RNA–Protein interactions for RNA: ENST00000398398.6

MBD2-202, Transcript of methyl-CpG binding domain protein 2, humanhuman

TSL 2 BASIC

Gene MBD2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD2-202ENST00000398398 NISCHQ9Y2I1 1504 aa71.31■■■■■ 9.01
MBD2-202ENST00000398398 CCDC180Q9P1Z9 1646 aa63.75■■■■■ 7.8
MBD2-202ENST00000398398 ABCC9O60706 1549 aa63.69■■■■■ 7.79
MBD2-202ENST00000398398 RB1CC1Q8TDY2 1594 aa60.65■■■■■ 7.3
MBD2-202ENST00000398398 DCAF8L2P0C7V8 631 aa60.34■■■■■ 7.25
MBD2-202ENST00000398398 NACADO15069 1562 aa60.29■■■■■ 7.24
MBD2-202ENST00000398398 DNAJC5BQ9UF47 199 aa59.55■■■■■ 7.12
MBD2-202ENST00000398398 MYO15BQ96JP2 1530 aa59.5■■■■■ 7.12
MBD2-202ENST00000398398 PABPN1Q86U42 306 aaKnown RBP eCLIP59.44■■■■■ 7.11
MBD2-202ENST00000398398 UNC13AQ9UPW8 1703 aa59.15■■■■■ 7.06
MBD2-202ENST00000398398 ZCCHC6Q5VYS8 1495 aaKnown RBP59.12■■■■■ 7.05
MBD2-202ENST00000398398 DCAF1Q9Y4B6 1507 aa58.85■■■■■ 7.01
MBD2-202ENST00000398398 BICRAQ9NZM4 1560 aa58.84■■■■■ 7.01
MBD2-202ENST00000398398 SCRIBQ14160 1630 aa58.23■■■■■ 6.91
MBD2-202ENST00000398398 SHROOM4Q9ULL8 1493 aa58.04■■■■■ 6.88
MBD2-202ENST00000398398 CC2D2AQ9P2K1 1620 aa57.47■■■■■ 6.79
MBD2-202ENST00000398398 EIF4G1Q04637 1599 aaKnown RBP57.41■■■■■ 6.78
MBD2-202ENST00000398398 CECR2Q9BXF3 1484 aa57.33■■■■■ 6.77
MBD2-202ENST00000398398 NCAPD3P42695 1498 aa55.69■■■■■ 6.51
MBD2-202ENST00000398398 ATAD2BQ9ULI0 1458 aa55.57■■■■■ 6.49
MBD2-202ENST00000398398 SMARCA4P51532 1647 aa55.53■■■■■ 6.48
MBD2-202ENST00000398398 SMARCA2P51531 1590 aa55.4■■■■■ 6.46
MBD2-202ENST00000398398 BAZ1AQ9NRL2 1556 aaPredicted RBP55.32■■■■■ 6.45
MBD2-202ENST00000398398 HMGXB3Q12766 1538 aa55.24■■■■■ 6.43
MBD2-202ENST00000398398 BAZ1BQ9UIG0 1483 aaKnown RBP55.07■■■■■ 6.41
MBD2-202ENST00000398398 ERCC6Q03468 1493 aa54.98■■■■■ 6.39
MBD2-202ENST00000398398 MROH2BQ7Z745 1585 aa54.97■■■■■ 6.39
MBD2-202ENST00000398398 PEG3Q9GZU2 1588 aa54.94■■■■■ 6.39
MBD2-202ENST00000398398 NESP48681 1621 aa54.77■■■■■ 6.36
MBD2-202ENST00000398398 CUX2O14529 1486 aa54.71■■■■■ 6.35
MBD2-202ENST00000398398 DNAJC5Q9H3Z4 198 aa54.47■■■■■ 6.31
MBD2-202ENST00000398398 LAMC3Q9Y6N6 1575 aa54.35■■■■■ 6.29
MBD2-202ENST00000398398 WIZO95785 1651 aa54.3■■■■■ 6.28
MBD2-202ENST00000398398 PDS5BQ9NTI5 1447 aa54.13■■■■■ 6.26
MBD2-202ENST00000398398 CADPSQ9ULU8 1353 aa54.07■■■■■ 6.25
MBD2-202ENST00000398398 THOC2Q8NI27 1593 aaKnown RBP54.04■■■■■ 6.24
MBD2-202ENST00000398398 KIF21AQ7Z4S6 1674 aa53.96■■■■■ 6.23
MBD2-202ENST00000398398 RSF1Q96T23 1441 aaPredicted RBP53.95■■■■■ 6.23
MBD2-202ENST00000398398 TOP2AP11388 1531 aaKnown RBP53.62■■■■■ 6.17
MBD2-202ENST00000398398 MRC2Q9UBG0 1479 aa53.6■■■■■ 6.17
MBD2-202ENST00000398398 CFTRP13569 1480 aa53.45■■■■■ 6.15
MBD2-202ENST00000398398 CEP164Q9UPV0 1460 aa53.45■■■■■ 6.15
MBD2-202ENST00000398398 FANCD2Q9BXW9 1451 aa53.43■■■■■ 6.14
MBD2-202ENST00000398398 WDR62O43379 1518 aa53.41■■■■■ 6.14
MBD2-202ENST00000398398 CCDC88BA6NC98 1476 aa53.08■■■■■ 6.09
MBD2-202ENST00000398398 URB2Q14146 1524 aaKnown RBP52.95■■■■■ 6.07
MBD2-202ENST00000398398 PRDM2Q13029 1718 aa52.77■■■■■ 6.04
MBD2-202ENST00000398398 TOPBP1Q92547 1522 aa52.43■■■■■ 5.98
MBD2-202ENST00000398398 OSCARQ8IYS5 282 aa52.39■■■■■ 5.98
MBD2-202ENST00000398398 IFT140Q96RY7 1462 aa52.37■■■■■ 5.97
MBD2-202ENST00000398398 ABCC8Q09428 1581 aa52.34■■■■■ 5.97
MBD2-202ENST00000398398 TRIM41Q8WV44 630 aa52.31■■■■■ 5.96
MBD2-202ENST00000398398 ZNF608Q9ULD9 1512 aaPredicted RBP52.28■■■■■ 5.96
MBD2-202ENST00000398398 DNMBPQ6XZF7 1577 aa52.23■■■■■ 5.95
MBD2-202ENST00000398398 SUPT5HO00267 1087 aaKnown RBP51.94■■■■■ 5.91
MBD2-202ENST00000398398 EIF4G3O43432 1585 aaKnown RBP51.93■■■■■ 5.9
MBD2-202ENST00000398398 POLA1P09884 1462 aaPredicted RBP51.91■■■■■ 5.9
MBD2-202ENST00000398398 AQRO60306 1485 aaKnown RBP eCLIP51.89■■■■■ 5.9
MBD2-202ENST00000398398 TARBP1Q13395 1621 aaKnown RBP51.88■■■■■ 5.9
MBD2-202ENST00000398398 RAD54L2Q9Y4B4 1467 aa51.77■■■■■ 5.88
MBD2-202ENST00000398398 SOGA1O94964 1423 aa51.75■■■■■ 5.88
MBD2-202ENST00000398398 TDRD9Q8NDG6 1382 aaKnown RBP51.64■■■■■ 5.86
MBD2-202ENST00000398398 FGD5Q6ZNL6 1462 aa51.64■■■■■ 5.86
MBD2-202ENST00000398398 CUX1P39880 1505 aa51.62■■■■■ 5.85
MBD2-202ENST00000398398 FBLN2P98095 1184 aa51.61■■■■■ 5.85
MBD2-202ENST00000398398 RIMBP3CA6NJZ7 1639 aa51.53■■■■■ 5.84
MBD2-202ENST00000398398 RIMBP3BA6NNM3 1639 aa51.53■■■■■ 5.84
MBD2-202ENST00000398398 RIMBP3Q9UFD9 1639 aa51.53■■■■■ 5.84
MBD2-202ENST00000398398 CHD1O14646 1710 aa51.47■■■■■ 5.83
MBD2-202ENST00000398398 ARHGEF11O15085 1522 aa51.43■■■■■ 5.82
MBD2-202ENST00000398398 WDR97A6NE52 1622 aa51.34■■■■■ 5.81
MBD2-202ENST00000398398 SNAPC4Q5SXM2 1469 aa51.33■■■■■ 5.81
MBD2-202ENST00000398398 CHMP7Q8WUX9 453 aaPredicted RBP51.23■■■■■ 5.79
MBD2-202ENST00000398398 GRIN2BQ13224 1484 aa51.22■■■■■ 5.79
MBD2-202ENST00000398398 CYB5RLQ6IPT4 315 aa51.19■■■■■ 5.79
MBD2-202ENST00000398398 MAGI1Q96QZ7 1491 aaPredicted RBP51.16■■■■■ 5.78
MBD2-202ENST00000398398 GAPVD1Q14C86 1478 aa51.1■■■■■ 5.77
MBD2-202ENST00000398398 ABCA10Q8WWZ4 1543 aa51.04■■■■■ 5.76
MBD2-202ENST00000398398 SYNJ2O15056 1496 aa51.01■■■■■ 5.76
MBD2-202ENST00000398398 WRNQ14191 1432 aaPredicted RBP eCLIP50.96■■■■■ 5.75
MBD2-202ENST00000398398 ARAP1Q96P48 1450 aa50.95■■■■■ 5.75
MBD2-202ENST00000398398 SYNJ1O43426 1573 aa50.94■■■■■ 5.75
MBD2-202ENST00000398398 PBRM1Q86U86 1689 aa50.93■■■■■ 5.74
MBD2-202ENST00000398398 CLASP1Q7Z460 1538 aa50.91■■■■■ 5.74
MBD2-202ENST00000398398 ABCA5Q8WWZ7 1642 aa50.88■■■■■ 5.74
MBD2-202ENST00000398398 TOP2BQ02880 1626 aa50.83■■■■■ 5.73
MBD2-202ENST00000398398 BIVM-ERCC5R4GMW8 1640 aa50.79■■■■■ 5.72
MBD2-202ENST00000398398 TRHP20396 242 aaPredicted RBP50.57■■■■■ 5.69
MBD2-202ENST00000398398 GRIN2AQ12879 1464 aa50.55■■■■■ 5.68
MBD2-202ENST00000398398 ADAMTS12P58397 1594 aa50.51■■■■■ 5.68
MBD2-202ENST00000398398 FHAD1B1AJZ9 1412 aa50.45■■■■■ 5.67
MBD2-202ENST00000398398 ERICH3Q5RHP9 1530 aa50.4■■■■■ 5.66
MBD2-202ENST00000398398 NUP160Q12769 1436 aa50.36■■■■■ 5.65
MBD2-202ENST00000398398 CEP170Q5SW79 1584 aa50.32■■■■■ 5.65
MBD2-202ENST00000398398 ERCC6L2Q5T890 1561 aa50.19■■■■■ 5.63
MBD2-202ENST00000398398 SHROOM2Q13796 1616 aa50.03■■■■■ 5.6
MBD2-202ENST00000398398 JPH4Q96JJ6 628 aa49.96■■■■■ 5.59
MBD2-202ENST00000398398 KIF27Q86VH2 1401 aa49.94■■■■■ 5.59
MBD2-202ENST00000398398 PRG4Q92954 1404 aaPredicted RBP49.93■■■■■ 5.58
MBD2-202ENST00000398398 IGF1RP08069 1367 aa49.91■■■■■ 5.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms