RNA–Protein interactions for RNA: ENST00000495794.5

BRD9-213, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 4,865 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-213ENST00000495794 DCAF8L2P0C7V8 631 aa24.31■■□□□ 1.48
BRD9-213ENST00000495794 NISCHQ9Y2I1 1504 aa24.28■■□□□ 1.48
BRD9-213ENST00000495794 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
BRD9-213ENST00000495794 SHROOM4Q9ULL8 1493 aa22.94■■□□□ 1.26
BRD9-213ENST00000495794 EHMT2Q96KQ7 1210 aa22.32■■□□□ 1.16
BRD9-213ENST00000495794 FAM9AQ8IZU1 332 aaPredicted RBP21.92■■□□□ 1.1
BRD9-213ENST00000495794 APLP2Q06481 763 aa21.85■■□□□ 1.09
BRD9-213ENST00000495794 PCGF6Q9BYE7 350 aa21.78■■□□□ 1.08
BRD9-213ENST00000495794 TRIM41Q8WV44 630 aa21.6■■□□□ 1.05
BRD9-213ENST00000495794 TTBK1Q5TCY1 1321 aaPredicted RBP21.58■■□□□ 1.04
BRD9-213ENST00000495794 PELP1Q8IZL8 1130 aaKnown RBP21.5■■□□□ 1.03
BRD9-213ENST00000495794 RANGAP1P46060 587 aaPredicted RBP21.34■■□□□ 1.01
BRD9-213ENST00000495794 ZEB1P37275 1124 aaPredicted RBP21.33■■□□□ 1
BRD9-213ENST00000495794 CCER1Q8TC90 406 aaPredicted RBP21.26■□□□□ 0.99
BRD9-213ENST00000495794 UBTFP17480 764 aaKnown RBP21.24■□□□□ 0.99
BRD9-213ENST00000495794 CENPBP07199 599 aaPredicted RBP21.1■□□□□ 0.97
BRD9-213ENST00000495794 ATP1B4Q9UN42 357 aaPredicted RBP21.07■□□□□ 0.96
BRD9-213ENST00000495794 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
BRD9-213ENST00000495794 PPARGC1BQ86YN6 1023 aaKnown RBP20.95■□□□□ 0.95
BRD9-213ENST00000495794 TRIM26Q12899 539 aaPredicted RBP20.93■□□□□ 0.94
BRD9-213ENST00000495794 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
BRD9-213ENST00000495794 HRCP23327 699 aa20.77■□□□□ 0.91
BRD9-213ENST00000495794 YTHDC1Q96MU7 727 aaKnown RBP20.67■□□□□ 0.9
BRD9-213ENST00000495794 NEFLP07196 543 aa20.54■□□□□ 0.88
BRD9-213ENST00000495794 ERICH6Q7L0X2 663 aa20.54■□□□□ 0.88
BRD9-213ENST00000495794 MYT1Q01538 1121 aa20.54■□□□□ 0.88
BRD9-213ENST00000495794 ITGAEP38570 1179 aa20.51■□□□□ 0.87
BRD9-213ENST00000495794 HNRNPUL2Q1KMD3 747 aaKnown RBP20.48■□□□□ 0.87
BRD9-213ENST00000495794 ABCC9O60706 1549 aa20.35■□□□□ 0.85
BRD9-213ENST00000495794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
BRD9-213ENST00000495794 PABPN1Q86U42 306 aaKnown RBP eCLIP20.27■□□□□ 0.83
BRD9-213ENST00000495794 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
BRD9-213ENST00000495794 POLR3GLQ9BT43 218 aa20.15■□□□□ 0.82
BRD9-213ENST00000495794 CCDC180Q9P1Z9 1646 aa20.14■□□□□ 0.82
BRD9-213ENST00000495794 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
BRD9-213ENST00000495794 MYT1LQ9UL68 1186 aa20.09■□□□□ 0.81
BRD9-213ENST00000495794 FAM50AQ14320 339 aaKnown RBP20.01■□□□□ 0.79
BRD9-213ENST00000495794 CNGB1Q14028 1251 aaPredicted RBP19.98■□□□□ 0.79
BRD9-213ENST00000495794 CSRNP3Q8WYN3 585 aa19.88■□□□□ 0.77
BRD9-213ENST00000495794 SCRIBQ14160 1630 aa19.84■□□□□ 0.77
BRD9-213ENST00000495794 TRIM52Q96A61 297 aa19.84■□□□□ 0.77
BRD9-213ENST00000495794 NEUROD1Q13562 356 aa19.84■□□□□ 0.77
BRD9-213ENST00000495794 DAXXQ9UER7 740 aaPredicted RBP19.77■□□□□ 0.76
BRD9-213ENST00000495794 ZNF316A6NFI3 1004 aaPredicted RBP19.7■□□□□ 0.74
BRD9-213ENST00000495794 SLC4A1APQ9BWU0 796 aaKnown RBP19.65■□□□□ 0.74
BRD9-213ENST00000495794 GTF3C3Q9Y5Q9 886 aa19.65■□□□□ 0.74
BRD9-213ENST00000495794 P3H3Q8IVL6 736 aa19.64■□□□□ 0.74
BRD9-213ENST00000495794 ANP32CO43423 234 aa19.61■□□□□ 0.73
BRD9-213ENST00000495794 FBLN2P98095 1184 aa19.6■□□□□ 0.73
BRD9-213ENST00000495794 ZNF326Q5BKZ1 582 aaKnown RBP19.58■□□□□ 0.72
BRD9-213ENST00000495794 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
BRD9-213ENST00000495794 BCANQ96GW7 911 aa19.51■□□□□ 0.71
BRD9-213ENST00000495794 ARID3CA6NKF2 412 aa19.48■□□□□ 0.71
BRD9-213ENST00000495794 CLSPNQ9HAW4 1339 aa19.47■□□□□ 0.71
BRD9-213ENST00000495794 ACIN1Q9UKV3 1341 aaKnown RBP19.44■□□□□ 0.7
BRD9-213ENST00000495794 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
BRD9-213ENST00000495794 RSF1Q96T23 1441 aaPredicted RBP19.39■□□□□ 0.69
BRD9-213ENST00000495794 RTL5Q5HYW3 569 aaPredicted RBP19.38■□□□□ 0.69
BRD9-213ENST00000495794 CDK11AQ9UQ88 783 aaPredicted RBP19.36■□□□□ 0.69
BRD9-213ENST00000495794 ZNF777Q9ULD5 760 aaPredicted RBP19.34■□□□□ 0.69
BRD9-213ENST00000495794 RB1CC1Q8TDY2 1594 aa19.3■□□□□ 0.68
BRD9-213ENST00000495794 NACADO15069 1562 aa19.29■□□□□ 0.68
BRD9-213ENST00000495794 TONSLQ96HA7 1378 aa19.25■□□□□ 0.67
BRD9-213ENST00000495794 DDX10Q13206 875 aaKnown RBP19.18■□□□□ 0.66
BRD9-213ENST00000495794 CLIP1P30622 1438 aa19.16■□□□□ 0.66
BRD9-213ENST00000495794 CHIC2Q9UKJ5 165 aa19.11■□□□□ 0.65
BRD9-213ENST00000495794 CANXP27824 592 aaKnown RBP19.08■□□□□ 0.65
BRD9-213ENST00000495794 EEA1Q15075 1411 aa19.08■□□□□ 0.64
BRD9-213ENST00000495794 HNRNPUQ00839 825 aaKnown RBP eCLIP19.07■□□□□ 0.64
BRD9-213ENST00000495794 FKBP8Q14318 412 aa19.06■□□□□ 0.64
BRD9-213ENST00000495794 ZBTB47Q9UFB7 747 aaPredicted RBP19.06■□□□□ 0.64
BRD9-213ENST00000495794 MTUS2Q5JR59 1369 aa19.05■□□□□ 0.64
BRD9-213ENST00000495794 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
BRD9-213ENST00000495794 NEFMP07197 916 aa19.03■□□□□ 0.64
BRD9-213ENST00000495794 CEP162Q5TB80 1403 aa19.03■□□□□ 0.64
BRD9-213ENST00000495794 FAM9BQ8IZU0 186 aa19■□□□□ 0.63
BRD9-213ENST00000495794 GOLGA3Q08378 1498 aa19■□□□□ 0.63
BRD9-213ENST00000495794 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.637e-9■■□□□ 11.4
BRD9-213ENST00000495794 MIER1Q8N108 512 aa18.98■□□□□ 0.63
BRD9-213ENST00000495794 BAZ1AQ9NRL2 1556 aaPredicted RBP18.98■□□□□ 0.63
BRD9-213ENST00000495794 TSPY4P0CV99 314 aa18.96■□□□□ 0.63
BRD9-213ENST00000495794 TSPY10P0CW01 314 aa18.96■□□□□ 0.63
BRD9-213ENST00000495794 ANP32AP39687 249 aaKnown RBP18.95■□□□□ 0.62
BRD9-213ENST00000495794 CHGAP10645 457 aaKnown RBP18.95■□□□□ 0.62
BRD9-213ENST00000495794 BCL11AQ9H165 835 aa18.92■□□□□ 0.62
BRD9-213ENST00000495794 TNIKQ9UKE5 1360 aa18.91■□□□□ 0.62
BRD9-213ENST00000495794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.91■□□□□ 0.626e-7■■■■□ 19.4
BRD9-213ENST00000495794 SLC24A1O60721 1099 aa18.9■□□□□ 0.62
BRD9-213ENST00000495794 TMC1Q8TDI8 760 aa18.9■□□□□ 0.62
BRD9-213ENST00000495794 HIRIP3Q9BW71 556 aaPredicted RBP18.9■□□□□ 0.62
BRD9-213ENST00000495794 CHMP7Q8WUX9 453 aaPredicted RBP18.89■□□□□ 0.62
BRD9-213ENST00000495794 NPM1P06748 294 aaKnown RBP eCLIP18.89■□□□□ 0.61
BRD9-213ENST00000495794 SALL2Q9Y467 1007 aaPredicted RBP18.87■□□□□ 0.61
BRD9-213ENST00000495794 MRS2Q9HD23 443 aa18.86■□□□□ 0.61
BRD9-213ENST00000495794 RRP7BPQ9NSQ0 103 aa18.86■□□□□ 0.61
BRD9-213ENST00000495794 BAZ1BQ9UIG0 1483 aaKnown RBP18.86■□□□□ 0.61
BRD9-213ENST00000495794 KDM2AQ9Y2K7 1162 aa18.86■□□□□ 0.61
BRD9-213ENST00000495794 NPM2Q86SE8 214 aaKnown RBP18.85■□□□□ 0.61
BRD9-213ENST00000495794 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
BRD9-213ENST00000495794 ESF1Q9H501 851 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms