Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 DNPEP-209ENST00000457935 1091 ntTSL 512.72□□□□□ -0.379e-8■■□□□ 13.7
SRSF1Q07955 ZNF7-204ENST00000527218 545 ntTSL 412.65□□□□□ -0.389e-8■■□□□ 13.7
SRSF1Q07955 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.429e-8■■□□□ 13.7
SRSF1Q07955 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.469e-8■■□□□ 13.7
SRSF1Q07955 ZNF7-217ENST00000533314 516 ntTSL 411.93□□□□□ -0.59e-8■■□□□ 13.7
SRSF1Q07955 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.529e-8■■□□□ 13.7
SRSF1Q07955 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC11.78□□□□□ -0.529e-8■■□□□ 13.7
SRSF1Q07955 ZNF7-209ENST00000529819 513 ntTSL 4 BASIC11.5□□□□□ -0.579e-8■■□□□ 13.7
SRSF1Q07955 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.42□□□□□ -0.589e-8■■□□□ 13.7
SRSF1Q07955 DNPEP-210ENST00000460963 1610 ntTSL 211.37□□□□□ -0.599e-8■■□□□ 13.7
SRSF1Q07955 BRD9-213ENST00000495794 4865 ntTSL 211.33□□□□□ -0.62e-11■■□□□ 13.7
SRSF1Q07955 ZNF7-211ENST00000530682 581 ntTSL 411.23□□□□□ -0.619e-8■■□□□ 13.7
SRSF1Q07955 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.629e-8■■□□□ 13.7
SRSF1Q07955 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.669e-8■■□□□ 13.7
SRSF1Q07955 CDK5RAP2-212ENST00000480112 5826 ntTSL 1 (best)10.79□□□□□ -0.689e-8■■□□□ 13.7
SRSF1Q07955 FTSJ3-213ENST00000583901 867 ntTSL 210.75□□□□□ -0.699e-8■■□□□ 13.7
SRSF1Q07955 BRD9-203ENST00000475706 744 ntTSL 1 (best)10.74□□□□□ -0.692e-11■■□□□ 13.7
SRSF1Q07955 FTSJ3-212ENST00000583202 908 ntTSL 310.35□□□□□ -0.759e-8■■□□□ 13.7
SRSF1Q07955 HMGA2-209ENST00000539662 485 ntTSL 39.98□□□□□ -0.819e-8■■□□□ 13.7
SRSF1Q07955 DNPEP-215ENST00000519698 482 ntTSL 39.93□□□□□ -0.829e-8■■□□□ 13.7
SRSF1Q07955 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.849e-8■■□□□ 13.7
SRSF1Q07955 FTSJ3-204ENST00000579831 411 ntTSL 39.69□□□□□ -0.869e-8■■□□□ 13.7
SRSF1Q07955 ZNF7-215ENST00000532393 569 ntTSL 49.12□□□□□ -0.959e-8■■□□□ 13.7
SRSF1Q07955 BCL9L-204ENST00000530293 445 ntTSL 58.88□□□□□ -0.999e-8■■□□□ 13.7
SRSF1Q07955 SMC4-213ENST00000472282 667 ntTSL 38.72□□□□□ -1.019e-8■■□□□ 13.7
SRSF1Q07955 DNPEP-216ENST00000519905 576 ntTSL 48.56□□□□□ -1.049e-8■■□□□ 13.7
SRSF1Q07955 CDK5RAP2-208ENST00000472883 389 ntTSL 38.3□□□□□ -1.089e-8■■□□□ 13.7
SRSF1Q07955 WDFY2-202ENST00000460145 395 ntTSL 58.23□□□□□ -1.092e-11■■□□□ 13.7
SRSF1Q07955 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.19e-8■■□□□ 13.7
SRSF1Q07955 SMC4-214ENST00000472991 582 ntTSL 58.16□□□□□ -1.19e-8■■□□□ 13.7
SRSF1Q07955 CDK5RAP2-216ENST00000483412 6235 ntTSL 1 (best)7.99□□□□□ -1.139e-8■■□□□ 13.7
SRSF1Q07955 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC7.86□□□□□ -1.159e-8■■□□□ 13.7
SRSF1Q07955 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.152e-11■■□□□ 13.7
SRSF1Q07955 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.249e-8■■□□□ 13.7
SRSF1Q07955 CDK5RAP2-209ENST00000473282 5956 ntTSL 1 (best)7.12□□□□□ -1.279e-8■■□□□ 13.7
SRSF1Q07955 SMC4-217ENST00000485867 629 ntTSL 37.12□□□□□ -1.279e-8■■□□□ 13.7
SRSF1Q07955 BRD9-211ENST00000494422 449 ntTSL 35.62□□□□□ -1.512e-11■■□□□ 13.7
SRSF1Q07955 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.529e-8■■□□□ 13.7
SRSF1Q07955 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.639e-8■■□□□ 13.7
SRSF1Q07955 SMC4-208ENST00000467468 566 ntTSL 44.35□□□□□ -1.719e-8■■□□□ 13.7
SRSF1Q07955 SASH1-202ENST00000367469 591 ntTSL 33.06□□□□□ -1.929e-8■■□□□ 13.7
SRSF1Q07955 HECTD1-215ENST00000556474 1046 ntTSL 317.78■□□□□ 0.441e-6■■□□□ 13.7
SRSF1Q07955 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.631e-6■■□□□ 13.7
SRSF1Q07955 EIF2AK1-203ENST00000431744 806 ntTSL 324.32■■□□□ 1.481e-7■■□□□ 13.7
SRSF1Q07955 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.77■□□□□ 0.927e-9■■□□□ 13.7
SRSF1Q07955 VPS53-210ENST00000571456 744 ntTSL 320.17■□□□□ 0.827e-9■■□□□ 13.7
SRSF1Q07955 VPS53-218ENST00000575207 575 ntTSL 418.33■□□□□ 0.527e-9■■□□□ 13.7
SRSF1Q07955 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.23■□□□□ 0.357e-9■■□□□ 13.7
SRSF1Q07955 TXNRD1-220ENST00000529751 557 ntTSL 417.18■□□□□ 0.341e-7■■□□□ 13.7
SRSF1Q07955 EIF2AK1-206ENST00000463213 791 ntTSL 215.71■□□□□ 0.111e-7■■□□□ 13.7
SRSF1Q07955 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.17■□□□□ 0.027e-9■■□□□ 13.7
SRSF1Q07955 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.42□□□□□ -0.11e-7■■□□□ 13.7
SRSF1Q07955 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.111e-7■■□□□ 13.7
SRSF1Q07955 VPS53-215ENST00000573028 3204 ntTSL 213.06□□□□□ -0.327e-9■■□□□ 13.7
SRSF1Q07955 TXNRD1-221ENST00000529784 607 ntTSL 411.87□□□□□ -0.511e-7■■□□□ 13.7
SRSF1Q07955 TXNRD1-223ENST00000531691 728 ntTSL 211.66□□□□□ -0.541e-7■■□□□ 13.7
SRSF1Q07955 SND1-209ENST00000470723 568 ntTSL 411.29□□□□□ -0.61e-7■■□□□ 13.7
SRSF1Q07955 TXNRD1-216ENST00000527335 786 ntTSL 511.13□□□□□ -0.631e-7■■□□□ 13.7
SRSF1Q07955 SND1-213ENST00000486037 695 ntTSL 310.58□□□□□ -0.721e-7■■□□□ 13.7
SRSF1Q07955 TXNRD1-211ENST00000526266 577 ntTSL 410.52□□□□□ -0.731e-7■■□□□ 13.7
SRSF1Q07955 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC10.42□□□□□ -0.741e-7■■□□□ 13.7
SRSF1Q07955 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.751e-7■■□□□ 13.7
SRSF1Q07955 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC10.15□□□□□ -0.791e-7■■□□□ 13.7
SRSF1Q07955 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.841e-7■■□□□ 13.7
SRSF1Q07955 TXNRD1-213ENST00000526580 400 ntTSL 1 (best)9.62□□□□□ -0.871e-7■■□□□ 13.7
SRSF1Q07955 TXNRD1-222ENST00000531689 554 ntTSL 49.44□□□□□ -0.91e-7■■□□□ 13.7
SRSF1Q07955 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.931e-7■■□□□ 13.7
SRSF1Q07955 VPS53-202ENST00000389040 1903 ntTSL 1 (best)8.97□□□□□ -0.977e-9■■□□□ 13.7
SRSF1Q07955 TXNRD1-206ENST00000524698 1933 ntAPPRIS P2 TSL 2 BASIC8.95□□□□□ -0.981e-7■■□□□ 13.7
SRSF1Q07955 VPS53-203ENST00000401468 1269 ntTSL 1 (best) BASIC8.84□□□□□ -0.997e-9■■□□□ 13.7
SRSF1Q07955 TXNRD1-217ENST00000527688 3858 ntTSL 28.2□□□□□ -1.11e-7■■□□□ 13.7
SRSF1Q07955 TXNRD1-218ENST00000528079 629 ntTSL 47.57□□□□□ -1.21e-7■■□□□ 13.7
SRSF1Q07955 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC7.5□□□□□ -1.211e-7■■□□□ 13.7
SRSF1Q07955 SND1-211ENST00000484767 460 ntTSL 47.17□□□□□ -1.261e-7■■□□□ 13.7
SRSF1Q07955 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC6.86□□□□□ -1.311e-7■■□□□ 13.7
SRSF1Q07955 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC6.77□□□□□ -1.331e-7■■□□□ 13.7
SRSF1Q07955 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.36□□□□□ -1.391e-7■■□□□ 13.7
SRSF1Q07955 YTHDC1-205ENST00000507529 689 ntTSL 36.2□□□□□ -1.421e-7■■□□□ 13.7
SRSF1Q07955 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.427e-9■■□□□ 13.7
SRSF1Q07955 VPS53-219ENST00000576019 613 ntTSL 36.11□□□□□ -1.437e-9■■□□□ 13.7
SRSF1Q07955 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.521e-7■■□□□ 13.7
SRSF1Q07955 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.35□□□□□ -1.551e-7■■□□□ 13.7
SRSF1Q07955 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.18□□□□□ -1.581e-7■■□□□ 13.7
SRSF1Q07955 U2SURP-212ENST00000488587 866 ntTSL 34.76□□□□□ -1.651e-7■■□□□ 13.7
SRSF1Q07955 U2SURP-206ENST00000470400 881 ntTSL 34.73□□□□□ -1.651e-7■■□□□ 13.7
SRSF1Q07955 U2SURP-201ENST00000461591 1580 ntTSL 24.45□□□□□ -1.71e-7■■□□□ 13.7
SRSF1Q07955 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.74□□□□□ -0.532e-6■■□□□ 13.7
SRSF1Q07955 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.19□□□□□ -0.622e-6■■□□□ 13.7
SRSF1Q07955 RAB18-201ENST00000356940 4886 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.032e-6■■□□□ 13.7
SRSF1Q07955 RAB18-204ENST00000465772 985 ntTSL 28.63□□□□□ -1.032e-6■■□□□ 13.7
SRSF1Q07955 RAB18-202ENST00000375802 617 ntTSL 5 BASIC8.48□□□□□ -1.052e-6■■□□□ 13.7
SRSF1Q07955 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.18□□□□□ -1.742e-6■■□□□ 13.7
SRSF1Q07955 HDAC10-221ENST00000498366 2153 ntTSL 515.83■□□□□ 0.123e-6■■□□□ 13.7
SRSF1Q07955 MAPK12-209ENST00000497036 6248 ntTSL 215.39■□□□□ 0.053e-6■■□□□ 13.7
SRSF1Q07955 HDAC10-206ENST00000454936 1922 ntTSL 215.28■□□□□ 0.043e-6■■□□□ 13.7
SRSF1Q07955 HDAC10-204ENST00000429374 1634 ntTSL 1 (best)15.27■□□□□ 0.033e-6■■□□□ 13.7
SRSF1Q07955 HDAC10-214ENST00000483222 2091 ntTSL 514.41□□□□□ -0.13e-6■■□□□ 13.7
SRSF1Q07955 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.12□□□□□ -0.153e-6■■□□□ 13.7
SRSF1Q07955 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.11□□□□□ -0.153e-6■■□□□ 13.7
SRSF1Q07955 HDAC10-203ENST00000415993 2375 ntTSL 1 (best)13.8□□□□□ -0.23e-6■■□□□ 13.7
Retrieved 100 of 14,836 protein–RNA pairs in 167.3 ms