 332 aaPredicted RBP30.47■■■□□ 2.47
MTDH-203ENST00000519934 HRCP23327 699 aa30.44■■■□□ 2.46
MTDH-203ENST00000519934 CCDC88BA6NC98 1476 aa30.4■■■□□ 2.46
MTDH-203ENST00000519934 EHMT2Q96KQ7 1210 aa30.24■■■□□ 2.43
MTDH-203ENST00000519934 TRIM26Q12899 539 aaPredicted RBP30.1■■■□□ 2.41
MTDH-203ENST00000519934 ABCC8Q09428 1581 aa30■■■□□ 2.39
MTDH-203ENST00000519934 PPARGC1BQ86YN6 1023 aaKnown RBP29.93■■■□□ 2.38
MTDH-203ENST00000519934 DNAJC5BQ9UF47 199 aa29.87■■■□□ 2.37
MTDH-203ENST00000519934 CFTRP13569 1480 aa29.83■■■□□ 2.37
MTDH-203ENST00000519934 CADPSQ9ULU8 1353 aa29.76■■■□□ 2.35
MTDH-203ENST00000519934 SOGA1O94964 1423 aa29.64■■■□□ 2.34
MTDH-203ENST00000519934 PRDM2Q13029 1718 aa29.62■■■□□ 2.33
MTDH-203ENST00000519934 LAMC3Q9Y6N6 1575 aa29.56■■■□□ 2.32
MTDH-203ENST00000519934 WRNQ14191 1432 aaPredicted RBP eCLIP29.56■■■□□ 2.32
MTDH-203ENST00000519934 RUSC2Q8N2Y8 1516 aa29.54■■■□□ 2.32
MTDH-203ENST00000519934 NESP48681 1621 aa29.51■■■□□ 2.31
MTDH-203ENST00000519934 FANCD2Q9BXW9 1451 aa29.42■■■□□ 2.3
MTDH-203ENST00000519934 SYNJ1O43426 1573 aa29.41■■■□□ 2.3
MTDH-203ENST00000519934 CSRNP3Q8WYN3 585 aa29.41■■■□□ 2.3
MTDH-203ENST00000519934 EEA1Q15075 1411 aa29.36■■■□□ 2.29
MTDH-203ENST00000519934 CEP162Q5TB80 1403 aa29.35■■■□□ 2.29
MTDH-203ENST00000519934 PDS5BQ9NTI5 1447 aa29.34■■■□□ 2.29
MTDH-203ENST00000519934 TOP2BQ02880 1626 aa29.34■■■□□ 2.29
MTDH-203ENST00000519934 TNIKQ9UKE5 1360 aa29.31■■■□□ 2.28
MTDH-203ENST00000519934 BIVM-ERCC5R4GMW8 1640 aa29.31■■■□□ 2.28
MTDH-203ENST00000519934 CUX1P39880 1505 aa29.3■■■□□ 2.28
MTDH-203ENST00000519934 UBTFP17480 764 aaKnown RBP29.27■■■□□ 2.28
MTDH-203ENST00000519934 CEP164Q9UPV0 1460 aa29.26■■■□□ 2.28
MTDH-203ENST00000519934 ZEB1P37275 1124 aaPredicted RBP29.24■■■□□ 2.27
MTDH-203ENST00000519934 GOLGA3Q08378 1498 aa29.19■■■□□ 2.26
MTDH-203ENST00000519934 TTBK1Q5TCY1 1321 aaPredicted RBP29.18■■■□□ 2.26
MTDH-203ENST00000519934 KIF21AQ7Z4S6 1674 aa29.15■■■□□ 2.26
MTDH-203ENST00000519934 DNMBPQ6XZF7 1577 aa29.12■■■□□ 2.25
MTDH-203ENST00000519934 TOPBP1Q92547 1522 aa29.07■■■□□ 2.24
MTDH-203ENST00000519934 URB2Q14146 1524 aaKnown RBP29.05■■■□□ 2.24
MTDH-203ENST00000519934 KIF21BO75037 1637 aa29.04■■■□□ 2.24
MTDH-203ENST00000519934 FGD5Q6ZNL6 1462 aa29.02■■■□□ 2.24
MTDH-203ENST00000519934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29■■■□□ 2.23
MTDH-203ENST00000519934 MRC2Q9UBG0 1479 aa28.97■■■□□ 2.23
MTDH-203ENST00000519934 ERCC6Q03468 1493 aa28.94■■■□□ 2.22
MTDH-203ENST00000519934 RAPGEF2Q9Y4G8 1499 aa28.93■■■□□ 2.22
MTDH-203ENST00000519934 POLA1P09884 1462 aaPredicted RBP28.92■■■□□ 2.22
MTDH-203ENST00000519934 CCER1Q8TC90 406 aaPredicted RBP28.85■■■□□ 2.21
MTDH-203ENST00000519934 CLIP1P30622 1438 aa28.85■■■□□ 2.21
MTDH-203ENST00000519934 KIF27Q86VH2 1401 aa28.84■■■□□ 2.21
MTDH-203ENST00000519934 WDR62O43379 1518 aa28.83■■■□□ 2.21
MTDH-203ENST00000519934 RANGAP1P46060 587 aaPredicted RBP28.8■■■□□ 2.2
MTDH-203ENST00000519934 CUX2O14529 1486 aa28.79■■■□□ 2.2
MTDH-203ENST00000519934 RAD54L2Q9Y4B4 1467 aa28.79■■■□□ 2.2
MTDH-203ENST00000519934 ABCA10Q8WWZ4 1543 aa28.78■■■□□ 2.2
MTDH-203ENST00000519934 THOC2Q8NI27 1593 aaKnown RBP28.77■■■□□ 2.2
MTDH-203ENST00000519934 VPS8Q8N3P4 1428 aa28.69■■■□□ 2.18
MTDH-203ENST00000519934 WDR97A6NE52 1622 aa28.68■■■□□ 2.18
MTDH-203ENST00000519934 TARBP1Q13395 1621 aaKnown RBP28.65■■■□□ 2.18
MTDH-203ENST00000519934 PRXQ9BXM0 1461 aa28.65■■■□□ 2.18
MTDH-203ENST00000519934 ERICH3Q5RHP9 1530 aa28.6■■■□□ 2.17
MTDH-203ENST00000519934 IFT140Q96RY7 1462 aa28.59■■■□□ 2.17
MTDH-203ENST00000519934 IGF1RP08069 1367 aa28.58■■■□□ 2.17
MTDH-203ENST00000519934 ABCA5Q8WWZ7 1642 aa28.55■■■□□ 2.16
MTDH-203ENST00000519934 TDRD9Q8NDG6 1382 aaKnown RBP28.53■■■□□ 2.16
MTDH-203ENST00000519934 GAPVD1Q14C86 1478 aa28.5■■■□□ 2.15
MTDH-203ENST00000519934 APLP2Q06481 763 aa28.5■■■□□ 2.15
MTDH-203ENST00000519934 HNRNPUL2Q1KMD3 747 aaKnown RBP28.48■■■□□ 2.15
MTDH-203ENST00000519934 ARAP1Q96P48 1450 aa28.46■■■□□ 2.15
MTDH-203ENST00000519934 CARMIL1Q5VZK9 1371 aa28.44■■■□□ 2.14
MTDH-203ENST00000519934 CUL7Q14999 1698 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms