RNA–Protein interactions for RNA: ENST00000436066.3

PLEKHF1-201, Transcript of pleckstrin homology and FYVE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLEKHF1, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHF1-201ENST00000436066 NISCHQ9Y2I1 1504 aa54.56■■■■■ 6.32
PLEKHF1-201ENST00000436066 CCDC180Q9P1Z9 1646 aa46.91■■■■■ 5.1
PLEKHF1-201ENST00000436066 ZCCHC6Q5VYS8 1495 aaKnown RBP46.02■■■■■ 4.96
PLEKHF1-201ENST00000436066 SHROOM4Q9ULL8 1493 aa45.64■■■■■ 4.9
PLEKHF1-201ENST00000436066 DCAF8L2P0C7V8 631 aa45.14■■■■■ 4.82
PLEKHF1-201ENST00000436066 DCAF1Q9Y4B6 1507 aa44.92■■■■■ 4.78
PLEKHF1-201ENST00000436066 SUPT5HO00267 1087 aaKnown RBP44.42■■■■■ 4.7
PLEKHF1-201ENST00000436066 MYO15BQ96JP2 1530 aa43.95■■■■■ 4.63
PLEKHF1-201ENST00000436066 ABCC9O60706 1549 aa43.8■■■■■ 4.6
PLEKHF1-201ENST00000436066 SCRIBQ14160 1630 aa43.6■■■■■ 4.57
PLEKHF1-201ENST00000436066 NACADO15069 1562 aa43.5■■■■■ 4.55
PLEKHF1-201ENST00000436066 RB1CC1Q8TDY2 1594 aa42.93■■■■■ 4.46
PLEKHF1-201ENST00000436066 CHIC1Q5VXU3 224 aa42.92■■■■■ 4.46
PLEKHF1-201ENST00000436066 RSF1Q96T23 1441 aaPredicted RBP42.81■■■■■ 4.44
PLEKHF1-201ENST00000436066 CECR2Q9BXF3 1484 aa42.48■■■■■ 4.39
PLEKHF1-201ENST00000436066 MROH2BQ7Z745 1585 aa42.3■■■■■ 4.36
PLEKHF1-201ENST00000436066 UNC13AQ9UPW8 1703 aa42.2■■■■■ 4.35
PLEKHF1-201ENST00000436066 WIZO95785 1651 aa42.04■■■■■ 4.32
PLEKHF1-201ENST00000436066 BAZ1AQ9NRL2 1556 aaPredicted RBP42.01■■■■■ 4.32
PLEKHF1-201ENST00000436066 SMARCA4P51532 1647 aa41.73■■■■■ 4.27
PLEKHF1-201ENST00000436066 BICRAQ9NZM4 1560 aa41.7■■■■■ 4.27
PLEKHF1-201ENST00000436066 PABPN1Q86U42 306 aaKnown RBP eCLIP41.64■■■■■ 4.26
PLEKHF1-201ENST00000436066 TRIM41Q8WV44 630 aa41.56■■■■■ 4.24
PLEKHF1-201ENST00000436066 LOC105371045A0A1W2PR82 267 aa41.49■■■■■ 4.23
PLEKHF1-201ENST00000436066 TOP2AP11388 1531 aaKnown RBP41.47■■■■■ 4.23
PLEKHF1-201ENST00000436066 EIF4G1Q04637 1599 aaKnown RBP41.22■■■■■ 4.19
PLEKHF1-201ENST00000436066 CCDC88BA6NC98 1476 aa41.18■■■■■ 4.18
PLEKHF1-201ENST00000436066 SMARCA2P51531 1590 aa41.18■■■■■ 4.18
PLEKHF1-201ENST00000436066 PEG3Q9GZU2 1588 aa41.05■■■■■ 4.16
PLEKHF1-201ENST00000436066 FAM9AQ8IZU1 332 aaPredicted RBP41.02■■■■■ 4.16
PLEKHF1-201ENST00000436066 ATAD2BQ9ULI0 1458 aa40.8■■■■■ 4.12
PLEKHF1-201ENST00000436066 ABCC8Q09428 1581 aa40.76■■■■■ 4.12
PLEKHF1-201ENST00000436066 PCGF6Q9BYE7 350 aa40.7■■■■■ 4.11
PLEKHF1-201ENST00000436066 BAZ1BQ9UIG0 1483 aaKnown RBP40.65■■■■■ 4.1
PLEKHF1-201ENST00000436066 EHMT2Q96KQ7 1210 aa40.57■■■■■ 4.09
PLEKHF1-201ENST00000436066 WRNQ14191 1432 aaPredicted RBP eCLIP40.25■■■■■ 4.03
PLEKHF1-201ENST00000436066 HRCP23327 699 aa40.25■■■■■ 4.03
PLEKHF1-201ENST00000436066 TRIM26Q12899 539 aaPredicted RBP40.25■■■■■ 4.03
PLEKHF1-201ENST00000436066 SOGA1O94964 1423 aa40.22■■■■■ 4.03
PLEKHF1-201ENST00000436066 NCAPD3P42695 1498 aa40.2■■■■■ 4.03
PLEKHF1-201ENST00000436066 HMGXB3Q12766 1538 aa40.18■■■■■ 4.02
PLEKHF1-201ENST00000436066 EEA1Q15075 1411 aa40.09■■■■■ 4.01
PLEKHF1-201ENST00000436066 SYNJ1O43426 1573 aa40.07■■■■■ 4.01
PLEKHF1-201ENST00000436066 RUSC2Q8N2Y8 1516 aa40.03■■■■■ 4
PLEKHF1-201ENST00000436066 CSRNP3Q8WYN3 585 aa39.97■■■■□ 3.99
PLEKHF1-201ENST00000436066 TNIKQ9UKE5 1360 aa39.78■■■■□ 3.96
PLEKHF1-201ENST00000436066 TOP2BQ02880 1626 aa39.73■■■■□ 3.95
PLEKHF1-201ENST00000436066 CEP162Q5TB80 1403 aa39.72■■■■□ 3.95
PLEKHF1-201ENST00000436066 GOLGA3Q08378 1498 aa39.7■■■■□ 3.95
PLEKHF1-201ENST00000436066 UBTFP17480 764 aaKnown RBP39.67■■■■□ 3.94
PLEKHF1-201ENST00000436066 BIVM-ERCC5R4GMW8 1640 aa39.64■■■■□ 3.94
PLEKHF1-201ENST00000436066 CFTRP13569 1480 aa39.64■■■■□ 3.94
PLEKHF1-201ENST00000436066 PPARGC1BQ86YN6 1023 aaKnown RBP39.58■■■■□ 3.93
PLEKHF1-201ENST00000436066 CEP164Q9UPV0 1460 aa39.58■■■■□ 3.93
PLEKHF1-201ENST00000436066 KIF21BO75037 1637 aa39.56■■■■□ 3.92
PLEKHF1-201ENST00000436066 CC2D2AQ9P2K1 1620 aa39.55■■■■□ 3.92
PLEKHF1-201ENST00000436066 CUX1P39880 1505 aa39.45■■■■□ 3.91
PLEKHF1-201ENST00000436066 PRDM2Q13029 1718 aa39.39■■■■□ 3.9
PLEKHF1-201ENST00000436066 CADPSQ9ULU8 1353 aa39.33■■■■□ 3.89
PLEKHF1-201ENST00000436066 RAPGEF2Q9Y4G8 1499 aa39.3■■■■□ 3.88
PLEKHF1-201ENST00000436066 CLIP1P30622 1438 aa39.16■■■■□ 3.86
PLEKHF1-201ENST00000436066 KIF27Q86VH2 1401 aa39.11■■■■□ 3.85
PLEKHF1-201ENST00000436066 PRXQ9BXM0 1461 aa39.1■■■■□ 3.85
PLEKHF1-201ENST00000436066 ZEB1P37275 1124 aaPredicted RBP39.09■■■■□ 3.85
PLEKHF1-201ENST00000436066 TTBK1Q5TCY1 1321 aaPredicted RBP39.08■■■■□ 3.85
PLEKHF1-201ENST00000436066 ERICH3Q5RHP9 1530 aa39.07■■■■□ 3.85
PLEKHF1-201ENST00000436066 FANCD2Q9BXW9 1451 aa38.93■■■■□ 3.82
PLEKHF1-201ENST00000436066 RANGAP1P46060 587 aaPredicted RBP38.93■■■■□ 3.82
PLEKHF1-201ENST00000436066 VPS8Q8N3P4 1428 aa38.92■■■■□ 3.82
PLEKHF1-201ENST00000436066 FGD5Q6ZNL6 1462 aa38.87■■■■□ 3.81
PLEKHF1-201ENST00000436066 CUX2O14529 1486 aa38.85■■■■□ 3.81
PLEKHF1-201ENST00000436066 NESP48681 1621 aa38.8■■■■□ 3.8
PLEKHF1-201ENST00000436066 IGF1RP08069 1367 aa38.7■■■■□ 3.79
PLEKHF1-201ENST00000436066 DNMBPQ6XZF7 1577 aa38.68■■■■□ 3.78
PLEKHF1-201ENST00000436066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.68■■■■□ 3.78
PLEKHF1-201ENST00000436066 APLP2Q06481 763 aa38.67■■■■□ 3.78
PLEKHF1-201ENST00000436066 LAMC3Q9Y6N6 1575 aa38.64■■■■□ 3.78
PLEKHF1-201ENST00000436066 ARAP1Q96P48 1450 aa38.63■■■■□ 3.77
PLEKHF1-201ENST00000436066 TOPBP1Q92547 1522 aa38.6■■■■□ 3.77
PLEKHF1-201ENST00000436066 CCER1Q8TC90 406 aaPredicted RBP38.59■■■■□ 3.77
PLEKHF1-201ENST00000436066 CARMIL1Q5VZK9 1371 aa38.54■■■■□ 3.76
PLEKHF1-201ENST00000436066 POLA1P09884 1462 aaPredicted RBP38.52■■■■□ 3.76
PLEKHF1-201ENST00000436066 RAD54L2Q9Y4B4 1467 aa38.5■■■■□ 3.75
PLEKHF1-201ENST00000436066 DNAJC5BQ9UF47 199 aa38.5■■■■□ 3.75
PLEKHF1-201ENST00000436066 ABCA10Q8WWZ4 1543 aa38.46■■■■□ 3.75
PLEKHF1-201ENST00000436066 ARHGAP35Q9NRY4 1499 aa38.44■■■■□ 3.74
PLEKHF1-201ENST00000436066 URB2Q14146 1524 aaKnown RBP38.39■■■■□ 3.74
PLEKHF1-201ENST00000436066 PDS5BQ9NTI5 1447 aa38.37■■■■□ 3.73
PLEKHF1-201ENST00000436066 HNRNPUL2Q1KMD3 747 aaKnown RBP38.26■■■■□ 3.71
PLEKHF1-201ENST00000436066 KIF21AQ7Z4S6 1674 aa38.23■■■■□ 3.71
PLEKHF1-201ENST00000436066 KANK4Q5T7N3 995 aaPredicted RBP38.21■■■■□ 3.71
PLEKHF1-201ENST00000436066 WDR97A6NE52 1622 aa38.21■■■■□ 3.71
PLEKHF1-201ENST00000436066 CUL7Q14999 1698 aa38.18■■■■□ 3.7
PLEKHF1-201ENST00000436066 TDRD9Q8NDG6 1382 aaKnown RBP38.07■■■■□ 3.68
PLEKHF1-201ENST00000436066 ABCA5Q8WWZ7 1642 aa38.06■■■■□ 3.68
PLEKHF1-201ENST00000436066 GAPVD1Q14C86 1478 aa38■■■■□ 3.67
PLEKHF1-201ENST00000436066 CTTNBP2Q8WZ74 1663 aa37.96■■■■□ 3.67
PLEKHF1-201ENST00000436066 P3H3Q8IVL6 736 aa37.93■■■■□ 3.66
PLEKHF1-201ENST00000436066 FHAD1B1AJZ9 1412 aa37.93■■■■□ 3.66
PLEKHF1-201ENST00000436066 TIAM1Q13009 1591 aa37.92■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms