RNA–Protein interactions for RNA: ENST00000360822.7

CDK5RAP2-203, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDK5RAP2, Length 5,551 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-203ENST00000360822 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
CDK5RAP2-203ENST00000360822 NISCHQ9Y2I1 1504 aa16.29■□□□□ 0.2
CDK5RAP2-203ENST00000360822 PELP1Q8IZL8 1130 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP2-203ENST00000360822 MYT1Q01538 1121 aa15.58■□□□□ 0.08
CDK5RAP2-203ENST00000360822 SUPT5HO00267 1087 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP2-203ENST00000360822 ZEB1P37275 1124 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP2-203ENST00000360822 SHROOM4Q9ULL8 1493 aa15.21■□□□□ 0.02
CDK5RAP2-203ENST00000360822 CENPBP07199 599 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP2-203ENST00000360822 CCER1Q8TC90 406 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP2-203ENST00000360822 APLP2Q06481 763 aa14.88□□□□□ -0.03
CDK5RAP2-203ENST00000360822 ERICH6Q7L0X2 663 aa14.82□□□□□ -0.04
CDK5RAP2-203ENST00000360822 PCGF6Q9BYE7 350 aa14.73□□□□□ -0.05
CDK5RAP2-203ENST00000360822 FAM9AQ8IZU1 332 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP2-203ENST00000360822 EHMT2Q96KQ7 1210 aa14.63□□□□□ -0.07
CDK5RAP2-203ENST00000360822 NEFLP07196 543 aa14.56□□□□□ -0.08
CDK5RAP2-203ENST00000360822 HRCP23327 699 aa14.5□□□□□ -0.09
CDK5RAP2-203ENST00000360822 TRIM26Q12899 539 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP2-203ENST00000360822 ABCC9O60706 1549 aa14.45□□□□□ -0.1
CDK5RAP2-203ENST00000360822 YTHDC1Q96MU7 727 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP2-203ENST00000360822 TRIM41Q8WV44 630 aa14.37□□□□□ -0.11
CDK5RAP2-203ENST00000360822 RANGAP1P46060 587 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP2-203ENST00000360822 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.132e-6■□□□□ 9.6
CDK5RAP2-203ENST00000360822 TTBK1Q5TCY1 1321 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP2-203ENST00000360822 ATP1B4Q9UN42 357 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP2-203ENST00000360822 DAXXQ9UER7 740 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP2-203ENST00000360822 UBTFP17480 764 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP2-203ENST00000360822 CLSPNQ9HAW4 1339 aa14.02□□□□□ -0.17
CDK5RAP2-203ENST00000360822 RTL5Q5HYW3 569 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP2-203ENST00000360822 CHIC1Q5VXU3 224 aa13.93□□□□□ -0.18
CDK5RAP2-203ENST00000360822 DIEXFQ68CQ4 756 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP2-203ENST00000360822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP2-203ENST00000360822 HNRNPUL2Q1KMD3 747 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP2-203ENST00000360822 MYT1LQ9UL68 1186 aa13.84□□□□□ -0.19
CDK5RAP2-203ENST00000360822 ZNF316A6NFI3 1004 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP2-203ENST00000360822 ACIN1Q9UKV3 1341 aaKnown RBP13.71□□□□□ -0.22
CDK5RAP2-203ENST00000360822 CDK11AQ9UQ88 783 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP2-203ENST00000360822 GTF3C3Q9Y5Q9 886 aa13.69□□□□□ -0.22
CDK5RAP2-203ENST00000360822 DCAF1Q9Y4B6 1507 aa13.67□□□□□ -0.22
CDK5RAP2-203ENST00000360822 FBLN2P98095 1184 aa13.66□□□□□ -0.22
CDK5RAP2-203ENST00000360822 PPARGC1BQ86YN6 1023 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP2-203ENST00000360822 CCDC180Q9P1Z9 1646 aa13.62□□□□□ -0.23
CDK5RAP2-203ENST00000360822 LOC105371045A0A1W2PR82 267 aa13.61□□□□□ -0.23
CDK5RAP2-203ENST00000360822 SCRIBQ14160 1630 aa13.6□□□□□ -0.23
CDK5RAP2-203ENST00000360822 ANP32CO43423 234 aa13.58□□□□□ -0.24
CDK5RAP2-203ENST00000360822 RB1CC1Q8TDY2 1594 aa13.52□□□□□ -0.25
CDK5RAP2-203ENST00000360822 ANP32AP39687 249 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP2-203ENST00000360822 GLIPR1L2Q4G1C9 344 aa13.49□□□□□ -0.25
CDK5RAP2-203ENST00000360822 ITGAEP38570 1179 aa13.46□□□□□ -0.25
CDK5RAP2-203ENST00000360822 ZCCHC6Q5VYS8 1495 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP2-203ENST00000360822 POLR3GLQ9BT43 218 aa13.39□□□□□ -0.27
CDK5RAP2-203ENST00000360822 NACADO15069 1562 aa13.32□□□□□ -0.28
CDK5RAP2-203ENST00000360822 ANP32BQ92688 251 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP2-203ENST00000360822 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP2-203ENST00000360822 FAM50AQ14320 339 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP2-203ENST00000360822 BCANQ96GW7 911 aa13.28□□□□□ -0.28
CDK5RAP2-203ENST00000360822 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDK5RAP2-203ENST00000360822 TRIM52Q96A61 297 aa13.23□□□□□ -0.29
CDK5RAP2-203ENST00000360822 ARID3CA6NKF2 412 aa13.21□□□□□ -0.3
CDK5RAP2-203ENST00000360822 NEUROD1Q13562 356 aa13.2□□□□□ -0.3
CDK5RAP2-203ENST00000360822 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
CDK5RAP2-203ENST00000360822 ANP32EQ9BTT0 268 aa13.18□□□□□ -0.3
CDK5RAP2-203ENST00000360822 UPF2Q9HAU5 1272 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP2-203ENST00000360822 FKBP8Q14318 412 aa13.17□□□□□ -0.3
CDK5RAP2-203ENST00000360822 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
CDK5RAP2-203ENST00000360822 CHMP7Q8WUX9 453 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP2-203ENST00000360822 CANXP27824 592 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP2-203ENST00000360822 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP2-203ENST00000360822 DDRGK1Q96HY6 314 aa13.14□□□□□ -0.31
CDK5RAP2-203ENST00000360822 SLC4A1APQ9BWU0 796 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP2-203ENST00000360822 ESF1Q9H501 851 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP2-203ENST00000360822 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
CDK5RAP2-203ENST00000360822 TONSLQ96HA7 1378 aa13.11□□□□□ -0.31
CDK5RAP2-203ENST00000360822 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP2-203ENST00000360822 NEFMP07197 916 aa13.1□□□□□ -0.31
CDK5RAP2-203ENST00000360822 EEA1Q15075 1411 aa13.1□□□□□ -0.31
CDK5RAP2-203ENST00000360822 ZNF777Q9ULD5 760 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP2-203ENST00000360822 BAZ1BQ9UIG0 1483 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP2-203ENST00000360822 EIF5BO60841 1220 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP2-203ENST00000360822 CNGB1Q14028 1251 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP2-203ENST00000360822 HNRNPUQ00839 825 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDK5RAP2-203ENST00000360822 CCDC136Q96JN2 1154 aa13.01□□□□□ -0.33
CDK5RAP2-203ENST00000360822 PLPPR3Q6T4P5 718 aa13□□□□□ -0.33
CDK5RAP2-203ENST00000360822 PPM1GO15355 546 aaPredicted RBP13□□□□□ -0.33
CDK5RAP2-203ENST00000360822 NPM2Q86SE8 214 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP2-203ENST00000360822 BECN1Q14457 450 aa12.98□□□□□ -0.33
CDK5RAP2-203ENST00000360822 HSP90AA1P07900 732 aaKnown RBP12.96□□□□□ -0.34
CDK5RAP2-203ENST00000360822 ERICH6BQ5W0A0 696 aa12.94□□□□□ -0.34
CDK5RAP2-203ENST00000360822 TNNT2P45379 298 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP2-203ENST00000360822 STAG3Q9UJ98 1225 aa12.92□□□□□ -0.34
CDK5RAP2-203ENST00000360822 ZNF326Q5BKZ1 582 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP2-203ENST00000360822 GOLGA3Q08378 1498 aa12.9□□□□□ -0.34
CDK5RAP2-203ENST00000360822 MIER1Q8N108 512 aa12.88□□□□□ -0.35
CDK5RAP2-203ENST00000360822 DDX10Q13206 875 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP2-203ENST00000360822 BAZ1AQ9NRL2 1556 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP2-203ENST00000360822 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP2-203ENST00000360822 TMC1Q8TDI8 760 aa12.86□□□□□ -0.35
CDK5RAP2-203ENST00000360822 GOLGA6L22H0YM25 854 aa12.86□□□□□ -0.35
CDK5RAP2-203ENST00000360822 NBR1Q14596 966 aa12.86□□□□□ -0.35
CDK5RAP2-203ENST00000360822 TRIM44Q96DX7 344 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP2-203ENST00000360822 PPP4R2Q9NY27 417 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms