RNA–Protein interactions for RNA: ENST00000527688.5

TXNRD1-217, Transcript of thioredoxin reductase 1, humanhuman

TSL 2

Gene TXNRD1, Length 3,858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TXNRD1-217ENST00000527688 NISCHQ9Y2I1 1504 aa20.1■□□□□ 0.81
TXNRD1-217ENST00000527688 DCAF8L2P0C7V8 631 aa18.19■□□□□ 0.5
TXNRD1-217ENST00000527688 SHROOM4Q9ULL8 1493 aa18.08■□□□□ 0.48
TXNRD1-217ENST00000527688 SUPT5HO00267 1087 aaKnown RBP17.97■□□□□ 0.47
TXNRD1-217ENST00000527688 PELP1Q8IZL8 1130 aaKnown RBP17.11■□□□□ 0.33
TXNRD1-217ENST00000527688 HRCP23327 699 aa16.94■□□□□ 0.3
TXNRD1-217ENST00000527688 CHIC1Q5VXU3 224 aa16.91■□□□□ 0.3
TXNRD1-217ENST00000527688 PCGF6Q9BYE7 350 aa16.88■□□□□ 0.29
TXNRD1-217ENST00000527688 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
TXNRD1-217ENST00000527688 EHMT2Q96KQ7 1210 aa16.85■□□□□ 0.29
TXNRD1-217ENST00000527688 FAM9AQ8IZU1 332 aaPredicted RBP16.75■□□□□ 0.27
TXNRD1-217ENST00000527688 CCDC180Q9P1Z9 1646 aa16.72■□□□□ 0.27
TXNRD1-217ENST00000527688 MYT1Q01538 1121 aa16.66■□□□□ 0.26
TXNRD1-217ENST00000527688 LOC105371045A0A1W2PR82 267 aa16.64■□□□□ 0.25
TXNRD1-217ENST00000527688 TRIM41Q8WV44 630 aa16.64■□□□□ 0.25
TXNRD1-217ENST00000527688 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
TXNRD1-217ENST00000527688 ABCC9O60706 1549 aa16.36■□□□□ 0.21
TXNRD1-217ENST00000527688 MYO15BQ96JP2 1530 aa16.36■□□□□ 0.21
TXNRD1-217ENST00000527688 TRIM26Q12899 539 aaPredicted RBP16.33■□□□□ 0.21
TXNRD1-217ENST00000527688 TTBK1Q5TCY1 1321 aaPredicted RBP16.28■□□□□ 0.2
TXNRD1-217ENST00000527688 ZEB1P37275 1124 aaPredicted RBP16.24■□□□□ 0.19
TXNRD1-217ENST00000527688 SCRIBQ14160 1630 aa16.23■□□□□ 0.19
TXNRD1-217ENST00000527688 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
TXNRD1-217ENST00000527688 UBTFP17480 764 aaKnown RBP16.07■□□□□ 0.16
TXNRD1-217ENST00000527688 CCER1Q8TC90 406 aaPredicted RBP16.05■□□□□ 0.16
TXNRD1-217ENST00000527688 CENPBP07199 599 aaPredicted RBP16.05■□□□□ 0.16
TXNRD1-217ENST00000527688 RSF1Q96T23 1441 aaPredicted RBP16.04■□□□□ 0.16
TXNRD1-217ENST00000527688 SCAF1Q9H7N4 1312 aaKnown RBP16.03■□□□□ 0.16
TXNRD1-217ENST00000527688 RANGAP1P46060 587 aaPredicted RBP15.99■□□□□ 0.15
TXNRD1-217ENST00000527688 APLP2Q06481 763 aa15.97■□□□□ 0.15
TXNRD1-217ENST00000527688 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
TXNRD1-217ENST00000527688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
TXNRD1-217ENST00000527688 CECR2Q9BXF3 1484 aa15.81■□□□□ 0.12
TXNRD1-217ENST00000527688 ACIN1Q9UKV3 1341 aaKnown RBP15.8■□□□□ 0.12
TXNRD1-217ENST00000527688 GTF3C3Q9Y5Q9 886 aa15.78■□□□□ 0.12
TXNRD1-217ENST00000527688 NACADO15069 1562 aa15.78■□□□□ 0.12
TXNRD1-217ENST00000527688 RB1CC1Q8TDY2 1594 aa15.75■□□□□ 0.11
TXNRD1-217ENST00000527688 HNRNPUL2Q1KMD3 747 aaKnown RBP15.66■□□□□ 0.1
TXNRD1-217ENST00000527688 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
TXNRD1-217ENST00000527688 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
TXNRD1-217ENST00000527688 NEUROD1Q13562 356 aa15.64■□□□□ 0.09
TXNRD1-217ENST00000527688 YTHDC1Q96MU7 727 aaKnown RBP15.57■□□□□ 0.08
TXNRD1-217ENST00000527688 DIEXFQ68CQ4 756 aaKnown RBP15.57■□□□□ 0.08
TXNRD1-217ENST00000527688 BAZ1AQ9NRL2 1556 aaPredicted RBP15.54■□□□□ 0.08
TXNRD1-217ENST00000527688 WIZO95785 1651 aa15.51■□□□□ 0.07
TXNRD1-217ENST00000527688 ATP1B4Q9UN42 357 aaPredicted RBP15.51■□□□□ 0.07
TXNRD1-217ENST00000527688 ITGAEP38570 1179 aa15.44■□□□□ 0.06
TXNRD1-217ENST00000527688 CEP162Q5TB80 1403 aa15.4■□□□□ 0.06
TXNRD1-217ENST00000527688 ABCC8Q09428 1581 aa15.38■□□□□ 0.05
TXNRD1-217ENST00000527688 CCDC88BA6NC98 1476 aa15.38■□□□□ 0.05
TXNRD1-217ENST00000527688 SOGA1O94964 1423 aa15.36■□□□□ 0.05
TXNRD1-217ENST00000527688 WRNQ14191 1432 aaPredicted RBP eCLIP15.33■□□□□ 0.04
TXNRD1-217ENST00000527688 EEA1Q15075 1411 aa15.31■□□□□ 0.04
TXNRD1-217ENST00000527688 TNIKQ9UKE5 1360 aa15.31■□□□□ 0.04
TXNRD1-217ENST00000527688 ZNF316A6NFI3 1004 aaPredicted RBP15.29■□□□□ 0.04
TXNRD1-217ENST00000527688 TOP2AP11388 1531 aaKnown RBP15.28■□□□□ 0.04
TXNRD1-217ENST00000527688 GOLGA3Q08378 1498 aa15.27■□□□□ 0.04
TXNRD1-217ENST00000527688 CLIP1P30622 1438 aa15.25■□□□□ 0.03
TXNRD1-217ENST00000527688 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
TXNRD1-217ENST00000527688 SMARCA4P51532 1647 aa15.22■□□□□ 0.03
TXNRD1-217ENST00000527688 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
TXNRD1-217ENST00000527688 BCL11AQ9H165 835 aa15.16■□□□□ 0.02
TXNRD1-217ENST00000527688 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
TXNRD1-217ENST00000527688 FAM50AQ14320 339 aaKnown RBP15.15■□□□□ 0.02
TXNRD1-217ENST00000527688 P3H3Q8IVL6 736 aa15.13■□□□□ 0.01
TXNRD1-217ENST00000527688 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
TXNRD1-217ENST00000527688 ERICH6Q7L0X2 663 aa15.09■□□□□ 0.01
TXNRD1-217ENST00000527688 ANP32EQ9BTT0 268 aa15.08■□□□□ 0.01
TXNRD1-217ENST00000527688 ATAD2BQ9ULI0 1458 aa15.02■□□□□ -0
TXNRD1-217ENST00000527688 CLSPNQ9HAW4 1339 aa15.01□□□□□ -0.01
TXNRD1-217ENST00000527688 MIER1Q8N108 512 aa15□□□□□ -0.01
TXNRD1-217ENST00000527688 VPS8Q8N3P4 1428 aa14.99□□□□□ -0.01
TXNRD1-217ENST00000527688 KIF27Q86VH2 1401 aa14.97□□□□□ -0.01
TXNRD1-217ENST00000527688 NEFLP07196 543 aa14.96□□□□□ -0.01
TXNRD1-217ENST00000527688 RAPGEF2Q9Y4G8 1499 aa14.94□□□□□ -0.02
TXNRD1-217ENST00000527688 KANK4Q5T7N3 995 aaPredicted RBP14.9□□□□□ -0.02
TXNRD1-217ENST00000527688 BCANQ96GW7 911 aa14.85□□□□□ -0.03
TXNRD1-217ENST00000527688 SYNJ1O43426 1573 aa14.83□□□□□ -0.04
TXNRD1-217ENST00000527688 ARID3CA6NKF2 412 aa14.82□□□□□ -0.04
TXNRD1-217ENST00000527688 CUX2O14529 1486 aa14.82□□□□□ -0.04
TXNRD1-217ENST00000527688 TRIM52Q96A61 297 aa14.81□□□□□ -0.04
TXNRD1-217ENST00000527688 SUPT16HQ9Y5B9 1047 aaKnown RBP14.81□□□□□ -0.04
TXNRD1-217ENST00000527688 BICRAQ9NZM4 1560 aa14.79□□□□□ -0.04
TXNRD1-217ENST00000527688 CCNB3Q8WWL7 1395 aa14.78□□□□□ -0.04
TXNRD1-217ENST00000527688 CARMIL1Q5VZK9 1371 aa14.77□□□□□ -0.04
TXNRD1-217ENST00000527688 DDX10Q13206 875 aaKnown RBP14.77□□□□□ -0.05
TXNRD1-217ENST00000527688 UNC13AQ9UPW8 1703 aa14.76□□□□□ -0.05
TXNRD1-217ENST00000527688 TSHZ2Q9NRE2 1034 aa14.75□□□□□ -0.05
TXNRD1-217ENST00000527688 EIF4G1Q04637 1599 aaKnown RBP14.75□□□□□ -0.05
TXNRD1-217ENST00000527688 ANP32CO43423 234 aa14.73□□□□□ -0.05
TXNRD1-217ENST00000527688 CNGB1Q14028 1251 aaPredicted RBP14.73□□□□□ -0.05
TXNRD1-217ENST00000527688 HIRIP3Q9BW71 556 aaPredicted RBP14.73□□□□□ -0.05
TXNRD1-217ENST00000527688 POLR3GLQ9BT43 218 aa14.72□□□□□ -0.05
TXNRD1-217ENST00000527688 KIF21BO75037 1637 aa14.71□□□□□ -0.05
TXNRD1-217ENST00000527688 MTUS2Q5JR59 1369 aa14.71□□□□□ -0.05
TXNRD1-217ENST00000527688 SIN3AQ96ST3 1273 aa14.69□□□□□ -0.06
TXNRD1-217ENST00000527688 TONSLQ96HA7 1378 aa14.68□□□□□ -0.06
TXNRD1-217ENST00000527688 CHIC2Q9UKJ5 165 aa14.67□□□□□ -0.06
TXNRD1-217ENST00000527688 CADPSQ9ULU8 1353 aa14.67□□□□□ -0.06
TXNRD1-217ENST00000527688 FKBP8Q14318 412 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms