RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 PELP1Q8IZL8 1130 aaKnown RBP19.79■□□□□ 0.76
CDK5RAP2-201ENST00000349780 MYT1Q01538 1121 aa19.63■□□□□ 0.73
CDK5RAP2-201ENST00000349780 DCAF8L2P0C7V8 631 aa18.8■□□□□ 0.6
CDK5RAP2-201ENST00000349780 PCGF6Q9BYE7 350 aa18.73■□□□□ 0.59
CDK5RAP2-201ENST00000349780 CENPBP07199 599 aaPredicted RBP18.68■□□□□ 0.58
CDK5RAP2-201ENST00000349780 SUPT5HO00267 1087 aaKnown RBP18.63■□□□□ 0.57
CDK5RAP2-201ENST00000349780 HRCP23327 699 aa18.47■□□□□ 0.55
CDK5RAP2-201ENST00000349780 ERICH6Q7L0X2 663 aa18.44■□□□□ 0.54
CDK5RAP2-201ENST00000349780 ZEB1P37275 1124 aaPredicted RBP18.41■□□□□ 0.54
CDK5RAP2-201ENST00000349780 CCER1Q8TC90 406 aaPredicted RBP18.14■□□□□ 0.5
CDK5RAP2-201ENST00000349780 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP2-201ENST00000349780 YTHDC1Q96MU7 727 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP2-201ENST00000349780 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.48
CDK5RAP2-201ENST00000349780 SHROOM4Q9ULL8 1493 aa18.03■□□□□ 0.48
CDK5RAP2-201ENST00000349780 EHMT2Q96KQ7 1210 aa18.01■□□□□ 0.47
CDK5RAP2-201ENST00000349780 NISCHQ9Y2I1 1504 aa17.97■□□□□ 0.47
CDK5RAP2-201ENST00000349780 NEFLP07196 543 aa17.77■□□□□ 0.43
CDK5RAP2-201ENST00000349780 GTF3C3Q9Y5Q9 886 aa17.75■□□□□ 0.43
CDK5RAP2-201ENST00000349780 TRIM26Q12899 539 aaPredicted RBP17.74■□□□□ 0.43
CDK5RAP2-201ENST00000349780 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP2-201ENST00000349780 ACIN1Q9UKV3 1341 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP2-201ENST00000349780 DIEXFQ68CQ4 756 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP2-201ENST00000349780 SCAF1Q9H7N4 1312 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP2-201ENST00000349780 APLP2Q06481 763 aa17.42■□□□□ 0.38
CDK5RAP2-201ENST00000349780 RTL5Q5HYW3 569 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP2-201ENST00000349780 BCANQ96GW7 911 aa17.15■□□□□ 0.34
CDK5RAP2-201ENST00000349780 BCL11AQ9H165 835 aa17.14■□□□□ 0.33
CDK5RAP2-201ENST00000349780 DAXXQ9UER7 740 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP2-201ENST00000349780 LOC105371045A0A1W2PR82 267 aa17.13■□□□□ 0.33
CDK5RAP2-201ENST00000349780 NEUROD1Q13562 356 aa17.12■□□□□ 0.33
CDK5RAP2-201ENST00000349780 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
CDK5RAP2-201ENST00000349780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
CDK5RAP2-201ENST00000349780 EIF5BO60841 1220 aaKnown RBP17.06■□□□□ 0.32
CDK5RAP2-201ENST00000349780 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
CDK5RAP2-201ENST00000349780 ANP32EQ9BTT0 268 aa17■□□□□ 0.31
CDK5RAP2-201ENST00000349780 CDK11AQ9UQ88 783 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP2-201ENST00000349780 MYT1LQ9UL68 1186 aa16.92■□□□□ 0.3
CDK5RAP2-201ENST00000349780 GLIPR1L2Q4G1C9 344 aa16.91■□□□□ 0.3
CDK5RAP2-201ENST00000349780 CLSPNQ9HAW4 1339 aa16.86■□□□□ 0.29
CDK5RAP2-201ENST00000349780 ZNF316A6NFI3 1004 aaPredicted RBP16.85■□□□□ 0.29
CDK5RAP2-201ENST00000349780 RANGAP1P46060 587 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP2-201ENST00000349780 UBTFP17480 764 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP2-201ENST00000349780 HNRNPUL2Q1KMD3 747 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP2-201ENST00000349780 FKBP8Q14318 412 aa16.66■□□□□ 0.26
CDK5RAP2-201ENST00000349780 NBR1Q14596 966 aa16.66■□□□□ 0.26
CDK5RAP2-201ENST00000349780 ANP32AP39687 249 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP2-201ENST00000349780 DCAF1Q9Y4B6 1507 aa16.54■□□□□ 0.24
CDK5RAP2-201ENST00000349780 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
CDK5RAP2-201ENST00000349780 NPM2Q86SE8 214 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP2-201ENST00000349780 ANP32CO43423 234 aa16.44■□□□□ 0.22
CDK5RAP2-201ENST00000349780 ITGAEP38570 1179 aa16.43■□□□□ 0.22
CDK5RAP2-201ENST00000349780 RTN4Q9NQC3 1192 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP2-201ENST00000349780 MIER1Q8N108 512 aa16.41■□□□□ 0.22
CDK5RAP2-201ENST00000349780 CNGB1Q14028 1251 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP2-201ENST00000349780 ZBTB47Q9UFB7 747 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP2-201ENST00000349780 ATP1B4Q9UN42 357 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP2-201ENST00000349780 POLR3GLQ9BT43 218 aa16.38■□□□□ 0.21
CDK5RAP2-201ENST00000349780 PRKCSHP14314 528 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP2-201ENST00000349780 DEKP35659 375 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP2-201ENST00000349780 SUPT16HQ9Y5B9 1047 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP2-201ENST00000349780 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP2-201ENST00000349780 CCDC180Q9P1Z9 1646 aa16.21■□□□□ 0.19
CDK5RAP2-201ENST00000349780 TSHZ2Q9NRE2 1034 aa16.15■□□□□ 0.18
CDK5RAP2-201ENST00000349780 NEFMP07197 916 aa16.14■□□□□ 0.17
CDK5RAP2-201ENST00000349780 RBM19Q9Y4C8 960 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP2-201ENST00000349780 TRIM52Q96A61 297 aa16.12■□□□□ 0.17
CDK5RAP2-201ENST00000349780 ANP32BQ92688 251 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP2-201ENST00000349780 IRX6P78412 446 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP2-201ENST00000349780 NOP58Q9Y2X3 529 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP2-201ENST00000349780 CCDC136Q96JN2 1154 aa16.11■□□□□ 0.17
CDK5RAP2-201ENST00000349780 ARXQ96QS3 562 aa16.11■□□□□ 0.17
CDK5RAP2-201ENST00000349780 HNRNPUQ00839 825 aaKnown RBP eCLIP16.1■□□□□ 0.17
CDK5RAP2-201ENST00000349780 ERICH6BQ5W0A0 696 aa16.1■□□□□ 0.17
CDK5RAP2-201ENST00000349780 MYO15BQ96JP2 1530 aa16.1■□□□□ 0.17
CDK5RAP2-201ENST00000349780 NAP1L5Q96NT1 182 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP2-201ENST00000349780 DDX10Q13206 875 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP2-201ENST00000349780 TNNT2P45379 298 aaPredicted RBP16■□□□□ 0.15
CDK5RAP2-201ENST00000349780 ABCC9O60706 1549 aa15.99■□□□□ 0.15
CDK5RAP2-201ENST00000349780 PPM1GO15355 546 aaPredicted RBP15.98■□□□□ 0.15
CDK5RAP2-201ENST00000349780 LAS1LQ9Y4W2 734 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP2-201ENST00000349780 DDRGK1Q96HY6 314 aa15.95■□□□□ 0.14
CDK5RAP2-201ENST00000349780 TRIM44Q96DX7 344 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP2-201ENST00000349780 FAM50AQ14320 339 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP2-201ENST00000349780 ANO8Q9HCE9 1232 aaPredicted RBP15.88■□□□□ 0.13
CDK5RAP2-201ENST00000349780 FAM9BQ8IZU0 186 aa15.88■□□□□ 0.13
CDK5RAP2-201ENST00000349780 HSP90AA1P07900 732 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP2-201ENST00000349780 CDK11BP21127 795 aaKnown RBP15.83■□□□□ 0.13
CDK5RAP2-201ENST00000349780 VSIG10Q8N0Z9 540 aa15.83■□□□□ 0.13
CDK5RAP2-201ENST00000349780 UPF2Q9HAU5 1272 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP2-201ENST00000349780 PKNOX2Q96KN3 472 aa15.82■□□□□ 0.12
CDK5RAP2-201ENST00000349780 PPP4R2Q9NY27 417 aa15.82■□□□□ 0.12
CDK5RAP2-201ENST00000349780 CANXP27824 592 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP2-201ENST00000349780 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.122e-6■□□□□ 9.6
CDK5RAP2-201ENST00000349780 RSPH6AQ9H0K4 717 aa15.76■□□□□ 0.11
CDK5RAP2-201ENST00000349780 NCLP19338 710 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP2-201ENST00000349780 AMER1Q5JTC6 1135 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP2-201ENST00000349780 ARID4BQ4LE39 1312 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP2-201ENST00000349780 PODXL2Q9NZ53 605 aa15.72■□□□□ 0.11
CDK5RAP2-201ENST00000349780 BECN1Q14457 450 aa15.7■□□□□ 0.1
CDK5RAP2-201ENST00000349780 HSP90AA2PQ14568 343 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms