Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Q9N2K0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.43■■□□□ 1.02
Q9N2K0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Q9N2K0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Q9N2K0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.43■■□□□ 1.02
Q9N2K0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Q9N2K0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Q9N2K0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Q9N2K0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Q9N2K0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Q9N2K0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.41■■□□□ 1.02
Q9N2K0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Q9N2K0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Q9N2K0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.4■■□□□ 1.02
Q9N2K0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Q9N2K0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Q9N2K0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.4■■□□□ 1.02
Q9N2K0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Q9N2K0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Q9N2K0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Q9N2K0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Q9N2K0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Q9N2K0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.38■■□□□ 1.01
Q9N2K0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Q9N2K0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.38■■□□□ 1.01
Q9N2K0 AC100797.4-201ENST00000631653 1827 ntBASIC21.38■■□□□ 1.01
Q9N2K0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.38■■□□□ 1.01
Q9N2K0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q9N2K0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q9N2K0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.37■■□□□ 1.01
Q9N2K0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q9N2K0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.37■■□□□ 1.01
Q9N2K0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Q9N2K0 LINC01003-201ENST00000564834 1764 ntBASIC21.36■■□□□ 1.01
Q9N2K0 MIR762-201ENST00000390236 83 ntBASIC21.36■■□□□ 1.01
Q9N2K0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Q9N2K0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Q9N2K0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Q9N2K0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Q9N2K0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Q9N2K0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Q9N2K0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Q9N2K0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Q9N2K0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q9N2K0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Q9N2K0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Q9N2K0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Q9N2K0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.33■■□□□ 1.01
Q9N2K0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Q9N2K0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Q9N2K0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.33■■□□□ 1.01
Q9N2K0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Q9N2K0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Q9N2K0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.32■■□□□ 1
Q9N2K0 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.32■■□□□ 1
Q9N2K0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Q9N2K0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Q9N2K0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Q9N2K0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.31■■□□□ 1
Q9N2K0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.31■■□□□ 1
Q9N2K0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Q9N2K0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Q9N2K0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Q9N2K0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Q9N2K0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.3■■□□□ 1
Q9N2K0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.3■■□□□ 1
Q9N2K0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.3■■□□□ 1
Q9N2K0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.3■■□□□ 1
Q9N2K0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Q9N2K0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Q9N2K0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Q9N2K0 AP002414.2-202ENST00000590929 1450 ntBASIC21.28■■□□□ 1
Q9N2K0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Q9N2K0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.28■■□□□ 1
Q9N2K0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Q9N2K0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.27■■□□□ 1
Q9N2K0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.27■■□□□ 1
Q9N2K0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.27■■□□□ 1
Q9N2K0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.27■■□□□ 1
Q9N2K0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Q9N2K0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Q9N2K0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Q9N2K0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.26■□□□□ 0.99
Q9N2K0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Q9N2K0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Q9N2K0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Q9N2K0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Q9N2K0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.25■□□□□ 0.99
Q9N2K0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.24■□□□□ 0.99
Q9N2K0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Q9N2K0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.24■□□□□ 0.99
Q9N2K0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Q9N2K0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Q9N2K0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Q9N2K0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.23■□□□□ 0.99
Q9N2K0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Q9N2K0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q9N2K0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.22■□□□□ 0.99
Q9N2K0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.22■□□□□ 0.99
Q9N2K0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms