RNA–Protein interactions for RNA: ENST00000229769.2

FANCE-201, Transcript of FA complementation group E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FANCE, Length 2,554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCE-201ENST00000229769 NISCHQ9Y2I1 1504 aa47.53■■■■■ 5.2
FANCE-201ENST00000229769 SHROOM4Q9ULL8 1493 aa40.88■■■■■ 4.14
FANCE-201ENST00000229769 SUPT5HO00267 1087 aaKnown RBP40.36■■■■■ 4.05
FANCE-201ENST00000229769 ZCCHC6Q5VYS8 1495 aaKnown RBP40.3■■■■■ 4.04
FANCE-201ENST00000229769 CCDC180Q9P1Z9 1646 aa40.18■■■■■ 4.02
FANCE-201ENST00000229769 HRCP23327 699 aa39.76■■■■□ 3.96
FANCE-201ENST00000229769 MYO15BQ96JP2 1530 aa39.7■■■■□ 3.95
FANCE-201ENST00000229769 CHIC1Q5VXU3 224 aa39.58■■■■□ 3.93
FANCE-201ENST00000229769 DCAF8L2P0C7V8 631 aa39.33■■■■□ 3.89
FANCE-201ENST00000229769 PCGF6Q9BYE7 350 aa39.18■■■■□ 3.86
FANCE-201ENST00000229769 DCAF1Q9Y4B6 1507 aa39■■■■□ 3.83
FANCE-201ENST00000229769 PPARGC1BQ86YN6 1023 aaKnown RBP38.81■■■■□ 3.8
FANCE-201ENST00000229769 LOC105371045A0A1W2PR82 267 aa38.45■■■■□ 3.75
FANCE-201ENST00000229769 TRIM26Q12899 539 aaPredicted RBP38.24■■■■□ 3.71
FANCE-201ENST00000229769 ABCC9O60706 1549 aa38.13■■■■□ 3.69
FANCE-201ENST00000229769 RSF1Q96T23 1441 aaPredicted RBP37.8■■■■□ 3.64
FANCE-201ENST00000229769 SCRIBQ14160 1630 aa37.75■■■■□ 3.63
FANCE-201ENST00000229769 ZEB1P37275 1124 aaPredicted RBP37.75■■■■□ 3.63
FANCE-201ENST00000229769 TRIM41Q8WV44 630 aa37.6■■■■□ 3.61
FANCE-201ENST00000229769 RB1CC1Q8TDY2 1594 aa37.49■■■■□ 3.59
FANCE-201ENST00000229769 PELP1Q8IZL8 1130 aaKnown RBP37.35■■■■□ 3.57
FANCE-201ENST00000229769 FAM9AQ8IZU1 332 aaPredicted RBP37.26■■■■□ 3.56
FANCE-201ENST00000229769 SCAF1Q9H7N4 1312 aaKnown RBP37.15■■■■□ 3.54
FANCE-201ENST00000229769 NACADO15069 1562 aa37.06■■■■□ 3.52
FANCE-201ENST00000229769 CECR2Q9BXF3 1484 aa37.01■■■■□ 3.52
FANCE-201ENST00000229769 MROH2BQ7Z745 1585 aa36.96■■■■□ 3.51
FANCE-201ENST00000229769 EHMT2Q96KQ7 1210 aa36.92■■■■□ 3.5
FANCE-201ENST00000229769 WIZO95785 1651 aa36.79■■■■□ 3.48
FANCE-201ENST00000229769 BAZ1AQ9NRL2 1556 aaPredicted RBP36.63■■■■□ 3.45
FANCE-201ENST00000229769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.55■■■■□ 3.44
FANCE-201ENST00000229769 ACIN1Q9UKV3 1341 aaKnown RBP36.52■■■■□ 3.44
FANCE-201ENST00000229769 CCER1Q8TC90 406 aaPredicted RBP36.49■■■■□ 3.43
FANCE-201ENST00000229769 EIF4G1Q04637 1599 aaKnown RBP36.48■■■■□ 3.43
FANCE-201ENST00000229769 NEUROD1Q13562 356 aa36.39■■■■□ 3.42
FANCE-201ENST00000229769 TOP2AP11388 1531 aaKnown RBP36.25■■■■□ 3.39
FANCE-201ENST00000229769 DIEXFQ68CQ4 756 aaKnown RBP36.24■■■■□ 3.39
FANCE-201ENST00000229769 WRNQ14191 1432 aaPredicted RBP eCLIP36.19■■■■□ 3.38
FANCE-201ENST00000229769 CENPBP07199 599 aaPredicted RBP36.16■■■■□ 3.38
FANCE-201ENST00000229769 ABCC8Q09428 1581 aa36.15■■■■□ 3.38
FANCE-201ENST00000229769 CCDC88BA6NC98 1476 aa36.12■■■■□ 3.37
FANCE-201ENST00000229769 GTF3C3Q9Y5Q9 886 aa36.11■■■■□ 3.37
FANCE-201ENST00000229769 SMARCA4P51532 1647 aa36.1■■■■□ 3.37
FANCE-201ENST00000229769 SMARCA2P51531 1590 aa36.04■■■■□ 3.36
FANCE-201ENST00000229769 CEP162Q5TB80 1403 aa36.03■■■■□ 3.36
FANCE-201ENST00000229769 TNIKQ9UKE5 1360 aa35.95■■■■□ 3.35
FANCE-201ENST00000229769 SOGA1O94964 1423 aa35.92■■■■□ 3.34
FANCE-201ENST00000229769 TTBK1Q5TCY1 1321 aaPredicted RBP35.92■■■■□ 3.34
FANCE-201ENST00000229769 EEA1Q15075 1411 aa35.91■■■■□ 3.34
FANCE-201ENST00000229769 CSRNP3Q8WYN3 585 aa35.82■■■■□ 3.32
FANCE-201ENST00000229769 ZNF316A6NFI3 1004 aaPredicted RBP35.76■■■■□ 3.32
FANCE-201ENST00000229769 UBTFP17480 764 aaKnown RBP35.75■■■■□ 3.31
FANCE-201ENST00000229769 UNC13AQ9UPW8 1703 aa35.75■■■■□ 3.31
FANCE-201ENST00000229769 MYT1Q01538 1121 aa35.7■■■■□ 3.31
FANCE-201ENST00000229769 RUSC2Q8N2Y8 1516 aa35.68■■■■□ 3.3
FANCE-201ENST00000229769 GOLGA3Q08378 1498 aa35.67■■■■□ 3.3
FANCE-201ENST00000229769 YTHDC1Q96MU7 727 aaKnown RBP35.44■■■■□ 3.26
FANCE-201ENST00000229769 CEP164Q9UPV0 1460 aa35.41■■■■□ 3.26
FANCE-201ENST00000229769 PEG3Q9GZU2 1588 aa35.37■■■■□ 3.25
FANCE-201ENST00000229769 MIER1Q8N108 512 aa35.37■■■■□ 3.25
FANCE-201ENST00000229769 KIF21BO75037 1637 aa35.34■■■■□ 3.25
FANCE-201ENST00000229769 PABPN1Q86U42 306 aaKnown RBP eCLIP35.32■■■■□ 3.24
FANCE-201ENST00000229769 SYNJ1O43426 1573 aa35.29■■■■□ 3.24
FANCE-201ENST00000229769 BICRAQ9NZM4 1560 aa35.29■■■■□ 3.24
FANCE-201ENST00000229769 CLIP1P30622 1438 aa35.27■■■■□ 3.24
FANCE-201ENST00000229769 HNRNPUL2Q1KMD3 747 aaKnown RBP35.27■■■■□ 3.24
FANCE-201ENST00000229769 VPS8Q8N3P4 1428 aa35.18■■■■□ 3.22
FANCE-201ENST00000229769 BAZ1BQ9UIG0 1483 aaKnown RBP35.15■■■■□ 3.22
FANCE-201ENST00000229769 APLP2Q06481 763 aa35.14■■■■□ 3.22
FANCE-201ENST00000229769 ATAD2BQ9ULI0 1458 aa35.05■■■■□ 3.2
FANCE-201ENST00000229769 RAPGEF2Q9Y4G8 1499 aa35.03■■■■□ 3.2
FANCE-201ENST00000229769 RANGAP1P46060 587 aaPredicted RBP34.87■■■■□ 3.17
FANCE-201ENST00000229769 TOP2BQ02880 1626 aa34.84■■■■□ 3.17
FANCE-201ENST00000229769 CLSPNQ9HAW4 1339 aa34.82■■■■□ 3.16
FANCE-201ENST00000229769 DHX57Q6P158 1386 aaKnown RBP34.73■■■■□ 3.15
FANCE-201ENST00000229769 ERICH3Q5RHP9 1530 aa34.7■■■■□ 3.15
FANCE-201ENST00000229769 BIVM-ERCC5R4GMW8 1640 aa34.7■■■■□ 3.14
FANCE-201ENST00000229769 PRXQ9BXM0 1461 aa34.64■■■■□ 3.14
FANCE-201ENST00000229769 SUPT16HQ9Y5B9 1047 aaKnown RBP34.6■■■■□ 3.13
FANCE-201ENST00000229769 ARAP1Q96P48 1450 aa34.6■■■■□ 3.13
FANCE-201ENST00000229769 KANK4Q5T7N3 995 aaPredicted RBP34.49■■■■□ 3.11
FANCE-201ENST00000229769 RRBP1Q9P2E9 1410 aaKnown RBP34.43■■■■□ 3.1
FANCE-201ENST00000229769 KIF27Q86VH2 1401 aa34.41■■■■□ 3.1
FANCE-201ENST00000229769 CUX1P39880 1505 aa34.38■■■■□ 3.09
FANCE-201ENST00000229769 CUX2O14529 1486 aa34.37■■■■□ 3.09
FANCE-201ENST00000229769 HMGXB3Q12766 1538 aa34.32■■■■□ 3.09
FANCE-201ENST00000229769 NCAPD3P42695 1498 aa34.28■■■■□ 3.08
FANCE-201ENST00000229769 CCNB3Q8WWL7 1395 aa34.28■■■■□ 3.08
FANCE-201ENST00000229769 TSHZ2Q9NRE2 1034 aa34.26■■■■□ 3.07
FANCE-201ENST00000229769 ARHGAP35Q9NRY4 1499 aa34.23■■■■□ 3.07
FANCE-201ENST00000229769 CFTRP13569 1480 aa34.16■■■■□ 3.06
FANCE-201ENST00000229769 ITGAEP38570 1179 aa34.11■■■■□ 3.05
FANCE-201ENST00000229769 KCNH8Q96L42 1107 aa34.07■■■■□ 3.04
FANCE-201ENST00000229769 MAPKBP1O60336 1514 aa34.06■■■■□ 3.04
FANCE-201ENST00000229769 RAB3GAP2Q9H2M9 1393 aa34.03■■■■□ 3.04
FANCE-201ENST00000229769 ANP32EQ9BTT0 268 aa34■■■■□ 3.03
FANCE-201ENST00000229769 MAP3K1Q13233 1512 aa33.98■■■■□ 3.03
FANCE-201ENST00000229769 TIAM1Q13009 1591 aa33.96■■■■□ 3.03
FANCE-201ENST00000229769 IGF1RP08069 1367 aa33.95■■■■□ 3.03
FANCE-201ENST00000229769 SETD5Q9C0A6 1442 aa33.88■■■■□ 3.01
FANCE-201ENST00000229769 PRDM2Q13029 1718 aa33.88■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms