Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.13■■■■□ 3.53
ZC3H3Q8IXZ2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.52
ZC3H3Q8IXZ2 AL356512.1-201ENST00000607453 1739 ntBASIC36.42■■■■□ 3.42
ZC3H3Q8IXZ2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.26■■■■□ 3.39
ZC3H3Q8IXZ2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC36.18■■■■□ 3.38
ZC3H3Q8IXZ2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC36■■■■□ 3.35
ZC3H3Q8IXZ2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
ZC3H3Q8IXZ2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
ZC3H3Q8IXZ2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.86■■■■□ 3.33
ZC3H3Q8IXZ2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.43■■■■□ 3.26
ZC3H3Q8IXZ2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.35■■■■□ 3.25
ZC3H3Q8IXZ2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.19■■■■□ 3.22
ZC3H3Q8IXZ2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
ZC3H3Q8IXZ2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.94■■■■□ 3.18
ZC3H3Q8IXZ2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.71■■■■□ 3.15
ZC3H3Q8IXZ2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
ZC3H3Q8IXZ2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC34.48■■■■□ 3.11
ZC3H3Q8IXZ2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC34.47■■■■□ 3.11
ZC3H3Q8IXZ2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.4■■■■□ 3.1
ZC3H3Q8IXZ2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ZC3H3Q8IXZ2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.24■■■■□ 3.07
ZC3H3Q8IXZ2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC34.18■■■■□ 3.06
ZC3H3Q8IXZ2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.15■■■■□ 3.06
ZC3H3Q8IXZ2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.08■■■■□ 3.05
ZC3H3Q8IXZ2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.07■■■■□ 3.05
ZC3H3Q8IXZ2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.92■■■■□ 3.02
ZC3H3Q8IXZ2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
ZC3H3Q8IXZ2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
ZC3H3Q8IXZ2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.86■■■■□ 3.01
ZC3H3Q8IXZ2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.85■■■■□ 3.01
ZC3H3Q8IXZ2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
ZC3H3Q8IXZ2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
ZC3H3Q8IXZ2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
ZC3H3Q8IXZ2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.58■■■□□ 2.97
ZC3H3Q8IXZ2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.51■■■□□ 2.96
ZC3H3Q8IXZ2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.5■■■□□ 2.95
ZC3H3Q8IXZ2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
ZC3H3Q8IXZ2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.48■■■□□ 2.95
ZC3H3Q8IXZ2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
ZC3H3Q8IXZ2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
ZC3H3Q8IXZ2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.2■■■□□ 2.9
ZC3H3Q8IXZ2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.09■■■□□ 2.89
ZC3H3Q8IXZ2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.03■■■□□ 2.88
ZC3H3Q8IXZ2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.98■■■□□ 2.87
ZC3H3Q8IXZ2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.94■■■□□ 2.86
ZC3H3Q8IXZ2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.86
ZC3H3Q8IXZ2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
ZC3H3Q8IXZ2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.82■■■□□ 2.84
ZC3H3Q8IXZ2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
ZC3H3Q8IXZ2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.84
ZC3H3Q8IXZ2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.79■■■□□ 2.84
ZC3H3Q8IXZ2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.78■■■□□ 2.84
ZC3H3Q8IXZ2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
ZC3H3Q8IXZ2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
ZC3H3Q8IXZ2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
ZC3H3Q8IXZ2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ZC3H3Q8IXZ2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
ZC3H3Q8IXZ2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
ZC3H3Q8IXZ2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.54■■■□□ 2.8
ZC3H3Q8IXZ2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
ZC3H3Q8IXZ2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.52■■■□□ 2.8
ZC3H3Q8IXZ2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.5■■■□□ 2.79
ZC3H3Q8IXZ2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
ZC3H3Q8IXZ2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
ZC3H3Q8IXZ2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.42■■■□□ 2.78
ZC3H3Q8IXZ2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
ZC3H3Q8IXZ2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
ZC3H3Q8IXZ2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
ZC3H3Q8IXZ2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
ZC3H3Q8IXZ2 AC015813.7-201ENST00000623294 581 ntBASIC32.29■■■□□ 2.76
ZC3H3Q8IXZ2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
ZC3H3Q8IXZ2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
ZC3H3Q8IXZ2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
ZC3H3Q8IXZ2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
ZC3H3Q8IXZ2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
ZC3H3Q8IXZ2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
ZC3H3Q8IXZ2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.06■■■□□ 2.72
ZC3H3Q8IXZ2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.02■■■□□ 2.72
ZC3H3Q8IXZ2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
ZC3H3Q8IXZ2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32■■■□□ 2.71
ZC3H3Q8IXZ2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
ZC3H3Q8IXZ2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
ZC3H3Q8IXZ2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
ZC3H3Q8IXZ2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.7
ZC3H3Q8IXZ2 AC145285.7-201ENST00000614819 1539 ntBASIC31.92■■■□□ 2.7
ZC3H3Q8IXZ2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ZC3H3Q8IXZ2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
ZC3H3Q8IXZ2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.76■■■□□ 2.67
ZC3H3Q8IXZ2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.73■■■□□ 2.67
ZC3H3Q8IXZ2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ZC3H3Q8IXZ2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.7■■■□□ 2.67
ZC3H3Q8IXZ2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
ZC3H3Q8IXZ2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
ZC3H3Q8IXZ2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
ZC3H3Q8IXZ2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ZC3H3Q8IXZ2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ZC3H3Q8IXZ2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ZC3H3Q8IXZ2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
ZC3H3Q8IXZ2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
ZC3H3Q8IXZ2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms