Protein–RNA interactions for Protein: Q6P1A2

LPCAT3, Lysophospholipid acyltransferase 5, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3Q6P1A2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LPCAT3Q6P1A2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.5■■□□□ 1.03
LPCAT3Q6P1A2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.5■■□□□ 1.03
LPCAT3Q6P1A2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LPCAT3Q6P1A2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
LPCAT3Q6P1A2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LPCAT3Q6P1A2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
LPCAT3Q6P1A2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LPCAT3Q6P1A2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LPCAT3Q6P1A2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LPCAT3Q6P1A2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.49■■□□□ 1.03
LPCAT3Q6P1A2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LPCAT3Q6P1A2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
LPCAT3Q6P1A2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LPCAT3Q6P1A2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LPCAT3Q6P1A2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LPCAT3Q6P1A2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LPCAT3Q6P1A2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
LPCAT3Q6P1A2 AL133380.1-201ENST00000506013 324 ntBASIC21.48■■□□□ 1.03
LPCAT3Q6P1A2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.48■■□□□ 1.03
LPCAT3Q6P1A2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LPCAT3Q6P1A2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.47■■□□□ 1.03
LPCAT3Q6P1A2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LPCAT3Q6P1A2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LPCAT3Q6P1A2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.46■■□□□ 1.03
LPCAT3Q6P1A2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LPCAT3Q6P1A2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
LPCAT3Q6P1A2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.45■■□□□ 1.02
LPCAT3Q6P1A2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LPCAT3Q6P1A2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.45■■□□□ 1.02
LPCAT3Q6P1A2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
LPCAT3Q6P1A2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LPCAT3Q6P1A2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.45■■□□□ 1.02
LPCAT3Q6P1A2 AP004833.2-201ENST00000532228 1454 ntBASIC21.45■■□□□ 1.02
LPCAT3Q6P1A2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
LPCAT3Q6P1A2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LPCAT3Q6P1A2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
LPCAT3Q6P1A2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.44■■□□□ 1.02
LPCAT3Q6P1A2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
LPCAT3Q6P1A2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.43■■□□□ 1.02
LPCAT3Q6P1A2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LPCAT3Q6P1A2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LPCAT3Q6P1A2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.43■■□□□ 1.02
LPCAT3Q6P1A2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LPCAT3Q6P1A2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LPCAT3Q6P1A2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LPCAT3Q6P1A2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LPCAT3Q6P1A2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.42■■□□□ 1.02
LPCAT3Q6P1A2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LPCAT3Q6P1A2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
LPCAT3Q6P1A2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.41■■□□□ 1.02
LPCAT3Q6P1A2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.41■■□□□ 1.02
LPCAT3Q6P1A2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LPCAT3Q6P1A2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LPCAT3Q6P1A2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LPCAT3Q6P1A2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.4■■□□□ 1.02
LPCAT3Q6P1A2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LPCAT3Q6P1A2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LPCAT3Q6P1A2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.4■■□□□ 1.02
LPCAT3Q6P1A2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LPCAT3Q6P1A2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.39■■□□□ 1.02
LPCAT3Q6P1A2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LPCAT3Q6P1A2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
LPCAT3Q6P1A2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.39■■□□□ 1.01
LPCAT3Q6P1A2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LPCAT3Q6P1A2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.38■■□□□ 1.01
LPCAT3Q6P1A2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LPCAT3Q6P1A2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LPCAT3Q6P1A2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.38■■□□□ 1.01
LPCAT3Q6P1A2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LPCAT3Q6P1A2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT3Q6P1A2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT3Q6P1A2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT3Q6P1A2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LPCAT3Q6P1A2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
LPCAT3Q6P1A2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LPCAT3Q6P1A2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.36■■□□□ 1.01
LPCAT3Q6P1A2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.36■■□□□ 1.01
LPCAT3Q6P1A2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LPCAT3Q6P1A2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LPCAT3Q6P1A2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.34■■□□□ 1.01
LPCAT3Q6P1A2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LPCAT3Q6P1A2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.34■■□□□ 1.01
LPCAT3Q6P1A2 LINC01003-201ENST00000564834 1764 ntBASIC21.33■■□□□ 1.01
LPCAT3Q6P1A2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LPCAT3Q6P1A2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LPCAT3Q6P1A2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.33■■□□□ 1.01
LPCAT3Q6P1A2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
LPCAT3Q6P1A2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.33■■□□□ 1
LPCAT3Q6P1A2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
LPCAT3Q6P1A2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LPCAT3Q6P1A2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.32■■□□□ 1
LPCAT3Q6P1A2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LPCAT3Q6P1A2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.32■■□□□ 1
LPCAT3Q6P1A2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LPCAT3Q6P1A2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.32■■□□□ 1
LPCAT3Q6P1A2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.32■■□□□ 1
LPCAT3Q6P1A2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LPCAT3Q6P1A2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LPCAT3Q6P1A2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms