RNA–Protein interactions for RNA: ENST00000621805.4

RAB18-209, Transcript of RAB18, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB18, Length 4,894 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB18-209ENST00000621805 NISCHQ9Y2I1 1504 aa10.74□□□□□ -0.69
RAB18-209ENST00000621805 DCAF8L2P0C7V8 631 aa9.36□□□□□ -0.91
RAB18-209ENST00000621805 CCDC180Q9P1Z9 1646 aa9.25□□□□□ -0.93
RAB18-209ENST00000621805 SHROOM4Q9ULL8 1493 aa9.14□□□□□ -0.95
RAB18-209ENST00000621805 SUPT5HO00267 1087 aaKnown RBP9.04□□□□□ -0.96
RAB18-209ENST00000621805 ZCCHC6Q5VYS8 1495 aaKnown RBP9.01□□□□□ -0.97
RAB18-209ENST00000621805 DCAF1Q9Y4B6 1507 aa8.85□□□□□ -0.99
RAB18-209ENST00000621805 ABCC9O60706 1549 aa8.75□□□□□ -1.01
RAB18-209ENST00000621805 NACADO15069 1562 aa8.7□□□□□ -1.02
RAB18-209ENST00000621805 MYO15BQ96JP2 1530 aa8.68□□□□□ -1.02
RAB18-209ENST00000621805 RB1CC1Q8TDY2 1594 aa8.64□□□□□ -1.03
RAB18-209ENST00000621805 SCRIBQ14160 1630 aa8.62□□□□□ -1.03
RAB18-209ENST00000621805 TRIM41Q8WV44 630 aa8.55□□□□□ -1.04
RAB18-209ENST00000621805 CHIC1Q5VXU3 224 aa8.53□□□□□ -1.04
RAB18-209ENST00000621805 RSF1Q96T23 1441 aaPredicted RBP8.41□□□□□ -1.06
RAB18-209ENST00000621805 BAZ1AQ9NRL2 1556 aaPredicted RBP8.38□□□□□ -1.07
RAB18-209ENST00000621805 FAM9AQ8IZU1 332 aaPredicted RBP8.37□□□□□ -1.07
RAB18-209ENST00000621805 PABPN1Q86U42 306 aaKnown RBP eCLIP8.36□□□□□ -1.07
RAB18-209ENST00000621805 APLP2Q06481 763 aa8.32□□□□□ -1.08
RAB18-209ENST00000621805 ZEB1P37275 1124 aaPredicted RBP8.28□□□□□ -1.08
RAB18-209ENST00000621805 EHMT2Q96KQ7 1210 aa8.27□□□□□ -1.09
RAB18-209ENST00000621805 PCGF6Q9BYE7 350 aa8.26□□□□□ -1.09
RAB18-209ENST00000621805 TRIM26Q12899 539 aaPredicted RBP8.25□□□□□ -1.09
RAB18-209ENST00000621805 CECR2Q9BXF3 1484 aa8.25□□□□□ -1.09
RAB18-209ENST00000621805 UBTFP17480 764 aaKnown RBP8.25□□□□□ -1.09
RAB18-209ENST00000621805 MROH2BQ7Z745 1585 aa8.24□□□□□ -1.09
RAB18-209ENST00000621805 TOP2AP11388 1531 aaKnown RBP8.22□□□□□ -1.09
RAB18-209ENST00000621805 LOC105371045A0A1W2PR82 267 aa8.21□□□□□ -1.09
RAB18-209ENST00000621805 SMARCA2P51531 1590 aa8.2□□□□□ -1.1
RAB18-209ENST00000621805 BAZ1BQ9UIG0 1483 aaKnown RBP8.2□□□□□ -1.1
RAB18-209ENST00000621805 SMARCA4P51532 1647 aa8.19□□□□□ -1.1
RAB18-209ENST00000621805 EEA1Q15075 1411 aa8.19□□□□□ -1.1
RAB18-209ENST00000621805 WIZO95785 1651 aa8.15□□□□□ -1.1
RAB18-209ENST00000621805 CSRNP3Q8WYN3 585 aa8.12□□□□□ -1.11
RAB18-209ENST00000621805 CCDC88BA6NC98 1476 aa8.11□□□□□ -1.11
RAB18-209ENST00000621805 HRCP23327 699 aa8.11□□□□□ -1.11
RAB18-209ENST00000621805 WRNQ14191 1432 aaPredicted RBP eCLIP8.09□□□□□ -1.11
RAB18-209ENST00000621805 ATAD2BQ9ULI0 1458 aa8.06□□□□□ -1.12
RAB18-209ENST00000621805 CCER1Q8TC90 406 aaPredicted RBP8.05□□□□□ -1.12
RAB18-209ENST00000621805 GOLGA3Q08378 1498 aa8.04□□□□□ -1.12
RAB18-209ENST00000621805 RANGAP1P46060 587 aaPredicted RBP8.03□□□□□ -1.12
RAB18-209ENST00000621805 CEP164Q9UPV0 1460 aa8.01□□□□□ -1.13
RAB18-209ENST00000621805 TNIKQ9UKE5 1360 aa8.01□□□□□ -1.13
RAB18-209ENST00000621805 TTBK1Q5TCY1 1321 aaPredicted RBP8□□□□□ -1.13
RAB18-209ENST00000621805 BICRAQ9NZM4 1560 aa8□□□□□ -1.13
RAB18-209ENST00000621805 UNC13AQ9UPW8 1703 aa7.99□□□□□ -1.13
RAB18-209ENST00000621805 PEG3Q9GZU2 1588 aa7.98□□□□□ -1.13
RAB18-209ENST00000621805 NCAPD3P42695 1498 aa7.97□□□□□ -1.13
RAB18-209ENST00000621805 KIF27Q86VH2 1401 aa7.97□□□□□ -1.13
RAB18-209ENST00000621805 HMGXB3Q12766 1538 aa7.96□□□□□ -1.13
RAB18-209ENST00000621805 ABCC8Q09428 1581 aa7.95□□□□□ -1.14
RAB18-209ENST00000621805 CEP162Q5TB80 1403 aa7.95□□□□□ -1.14
RAB18-209ENST00000621805 ATP1B4Q9UN42 357 aaPredicted RBP7.95□□□□□ -1.14
RAB18-209ENST00000621805 EIF4G1Q04637 1599 aaKnown RBP7.94□□□□□ -1.14
RAB18-209ENST00000621805 PPARGC1BQ86YN6 1023 aaKnown RBP7.94□□□□□ -1.14
RAB18-209ENST00000621805 CLIP1P30622 1438 aa7.93□□□□□ -1.14
RAB18-209ENST00000621805 SOGA1O94964 1423 aa7.9□□□□□ -1.15
RAB18-209ENST00000621805 CADPSQ9ULU8 1353 aa7.89□□□□□ -1.15
RAB18-209ENST00000621805 PDS5BQ9NTI5 1447 aa7.86□□□□□ -1.15
RAB18-209ENST00000621805 HNRNPUL2Q1KMD3 747 aaKnown RBP7.85□□□□□ -1.15
RAB18-209ENST00000621805 CFTRP13569 1480 aa7.83□□□□□ -1.16
RAB18-209ENST00000621805 CENPBP07199 599 aaPredicted RBP7.83□□□□□ -1.16
RAB18-209ENST00000621805 CUX2O14529 1486 aa7.83□□□□□ -1.16
RAB18-209ENST00000621805 KIF21BO75037 1637 aa7.82□□□□□ -1.16
RAB18-209ENST00000621805 TOP2BQ02880 1626 aa7.81□□□□□ -1.16
RAB18-209ENST00000621805 VPS8Q8N3P4 1428 aa7.81□□□□□ -1.16
RAB18-209ENST00000621805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.8□□□□□ -1.16
RAB18-209ENST00000621805 CARMIL1Q5VZK9 1371 aa7.8□□□□□ -1.16
RAB18-209ENST00000621805 FANCD2Q9BXW9 1451 aa7.79□□□□□ -1.16
RAB18-209ENST00000621805 FHAD1B1AJZ9 1412 aa7.79□□□□□ -1.16
RAB18-209ENST00000621805 ERICH3Q5RHP9 1530 aa7.79□□□□□ -1.16
RAB18-209ENST00000621805 SYNJ1O43426 1573 aa7.78□□□□□ -1.16
RAB18-209ENST00000621805 CC2D2AQ9P2K1 1620 aa7.78□□□□□ -1.16
RAB18-209ENST00000621805 RAPGEF2Q9Y4G8 1499 aa7.77□□□□□ -1.17
RAB18-209ENST00000621805 PELP1Q8IZL8 1130 aaKnown RBP7.77□□□□□ -1.17
RAB18-209ENST00000621805 FAM50AQ14320 339 aaKnown RBP7.77□□□□□ -1.17
RAB18-209ENST00000621805 ITGAEP38570 1179 aa7.76□□□□□ -1.17
RAB18-209ENST00000621805 CDK11AQ9UQ88 783 aaPredicted RBP7.75□□□□□ -1.17
RAB18-209ENST00000621805 ACIN1Q9UKV3 1341 aaKnown RBP7.75□□□□□ -1.17
RAB18-209ENST00000621805 BIVM-ERCC5R4GMW8 1640 aa7.74□□□□□ -1.17
RAB18-209ENST00000621805 RUSC2Q8N2Y8 1516 aa7.74□□□□□ -1.17
RAB18-209ENST00000621805 FGD5Q6ZNL6 1462 aa7.73□□□□□ -1.17
RAB18-209ENST00000621805 ERCC6Q03468 1493 aa7.72□□□□□ -1.17
RAB18-209ENST00000621805 P3H3Q8IVL6 736 aa7.72□□□□□ -1.17
RAB18-209ENST00000621805 CUX1P39880 1505 aa7.71□□□□□ -1.17
RAB18-209ENST00000621805 LAMC3Q9Y6N6 1575 aa7.71□□□□□ -1.18
RAB18-209ENST00000621805 CLSPNQ9HAW4 1339 aa7.7□□□□□ -1.18
RAB18-209ENST00000621805 DNMBPQ6XZF7 1577 aa7.7□□□□□ -1.18
RAB18-209ENST00000621805 MTUS2Q5JR59 1369 aa7.7□□□□□ -1.18
RAB18-209ENST00000621805 FMN1Q68DA7 1419 aa7.69□□□□□ -1.18
RAB18-209ENST00000621805 ZNF316A6NFI3 1004 aaPredicted RBP7.69□□□□□ -1.18
RAB18-209ENST00000621805 PRXQ9BXM0 1461 aa7.69□□□□□ -1.18
RAB18-209ENST00000621805 DIEXFQ68CQ4 756 aaKnown RBP7.68□□□□□ -1.18
RAB18-209ENST00000621805 FBLN2P98095 1184 aa7.67□□□□□ -1.18
RAB18-209ENST00000621805 IGF1RP08069 1367 aa7.67□□□□□ -1.18
RAB18-209ENST00000621805 CHMP7Q8WUX9 453 aaPredicted RBP7.67□□□□□ -1.18
RAB18-209ENST00000621805 PRDM2Q13029 1718 aa7.66□□□□□ -1.18
RAB18-209ENST00000621805 CCNB3Q8WWL7 1395 aa7.65□□□□□ -1.18
RAB18-209ENST00000621805 TOPBP1Q92547 1522 aa7.65□□□□□ -1.18
RAB18-209ENST00000621805 EFCAB5A4FU69 1503 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms