RNA–Protein interactions for RNA: ENST00000531691.5

TXNRD1-223, Transcript of thioredoxin reductase 1, humanhuman

TSL 2

Gene TXNRD1, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TXNRD1-223ENST00000531691 NISCHQ9Y2I1 1504 aa28.41■■■□□ 2.14
TXNRD1-223ENST00000531691 ABCC9O60706 1549 aa26.19■■□□□ 1.78
TXNRD1-223ENST00000531691 CCDC180Q9P1Z9 1646 aa25.63■■□□□ 1.69
TXNRD1-223ENST00000531691 DNAJC5BQ9UF47 199 aa25.01■■□□□ 1.59
TXNRD1-223ENST00000531691 RB1CC1Q8TDY2 1594 aa24.72■■□□□ 1.55
TXNRD1-223ENST00000531691 NACADO15069 1562 aa24.44■■□□□ 1.5
TXNRD1-223ENST00000531691 PABPN1Q86U42 306 aaKnown RBP eCLIP24.37■■□□□ 1.49
TXNRD1-223ENST00000531691 DCAF8L2P0C7V8 631 aa24.36■■□□□ 1.49
TXNRD1-223ENST00000531691 UNC13AQ9UPW8 1703 aa23.96■■□□□ 1.43
TXNRD1-223ENST00000531691 MYO15BQ96JP2 1530 aa23.94■■□□□ 1.42
TXNRD1-223ENST00000531691 BICRAQ9NZM4 1560 aa23.92■■□□□ 1.42
TXNRD1-223ENST00000531691 CECR2Q9BXF3 1484 aa23.68■■□□□ 1.38
TXNRD1-223ENST00000531691 SHROOM4Q9ULL8 1493 aa23.67■■□□□ 1.38
TXNRD1-223ENST00000531691 CC2D2AQ9P2K1 1620 aa23.59■■□□□ 1.37
TXNRD1-223ENST00000531691 DCAF1Q9Y4B6 1507 aa23.44■■□□□ 1.34
TXNRD1-223ENST00000531691 EIF4G1Q04637 1599 aaKnown RBP23.43■■□□□ 1.34
TXNRD1-223ENST00000531691 DNAJC5Q9H3Z4 198 aa23.42■■□□□ 1.34
TXNRD1-223ENST00000531691 ZCCHC6Q5VYS8 1495 aaKnown RBP23.41■■□□□ 1.34
TXNRD1-223ENST00000531691 SCRIBQ14160 1630 aa23.35■■□□□ 1.33
TXNRD1-223ENST00000531691 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
TXNRD1-223ENST00000531691 CUX2O14529 1486 aa22.8■■□□□ 1.24
TXNRD1-223ENST00000531691 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
TXNRD1-223ENST00000531691 NCAPD3P42695 1498 aa22.59■■□□□ 1.21
TXNRD1-223ENST00000531691 ATAD2BQ9ULI0 1458 aa22.43■■□□□ 1.18
TXNRD1-223ENST00000531691 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
TXNRD1-223ENST00000531691 HMGXB3Q12766 1538 aa22.32■■□□□ 1.16
TXNRD1-223ENST00000531691 NESP48681 1621 aa22.32■■□□□ 1.16
TXNRD1-223ENST00000531691 SMARCA4P51532 1647 aa22.22■■□□□ 1.15
TXNRD1-223ENST00000531691 TRIM41Q8WV44 630 aa22.2■■□□□ 1.14
TXNRD1-223ENST00000531691 BAZ1BQ9UIG0 1483 aaKnown RBP22.2■■□□□ 1.14
TXNRD1-223ENST00000531691 THOC2Q8NI27 1593 aaKnown RBP22.14■■□□□ 1.13
TXNRD1-223ENST00000531691 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
TXNRD1-223ENST00000531691 PDS5BQ9NTI5 1447 aa22.11■■□□□ 1.13
TXNRD1-223ENST00000531691 BAZ1AQ9NRL2 1556 aaPredicted RBP22.1■■□□□ 1.13
TXNRD1-223ENST00000531691 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
TXNRD1-223ENST00000531691 PEG3Q9GZU2 1588 aa22.01■■□□□ 1.11
TXNRD1-223ENST00000531691 KIF21AQ7Z4S6 1674 aa21.94■■□□□ 1.1
TXNRD1-223ENST00000531691 CADPSQ9ULU8 1353 aa21.91■■□□□ 1.1
TXNRD1-223ENST00000531691 MRC2Q9UBG0 1479 aa21.87■■□□□ 1.09
TXNRD1-223ENST00000531691 MROH2BQ7Z745 1585 aa21.85■■□□□ 1.09
TXNRD1-223ENST00000531691 OSCARQ8IYS5 282 aa21.79■■□□□ 1.08
TXNRD1-223ENST00000531691 WDR62O43379 1518 aa21.79■■□□□ 1.08
TXNRD1-223ENST00000531691 CEP164Q9UPV0 1460 aa21.7■■□□□ 1.06
TXNRD1-223ENST00000531691 FANCD2Q9BXW9 1451 aa21.63■■□□□ 1.05
TXNRD1-223ENST00000531691 WIZO95785 1651 aa21.53■■□□□ 1.04
TXNRD1-223ENST00000531691 CFTRP13569 1480 aa21.52■■□□□ 1.03
TXNRD1-223ENST00000531691 URB2Q14146 1524 aaKnown RBP21.43■■□□□ 1.02
TXNRD1-223ENST00000531691 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
TXNRD1-223ENST00000531691 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
TXNRD1-223ENST00000531691 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
TXNRD1-223ENST00000531691 ARHGEF11O15085 1522 aa21.3■■□□□ 1
TXNRD1-223ENST00000531691 IFT140Q96RY7 1462 aa21.3■■□□□ 1
TXNRD1-223ENST00000531691 CYB5RLQ6IPT4 315 aa21.29■■□□□ 1
TXNRD1-223ENST00000531691 RSF1Q96T23 1441 aaPredicted RBP21.28■■□□□ 1
TXNRD1-223ENST00000531691 TOP2AP11388 1531 aaKnown RBP21.27■■□□□ 1
TXNRD1-223ENST00000531691 ZNF608Q9ULD9 1512 aaPredicted RBP21.25■□□□□ 0.99
TXNRD1-223ENST00000531691 TRHP20396 242 aaPredicted RBP21.25■□□□□ 0.99
TXNRD1-223ENST00000531691 ABCC8Q09428 1581 aa21.14■□□□□ 0.97
TXNRD1-223ENST00000531691 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
TXNRD1-223ENST00000531691 FBLN2P98095 1184 aa21.11■□□□□ 0.97
TXNRD1-223ENST00000531691 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
TXNRD1-223ENST00000531691 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
TXNRD1-223ENST00000531691 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
TXNRD1-223ENST00000531691 ARAP1Q96P48 1450 aa21.05■□□□□ 0.96
TXNRD1-223ENST00000531691 AQRO60306 1485 aaKnown RBP eCLIP21.04■□□□□ 0.965e-7■■■■■ 27
TXNRD1-223ENST00000531691 DNMBPQ6XZF7 1577 aa21■□□□□ 0.95
TXNRD1-223ENST00000531691 CHD1O14646 1710 aa20.96■□□□□ 0.95
TXNRD1-223ENST00000531691 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
TXNRD1-223ENST00000531691 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
TXNRD1-223ENST00000531691 CHMP7Q8WUX9 453 aaPredicted RBP20.88■□□□□ 0.93
TXNRD1-223ENST00000531691 TDRD9Q8NDG6 1382 aaKnown RBP20.86■□□□□ 0.93
TXNRD1-223ENST00000531691 SOGA1O94964 1423 aa20.85■□□□□ 0.93
TXNRD1-223ENST00000531691 RAD54L2Q9Y4B4 1467 aa20.82■□□□□ 0.92
TXNRD1-223ENST00000531691 SNAPC4Q5SXM2 1469 aa20.79■□□□□ 0.92
TXNRD1-223ENST00000531691 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
TXNRD1-223ENST00000531691 CLASP1Q7Z460 1538 aa20.77■□□□□ 0.92
TXNRD1-223ENST00000531691 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
TXNRD1-223ENST00000531691 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
TXNRD1-223ENST00000531691 GRIN2BQ13224 1484 aa20.71■□□□□ 0.91
TXNRD1-223ENST00000531691 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
TXNRD1-223ENST00000531691 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
TXNRD1-223ENST00000531691 GAPVD1Q14C86 1478 aa20.66■□□□□ 0.9
TXNRD1-223ENST00000531691 CUX1P39880 1505 aa20.56■□□□□ 0.88
TXNRD1-223ENST00000531691 PBRM1Q86U86 1689 aa20.45■□□□□ 0.86
TXNRD1-223ENST00000531691 ABCA10Q8WWZ4 1543 aa20.44■□□□□ 0.86
TXNRD1-223ENST00000531691 GRIN2AQ12879 1464 aa20.41■□□□□ 0.86
TXNRD1-223ENST00000531691 ERCC6L2Q5T890 1561 aa20.38■□□□□ 0.85
TXNRD1-223ENST00000531691 ABCA5Q8WWZ7 1642 aa20.37■□□□□ 0.85
TXNRD1-223ENST00000531691 NUP160Q12769 1436 aa20.36■□□□□ 0.85
TXNRD1-223ENST00000531691 CEP170Q5SW79 1584 aa20.35■□□□□ 0.85
TXNRD1-223ENST00000531691 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.84
TXNRD1-223ENST00000531691 FHAD1B1AJZ9 1412 aa20.3■□□□□ 0.84
TXNRD1-223ENST00000531691 NPM1P06748 294 aaKnown RBP eCLIP20.29■□□□□ 0.84
TXNRD1-223ENST00000531691 ADAMTS12P58397 1594 aa20.27■□□□□ 0.84
TXNRD1-223ENST00000531691 FAM69CQ0P6D2 419 aa20.27■□□□□ 0.84
TXNRD1-223ENST00000531691 SHROOM2Q13796 1616 aa20.25■□□□□ 0.83
TXNRD1-223ENST00000531691 JPH4Q96JJ6 628 aa20.25■□□□□ 0.83
TXNRD1-223ENST00000531691 PRG4Q92954 1404 aaPredicted RBP20.25■□□□□ 0.83
TXNRD1-223ENST00000531691 KIF13AQ9H1H9 1805 aa20.2■□□□□ 0.82
TXNRD1-223ENST00000531691 ABCC10Q5T3U5 1492 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms