RNA–Protein interactions for RNA: ENST00000245552.6

NT5C-201, Transcript of 5', 3'-nucleotidase, cytosolic, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NT5C, Length 954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C-201ENST00000245552 NISCHQ9Y2I1 1504 aa52.14■■■■■ 5.94
NT5C-201ENST00000245552 ABCC9O60706 1549 aa47.19■■■■■ 5.14
NT5C-201ENST00000245552 CCDC180Q9P1Z9 1646 aa46.94■■■■■ 5.1
NT5C-201ENST00000245552 RB1CC1Q8TDY2 1594 aa44.79■■■■■ 4.76
NT5C-201ENST00000245552 DNAJC5BQ9UF47 199 aa44.45■■■■■ 4.71
NT5C-201ENST00000245552 NACADO15069 1562 aa44.41■■■■■ 4.7
NT5C-201ENST00000245552 DCAF8L2P0C7V8 631 aa44.17■■■■■ 4.66
NT5C-201ENST00000245552 PABPN1Q86U42 306 aaKnown RBP eCLIP43.88■■■■■ 4.627e-9■■□□□ 13.6
NT5C-201ENST00000245552 UNC13AQ9UPW8 1703 aa43.84■■■■■ 4.61
NT5C-201ENST00000245552 MYO15BQ96JP2 1530 aa43.67■■■■■ 4.58
NT5C-201ENST00000245552 BICRAQ9NZM4 1560 aa43.49■■■■■ 4.55
NT5C-201ENST00000245552 ZCCHC6Q5VYS8 1495 aaKnown RBP43.15■■■■■ 4.5
NT5C-201ENST00000245552 DCAF1Q9Y4B6 1507 aa43.03■■■■■ 4.48
NT5C-201ENST00000245552 SHROOM4Q9ULL8 1493 aa42.84■■■■■ 4.45
NT5C-201ENST00000245552 SCRIBQ14160 1630 aa42.77■■■■■ 4.44
NT5C-201ENST00000245552 CC2D2AQ9P2K1 1620 aa42.61■■■■■ 4.41
NT5C-201ENST00000245552 CECR2Q9BXF3 1484 aa42.52■■■■■ 4.4
NT5C-201ENST00000245552 EIF4G1Q04637 1599 aaKnown RBP42.45■■■■■ 4.39
NT5C-201ENST00000245552 DNAJC5Q9H3Z4 198 aa41.01■■■■■ 4.16
NT5C-201ENST00000245552 NCAPD3P42695 1498 aa40.97■■■■■ 4.15
NT5C-201ENST00000245552 ATAD2BQ9ULI0 1458 aa40.83■■■■■ 4.13
NT5C-201ENST00000245552 ERCC6Q03468 1493 aa40.77■■■■■ 4.12
NT5C-201ENST00000245552 SMARCA4P51532 1647 aa40.75■■■■■ 4.11
NT5C-201ENST00000245552 CUX2O14529 1486 aa40.75■■■■■ 4.11
NT5C-201ENST00000245552 SMARCA2P51531 1590 aa40.71■■■■■ 4.11
NT5C-201ENST00000245552 HMGXB3Q12766 1538 aa40.67■■■■■ 4.1
NT5C-201ENST00000245552 BAZ1AQ9NRL2 1556 aaPredicted RBP40.5■■■■■ 4.07
NT5C-201ENST00000245552 NESP48681 1621 aa40.45■■■■■ 4.07
NT5C-201ENST00000245552 BAZ1BQ9UIG0 1483 aaKnown RBP40.45■■■■■ 4.07
NT5C-201ENST00000245552 PEG3Q9GZU2 1588 aa40.33■■■■■ 4.05
NT5C-201ENST00000245552 MROH2BQ7Z745 1585 aa40.18■■■■■ 4.02
NT5C-201ENST00000245552 LAMC3Q9Y6N6 1575 aa40.13■■■■■ 4.01
NT5C-201ENST00000245552 THOC2Q8NI27 1593 aaKnown RBP40.1■■■■■ 4.01
NT5C-201ENST00000245552 KIF21AQ7Z4S6 1674 aa39.97■■■■□ 3.99
NT5C-201ENST00000245552 PDS5BQ9NTI5 1447 aa39.89■■■■□ 3.98
NT5C-201ENST00000245552 WIZO95785 1651 aa39.73■■■■□ 3.95
NT5C-201ENST00000245552 CADPSQ9ULU8 1353 aa39.72■■■■□ 3.95
NT5C-201ENST00000245552 MRC2Q9UBG0 1479 aa39.57■■■■□ 3.93
NT5C-201ENST00000245552 WDR62O43379 1518 aa39.48■■■■□ 3.91
NT5C-201ENST00000245552 CEP164Q9UPV0 1460 aa39.37■■■■□ 3.89
NT5C-201ENST00000245552 FANCD2Q9BXW9 1451 aa39.3■■■■□ 3.88
NT5C-201ENST00000245552 RSF1Q96T23 1441 aaPredicted RBP39.23■■■■□ 3.87
NT5C-201ENST00000245552 CFTRP13569 1480 aa39.22■■■■□ 3.87
NT5C-201ENST00000245552 TOP2AP11388 1531 aaKnown RBP39.18■■■■□ 3.86
NT5C-201ENST00000245552 TRIM41Q8WV44 630 aa39.16■■■■□ 3.86
NT5C-201ENST00000245552 URB2Q14146 1524 aaKnown RBP38.99■■■■□ 3.83
NT5C-201ENST00000245552 PRDM2Q13029 1718 aa38.89■■■■□ 3.82
NT5C-201ENST00000245552 OSCARQ8IYS5 282 aa38.85■■■■□ 3.81
NT5C-201ENST00000245552 CCDC88BA6NC98 1476 aa38.73■■■■□ 3.79
NT5C-201ENST00000245552 IFT140Q96RY7 1462 aa38.58■■■■□ 3.77
NT5C-201ENST00000245552 ZNF608Q9ULD9 1512 aaPredicted RBP38.55■■■■□ 3.76
NT5C-201ENST00000245552 TOPBP1Q92547 1522 aa38.53■■■■□ 3.76
NT5C-201ENST00000245552 ABCC8Q09428 1581 aa38.42■■■■□ 3.74
NT5C-201ENST00000245552 RIMBP3CA6NJZ7 1639 aa38.41■■■■□ 3.74
NT5C-201ENST00000245552 RIMBP3BA6NNM3 1639 aa38.41■■■■□ 3.74
NT5C-201ENST00000245552 RIMBP3Q9UFD9 1639 aa38.41■■■■□ 3.74
NT5C-201ENST00000245552 DNMBPQ6XZF7 1577 aa38.37■■■■□ 3.73
NT5C-201ENST00000245552 EIF4G3O43432 1585 aaKnown RBP38.36■■■■□ 3.73
NT5C-201ENST00000245552 ARHGEF11O15085 1522 aa38.24■■■■□ 3.71
NT5C-201ENST00000245552 TARBP1Q13395 1621 aaKnown RBP38.21■■■■□ 3.71
NT5C-201ENST00000245552 AQRO60306 1485 aaKnown RBP eCLIP38.17■■■■□ 3.73e-9■■■■□ 21.3
NT5C-201ENST00000245552 CHD1O14646 1710 aa38.15■■■■□ 3.7
NT5C-201ENST00000245552 POLA1P09884 1462 aaPredicted RBP38.11■■■■□ 3.69
NT5C-201ENST00000245552 FBLN2P98095 1184 aa38■■■■□ 3.67
NT5C-201ENST00000245552 RAD54L2Q9Y4B4 1467 aa37.99■■■■□ 3.67
NT5C-201ENST00000245552 CYB5RLQ6IPT4 315 aa37.98■■■■□ 3.67
NT5C-201ENST00000245552 SOGA1O94964 1423 aa37.94■■■■□ 3.66
NT5C-201ENST00000245552 TDRD9Q8NDG6 1382 aaKnown RBP37.9■■■■□ 3.66
NT5C-201ENST00000245552 FGD5Q6ZNL6 1462 aa37.85■■■■□ 3.65
NT5C-201ENST00000245552 ARAP1Q96P48 1450 aa37.84■■■■□ 3.65
NT5C-201ENST00000245552 WDR97A6NE52 1622 aa37.79■■■■□ 3.64
NT5C-201ENST00000245552 SNAPC4Q5SXM2 1469 aa37.78■■■■□ 3.64
NT5C-201ENST00000245552 CUX1P39880 1505 aa37.77■■■■□ 3.64
NT5C-201ENST00000245552 MAGI1Q96QZ7 1491 aaPredicted RBP37.66■■■■□ 3.62
NT5C-201ENST00000245552 TRHP20396 242 aaPredicted RBP37.66■■■■□ 3.62
NT5C-201ENST00000245552 CHMP7Q8WUX9 453 aaPredicted RBP37.66■■■■□ 3.62
NT5C-201ENST00000245552 CLASP1Q7Z460 1538 aa37.65■■■■□ 3.62
NT5C-201ENST00000245552 GRIN2BQ13224 1484 aa37.64■■■■□ 3.62
NT5C-201ENST00000245552 SYNJ1O43426 1573 aa37.63■■■■□ 3.61
NT5C-201ENST00000245552 SYNJ2O15056 1496 aa37.54■■■■□ 3.6
NT5C-201ENST00000245552 PBRM1Q86U86 1689 aa37.53■■■■□ 3.6
NT5C-201ENST00000245552 GAPVD1Q14C86 1478 aa37.47■■■■□ 3.59
NT5C-201ENST00000245552 ABCA10Q8WWZ4 1543 aa37.38■■■■□ 3.57
NT5C-201ENST00000245552 ABCA5Q8WWZ7 1642 aa37.38■■■■□ 3.57
NT5C-201ENST00000245552 SUPT5HO00267 1087 aaKnown RBP37.35■■■■□ 3.57
NT5C-201ENST00000245552 WRNQ14191 1432 aaPredicted RBP eCLIP37.19■■■■□ 3.54
NT5C-201ENST00000245552 GRIN2AQ12879 1464 aa37.16■■■■□ 3.54
NT5C-201ENST00000245552 BIVM-ERCC5R4GMW8 1640 aa37.12■■■■□ 3.53
NT5C-201ENST00000245552 ADAMTS12P58397 1594 aa37.12■■■■□ 3.53
NT5C-201ENST00000245552 TOP2BQ02880 1626 aa37.1■■■■□ 3.53
NT5C-201ENST00000245552 ERCC6L2Q5T890 1561 aa37.07■■■■□ 3.52
NT5C-201ENST00000245552 CEP170Q5SW79 1584 aa37.05■■■■□ 3.52
NT5C-201ENST00000245552 NUP160Q12769 1436 aa37.02■■■■□ 3.52
NT5C-201ENST00000245552 FHAD1B1AJZ9 1412 aa36.97■■■■□ 3.51
NT5C-201ENST00000245552 ERICH3Q5RHP9 1530 aa36.92■■■■□ 3.5
NT5C-201ENST00000245552 SHROOM2Q13796 1616 aa36.92■■■■□ 3.5
NT5C-201ENST00000245552 AEBP2Q6ZN18 517 aaPredicted RBP36.76■■■■□ 3.48
NT5C-201ENST00000245552 PRG4Q92954 1404 aaPredicted RBP36.7■■■■□ 3.47
NT5C-201ENST00000245552 JPH4Q96JJ6 628 aa36.65■■■■□ 3.46
NT5C-201ENST00000245552 RUSC2Q8N2Y8 1516 aa36.6■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms