Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.12■■■□□ 2.09
ZC3H3Q8IXZ2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZC3H3Q8IXZ2 AC100797.4-201ENST00000631653 1827 ntBASIC28.12■■■□□ 2.09
ZC3H3Q8IXZ2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZC3H3Q8IXZ2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.12■■■□□ 2.09
ZC3H3Q8IXZ2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ZC3H3Q8IXZ2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ZC3H3Q8IXZ2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
ZC3H3Q8IXZ2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.1■■■□□ 2.09
ZC3H3Q8IXZ2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ZC3H3Q8IXZ2 LINC00273-201ENST00000539813 1452 ntBASIC28.09■■■□□ 2.09
ZC3H3Q8IXZ2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
ZC3H3Q8IXZ2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
ZC3H3Q8IXZ2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ZC3H3Q8IXZ2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ZC3H3Q8IXZ2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ZC3H3Q8IXZ2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.08■■■□□ 2.09
ZC3H3Q8IXZ2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ZC3H3Q8IXZ2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
ZC3H3Q8IXZ2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.07■■■□□ 2.08
ZC3H3Q8IXZ2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
ZC3H3Q8IXZ2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
ZC3H3Q8IXZ2 WHAMMP2-203ENST00000563942 1603 ntBASIC28.06■■■□□ 2.08
ZC3H3Q8IXZ2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ZC3H3Q8IXZ2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
ZC3H3Q8IXZ2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ZC3H3Q8IXZ2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
ZC3H3Q8IXZ2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ZC3H3Q8IXZ2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ZC3H3Q8IXZ2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
ZC3H3Q8IXZ2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.04■■■□□ 2.08
ZC3H3Q8IXZ2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.04■■■□□ 2.08
ZC3H3Q8IXZ2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
ZC3H3Q8IXZ2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ZC3H3Q8IXZ2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.03■■■□□ 2.08
ZC3H3Q8IXZ2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.03■■■□□ 2.08
ZC3H3Q8IXZ2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
ZC3H3Q8IXZ2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
ZC3H3Q8IXZ2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ZC3H3Q8IXZ2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ZC3H3Q8IXZ2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
ZC3H3Q8IXZ2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.01■■■□□ 2.07
ZC3H3Q8IXZ2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ZC3H3Q8IXZ2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
ZC3H3Q8IXZ2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28■■■□□ 2.07
ZC3H3Q8IXZ2 RPS2P35-201ENST00000443417 897 ntBASIC28■■■□□ 2.07
ZC3H3Q8IXZ2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28■■■□□ 2.07
ZC3H3Q8IXZ2 AC044849.2-201ENST00000606596 710 ntBASIC28■■■□□ 2.07
ZC3H3Q8IXZ2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28■■■□□ 2.07
ZC3H3Q8IXZ2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.99■■■□□ 2.07
ZC3H3Q8IXZ2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
ZC3H3Q8IXZ2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
ZC3H3Q8IXZ2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
ZC3H3Q8IXZ2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
ZC3H3Q8IXZ2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
ZC3H3Q8IXZ2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
ZC3H3Q8IXZ2 AP002414.2-202ENST00000590929 1450 ntBASIC27.97■■■□□ 2.07
ZC3H3Q8IXZ2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.96■■■□□ 2.07
ZC3H3Q8IXZ2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.96■■■□□ 2.07
ZC3H3Q8IXZ2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ZC3H3Q8IXZ2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
ZC3H3Q8IXZ2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.94■■■□□ 2.06
ZC3H3Q8IXZ2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.94■■■□□ 2.06
ZC3H3Q8IXZ2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.93■■■□□ 2.06
ZC3H3Q8IXZ2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
ZC3H3Q8IXZ2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.93■■■□□ 2.06
ZC3H3Q8IXZ2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
ZC3H3Q8IXZ2 BX255925.1-201ENST00000566954 1854 ntBASIC27.93■■■□□ 2.06
ZC3H3Q8IXZ2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
ZC3H3Q8IXZ2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
ZC3H3Q8IXZ2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
ZC3H3Q8IXZ2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.92■■■□□ 2.06
ZC3H3Q8IXZ2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
ZC3H3Q8IXZ2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
ZC3H3Q8IXZ2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.9■■■□□ 2.06
ZC3H3Q8IXZ2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
ZC3H3Q8IXZ2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
ZC3H3Q8IXZ2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.89■■■□□ 2.05
ZC3H3Q8IXZ2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
ZC3H3Q8IXZ2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
ZC3H3Q8IXZ2 LINC01003-201ENST00000564834 1764 ntBASIC27.88■■■□□ 2.05
ZC3H3Q8IXZ2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
ZC3H3Q8IXZ2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
ZC3H3Q8IXZ2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.87■■■□□ 2.05
ZC3H3Q8IXZ2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.87■■■□□ 2.05
ZC3H3Q8IXZ2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
ZC3H3Q8IXZ2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
ZC3H3Q8IXZ2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.87■■■□□ 2.05
ZC3H3Q8IXZ2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
ZC3H3Q8IXZ2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
ZC3H3Q8IXZ2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.86■■■□□ 2.05
ZC3H3Q8IXZ2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
ZC3H3Q8IXZ2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
ZC3H3Q8IXZ2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.86■■■□□ 2.05
ZC3H3Q8IXZ2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
ZC3H3Q8IXZ2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
ZC3H3Q8IXZ2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
ZC3H3Q8IXZ2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
ZC3H3Q8IXZ2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
ZC3H3Q8IXZ2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms