RNA–Protein interactions for RNA: ENST00000472883.1

CDK5RAP2-208, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 3

Gene CDK5RAP2, Length 389 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-208ENST00000472883 NISCHQ9Y2I1 1504 aa19.22■□□□□ 0.67
CDK5RAP2-208ENST00000472883 ABCC9O60706 1549 aa18.34■□□□□ 0.53
CDK5RAP2-208ENST00000472883 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
CDK5RAP2-208ENST00000472883 CCDC180Q9P1Z9 1646 aa17.76■□□□□ 0.43
CDK5RAP2-208ENST00000472883 RB1CC1Q8TDY2 1594 aa17.23■□□□□ 0.35
CDK5RAP2-208ENST00000472883 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
CDK5RAP2-208ENST00000472883 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
CDK5RAP2-208ENST00000472883 NACADO15069 1562 aa16.92■□□□□ 0.3
CDK5RAP2-208ENST00000472883 PABPN1Q86U42 306 aaKnown RBP eCLIP16.87■□□□□ 0.29
CDK5RAP2-208ENST00000472883 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
CDK5RAP2-208ENST00000472883 CECR2Q9BXF3 1484 aa16.66■□□□□ 0.26
CDK5RAP2-208ENST00000472883 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
CDK5RAP2-208ENST00000472883 SHROOM4Q9ULL8 1493 aa16.51■□□□□ 0.23
CDK5RAP2-208ENST00000472883 MYO15BQ96JP2 1530 aa16.45■□□□□ 0.22
CDK5RAP2-208ENST00000472883 DCAF8L2P0C7V8 631 aa16.42■□□□□ 0.22
CDK5RAP2-208ENST00000472883 EIF4G1Q04637 1599 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP2-208ENST00000472883 CUX2O14529 1486 aa16.27■□□□□ 0.19
CDK5RAP2-208ENST00000472883 SCRIBQ14160 1630 aa15.96■□□□□ 0.15
CDK5RAP2-208ENST00000472883 TRIM41Q8WV44 630 aa15.94■□□□□ 0.14
CDK5RAP2-208ENST00000472883 ERCC6Q03468 1493 aa15.94■□□□□ 0.14
CDK5RAP2-208ENST00000472883 DCAF1Q9Y4B6 1507 aa15.91■□□□□ 0.14
CDK5RAP2-208ENST00000472883 ZCCHC6Q5VYS8 1495 aaKnown RBP15.76■□□□□ 0.11
CDK5RAP2-208ENST00000472883 THOC2Q8NI27 1593 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP2-208ENST00000472883 NCAPD3P42695 1498 aa15.58■□□□□ 0.08
CDK5RAP2-208ENST00000472883 NESP48681 1621 aa15.52■□□□□ 0.08
CDK5RAP2-208ENST00000472883 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
CDK5RAP2-208ENST00000472883 KIF21AQ7Z4S6 1674 aa15.43■□□□□ 0.06
CDK5RAP2-208ENST00000472883 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
CDK5RAP2-208ENST00000472883 BAZ1AQ9NRL2 1556 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP2-208ENST00000472883 SMARCA2P51531 1590 aa15.4■□□□□ 0.06
CDK5RAP2-208ENST00000472883 ATAD2BQ9ULI0 1458 aa15.38■□□□□ 0.05
CDK5RAP2-208ENST00000472883 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
CDK5RAP2-208ENST00000472883 PDS5BQ9NTI5 1447 aa15.3■□□□□ 0.04
CDK5RAP2-208ENST00000472883 AEBP2Q6ZN18 517 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP2-208ENST00000472883 RIMBP3CA6NJZ7 1639 aa15.26■□□□□ 0.03
CDK5RAP2-208ENST00000472883 RIMBP3BA6NNM3 1639 aa15.26■□□□□ 0.03
CDK5RAP2-208ENST00000472883 RIMBP3Q9UFD9 1639 aa15.26■□□□□ 0.03
CDK5RAP2-208ENST00000472883 WDR62O43379 1518 aa15.22■□□□□ 0.03
CDK5RAP2-208ENST00000472883 SMARCA4P51532 1647 aa15.21■□□□□ 0.02
CDK5RAP2-208ENST00000472883 MRC2Q9UBG0 1479 aa15.2■□□□□ 0.02
CDK5RAP2-208ENST00000472883 BAZ1BQ9UIG0 1483 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP2-208ENST00000472883 PEG3Q9GZU2 1588 aa15.11■□□□□ 0.01
CDK5RAP2-208ENST00000472883 ARHGEF11O15085 1522 aa15.1■□□□□ 0.01
CDK5RAP2-208ENST00000472883 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
CDK5RAP2-208ENST00000472883 CADPSQ9ULU8 1353 aa15.02■□□□□ -0
CDK5RAP2-208ENST00000472883 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
CDK5RAP2-208ENST00000472883 CYB5RLQ6IPT4 315 aa14.95□□□□□ -0.02
CDK5RAP2-208ENST00000472883 ARAP1Q96P48 1450 aa14.87□□□□□ -0.03
CDK5RAP2-208ENST00000472883 FANCD2Q9BXW9 1451 aa14.86□□□□□ -0.03
CDK5RAP2-208ENST00000472883 URB2Q14146 1524 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP2-208ENST00000472883 CHD1O14646 1710 aa14.78□□□□□ -0.04
CDK5RAP2-208ENST00000472883 RSF1Q96T23 1441 aaPredicted RBP14.77□□□□□ -0.04
CDK5RAP2-208ENST00000472883 MROH2BQ7Z745 1585 aa14.76□□□□□ -0.05
CDK5RAP2-208ENST00000472883 ILDR1Q86SU0 546 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP2-208ENST00000472883 IFT140Q96RY7 1462 aa14.71□□□□□ -0.05
CDK5RAP2-208ENST00000472883 ZNF608Q9ULD9 1512 aaPredicted RBP14.71□□□□□ -0.06
CDK5RAP2-208ENST00000472883 CFTRP13569 1480 aa14.7□□□□□ -0.06
CDK5RAP2-208ENST00000472883 PRDM2Q13029 1718 aa14.7□□□□□ -0.06
CDK5RAP2-208ENST00000472883 EIF4G3O43432 1585 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP2-208ENST00000472883 WIZO95785 1651 aa14.58□□□□□ -0.08
CDK5RAP2-208ENST00000472883 CLASP1Q7Z460 1538 aa14.52□□□□□ -0.08
CDK5RAP2-208ENST00000472883 TOPBP1Q92547 1522 aa14.5□□□□□ -0.09
CDK5RAP2-208ENST00000472883 ABCC8Q09428 1581 aa14.49□□□□□ -0.09
CDK5RAP2-208ENST00000472883 FBLN2P98095 1184 aa14.49□□□□□ -0.09
CDK5RAP2-208ENST00000472883 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP2-208ENST00000472883 SYNJ1O43426 1573 aa14.47□□□□□ -0.09
CDK5RAP2-208ENST00000472883 AQRO60306 1485 aaKnown RBP eCLIP14.46□□□□□ -0.092e-8■■■■■ 34.5
CDK5RAP2-208ENST00000472883 KIF13AQ9H1H9 1805 aa14.45□□□□□ -0.1
CDK5RAP2-208ENST00000472883 DNMBPQ6XZF7 1577 aa14.41□□□□□ -0.1
CDK5RAP2-208ENST00000472883 GAPVD1Q14C86 1478 aa14.4□□□□□ -0.1
CDK5RAP2-208ENST00000472883 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
CDK5RAP2-208ENST00000472883 TOP2AP11388 1531 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP2-208ENST00000472883 KDM4FA0A1W2PPD8 638 aa14.32□□□□□ -0.12
CDK5RAP2-208ENST00000472883 SNAPC4Q5SXM2 1469 aa14.31□□□□□ -0.12
CDK5RAP2-208ENST00000472883 MAGI1Q96QZ7 1491 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP2-208ENST00000472883 CHMP7Q8WUX9 453 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP2-208ENST00000472883 POLA1P09884 1462 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP2-208ENST00000472883 ERCC6L2Q5T890 1561 aa14.29□□□□□ -0.12
CDK5RAP2-208ENST00000472883 SYNJ2O15056 1496 aa14.25□□□□□ -0.13
CDK5RAP2-208ENST00000472883 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP2-208ENST00000472883 KDM6BO15054 1643 aa14.2□□□□□ -0.14
CDK5RAP2-208ENST00000472883 GRIN2BQ13224 1484 aa14.19□□□□□ -0.14
CDK5RAP2-208ENST00000472883 RAD54L2Q9Y4B4 1467 aa14.19□□□□□ -0.14
CDK5RAP2-208ENST00000472883 SOGA1O94964 1423 aa14.18□□□□□ -0.14
CDK5RAP2-208ENST00000472883 PBRM1Q86U86 1689 aa14.18□□□□□ -0.14
CDK5RAP2-208ENST00000472883 HECW2Q9P2P5 1572 aa14.17□□□□□ -0.14
CDK5RAP2-208ENST00000472883 FBXO41Q8TF61 875 aa14.15□□□□□ -0.14
CDK5RAP2-208ENST00000472883 CCDC88BA6NC98 1476 aa14.13□□□□□ -0.15
CDK5RAP2-208ENST00000472883 ABCC10Q5T3U5 1492 aa14.13□□□□□ -0.15
CDK5RAP2-208ENST00000472883 CEP170Q5SW79 1584 aa14.12□□□□□ -0.15
CDK5RAP2-208ENST00000472883 TSPOAP1O95153 1857 aa14.12□□□□□ -0.15
CDK5RAP2-208ENST00000472883 DIP2BQ9P265 1576 aa14.1□□□□□ -0.15
CDK5RAP2-208ENST00000472883 SHROOM2Q13796 1616 aa14.1□□□□□ -0.15
CDK5RAP2-208ENST00000472883 FAM69CQ0P6D2 419 aa14.08□□□□□ -0.16
CDK5RAP2-208ENST00000472883 MAPKBP1O60336 1514 aa14.08□□□□□ -0.16
CDK5RAP2-208ENST00000472883 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
CDK5RAP2-208ENST00000472883 ADGRL1O94910 1474 aa14.06□□□□□ -0.16
CDK5RAP2-208ENST00000472883 LMTK3Q96Q04 1460 aa14.03□□□□□ -0.16
CDK5RAP2-208ENST00000472883 GRIN2AQ12879 1464 aa14.01□□□□□ -0.17
CDK5RAP2-208ENST00000472883 NUP160Q12769 1436 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms