RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 NISCHQ9Y2I1 1504 aa16.46■□□□□ 0.23
CDK5RAP2-216ENST00000483412 DCAF8L2P0C7V8 631 aa16.31■□□□□ 0.2
CDK5RAP2-216ENST00000483412 SUPT5HO00267 1087 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP2-216ENST00000483412 PELP1Q8IZL8 1130 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP2-216ENST00000483412 SHROOM4Q9ULL8 1493 aa15.34■□□□□ 0.05
CDK5RAP2-216ENST00000483412 EHMT2Q96KQ7 1210 aa15.14■□□□□ 0.01
CDK5RAP2-216ENST00000483412 PCGF6Q9BYE7 350 aa14.88□□□□□ -0.03
CDK5RAP2-216ENST00000483412 MYT1Q01538 1121 aa14.87□□□□□ -0.03
CDK5RAP2-216ENST00000483412 ERICH6Q7L0X2 663 aa14.85□□□□□ -0.03
CDK5RAP2-216ENST00000483412 CENPBP07199 599 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP2-216ENST00000483412 APLP2Q06481 763 aa14.74□□□□□ -0.05
CDK5RAP2-216ENST00000483412 TTBK1Q5TCY1 1321 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP2-216ENST00000483412 CCER1Q8TC90 406 aaPredicted RBP14.66□□□□□ -0.06
CDK5RAP2-216ENST00000483412 ZEB1P37275 1124 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP2-216ENST00000483412 FAM9AQ8IZU1 332 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP2-216ENST00000483412 YTHDC1Q96MU7 727 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP2-216ENST00000483412 NEFLP07196 543 aa14.4□□□□□ -0.1
CDK5RAP2-216ENST00000483412 RANGAP1P46060 587 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP2-216ENST00000483412 TRIM41Q8WV44 630 aa14.26□□□□□ -0.13
CDK5RAP2-216ENST00000483412 ABCC9O60706 1549 aa14.2□□□□□ -0.14
CDK5RAP2-216ENST00000483412 HRCP23327 699 aa14.2□□□□□ -0.14
CDK5RAP2-216ENST00000483412 ATP1B4Q9UN42 357 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP2-216ENST00000483412 PPARGC1BQ86YN6 1023 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP2-216ENST00000483412 TRIM26Q12899 539 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP2-216ENST00000483412 UBTFP17480 764 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP2-216ENST00000483412 DAXXQ9UER7 740 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP2-216ENST00000483412 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDK5RAP2-216ENST00000483412 RTL5Q5HYW3 569 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP2-216ENST00000483412 POLR3GLQ9BT43 218 aa13.82□□□□□ -0.2
CDK5RAP2-216ENST00000483412 DIEXFQ68CQ4 756 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP2-216ENST00000483412 LOC105371045A0A1W2PR82 267 aa13.8□□□□□ -0.2
CDK5RAP2-216ENST00000483412 ITGAEP38570 1179 aa13.79□□□□□ -0.2
CDK5RAP2-216ENST00000483412 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP2-216ENST00000483412 CHIC1Q5VXU3 224 aa13.74□□□□□ -0.21
CDK5RAP2-216ENST00000483412 CNGB1Q14028 1251 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP2-216ENST00000483412 ZNF316A6NFI3 1004 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP2-216ENST00000483412 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
CDK5RAP2-216ENST00000483412 CCDC180Q9P1Z9 1646 aa13.72□□□□□ -0.21
CDK5RAP2-216ENST00000483412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP2-216ENST00000483412 BCANQ96GW7 911 aa13.67□□□□□ -0.22
CDK5RAP2-216ENST00000483412 ZCCHC6Q5VYS8 1495 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP2-216ENST00000483412 SCRIBQ14160 1630 aa13.62□□□□□ -0.23
CDK5RAP2-216ENST00000483412 CLSPNQ9HAW4 1339 aa13.61□□□□□ -0.23
CDK5RAP2-216ENST00000483412 CDK11AQ9UQ88 783 aaPredicted RBP13.52□□□□□ -0.24
CDK5RAP2-216ENST00000483412 ACIN1Q9UKV3 1341 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP2-216ENST00000483412 MYT1LQ9UL68 1186 aa13.46□□□□□ -0.25
CDK5RAP2-216ENST00000483412 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP2-216ENST00000483412 NEUROD1Q13562 356 aa13.4□□□□□ -0.26
CDK5RAP2-216ENST00000483412 ANP32CO43423 234 aa13.39□□□□□ -0.27
CDK5RAP2-216ENST00000483412 RB1CC1Q8TDY2 1594 aa13.38□□□□□ -0.27
CDK5RAP2-216ENST00000483412 FAM50AQ14320 339 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP2-216ENST00000483412 EIF5BO60841 1220 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP2-216ENST00000483412 ANP32AP39687 249 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP2-216ENST00000483412 FBLN2P98095 1184 aa13.3□□□□□ -0.28
CDK5RAP2-216ENST00000483412 TRIM52Q96A61 297 aa13.3□□□□□ -0.28
CDK5RAP2-216ENST00000483412 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
CDK5RAP2-216ENST00000483412 NPM2Q86SE8 214 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP2-216ENST00000483412 NACADO15069 1562 aa13.26□□□□□ -0.29
CDK5RAP2-216ENST00000483412 FKBP8Q14318 412 aa13.2□□□□□ -0.3
CDK5RAP2-216ENST00000483412 ZNF326Q5BKZ1 582 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP2-216ENST00000483412 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP2-216ENST00000483412 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
CDK5RAP2-216ENST00000483412 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP2-216ENST00000483412 BCL11AQ9H165 835 aa13.17□□□□□ -0.3
CDK5RAP2-216ENST00000483412 P3H3Q8IVL6 736 aa13.15□□□□□ -0.31
CDK5RAP2-216ENST00000483412 GLIPR1L2Q4G1C9 344 aa13.14□□□□□ -0.31
CDK5RAP2-216ENST00000483412 SCAF1Q9H7N4 1312 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP2-216ENST00000483412 NBR1Q14596 966 aa13.12□□□□□ -0.31
CDK5RAP2-216ENST00000483412 ARID3CA6NKF2 412 aa13.08□□□□□ -0.32
CDK5RAP2-216ENST00000483412 ANP32BQ92688 251 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP2-216ENST00000483412 RSF1Q96T23 1441 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP2-216ENST00000483412 DCAF1Q9Y4B6 1507 aa13.05□□□□□ -0.32
CDK5RAP2-216ENST00000483412 HNRNPUQ00839 825 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDK5RAP2-216ENST00000483412 BAZ1BQ9UIG0 1483 aaKnown RBP13□□□□□ -0.33
CDK5RAP2-216ENST00000483412 HSP90AA1P07900 732 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP2-216ENST00000483412 ARXQ96QS3 562 aa12.98□□□□□ -0.33
CDK5RAP2-216ENST00000483412 FAM9BQ8IZU0 186 aa12.95□□□□□ -0.34
CDK5RAP2-216ENST00000483412 UPF2Q9HAU5 1272 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP2-216ENST00000483412 DDX10Q13206 875 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP2-216ENST00000483412 NEFMP07197 916 aa12.93□□□□□ -0.34
CDK5RAP2-216ENST00000483412 BAZ1AQ9NRL2 1556 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP2-216ENST00000483412 CCDC136Q96JN2 1154 aa12.92□□□□□ -0.34
CDK5RAP2-216ENST00000483412 ZNF777Q9ULD5 760 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP2-216ENST00000483412 CECR2Q9BXF3 1484 aa12.91□□□□□ -0.34
CDK5RAP2-216ENST00000483412 IRX6P78412 446 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP2-216ENST00000483412 MIER1Q8N108 512 aa12.88□□□□□ -0.35
CDK5RAP2-216ENST00000483412 ANP32EQ9BTT0 268 aa12.88□□□□□ -0.35
CDK5RAP2-216ENST00000483412 SALL2Q9Y467 1007 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP2-216ENST00000483412 TONSLQ96HA7 1378 aa12.87□□□□□ -0.35
CDK5RAP2-216ENST00000483412 CHMP7Q8WUX9 453 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP2-216ENST00000483412 WRNQ14191 1432 aaPredicted RBP eCLIP12.84□□□□□ -0.35
CDK5RAP2-216ENST00000483412 NPM1P06748 294 aaKnown RBP eCLIP12.8□□□□□ -0.36
CDK5RAP2-216ENST00000483412 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP2-216ENST00000483412 EEA1Q15075 1411 aa12.77□□□□□ -0.37
CDK5RAP2-216ENST00000483412 CLIP1P30622 1438 aa12.77□□□□□ -0.37
CDK5RAP2-216ENST00000483412 TMC1Q8TDI8 760 aa12.76□□□□□ -0.37
CDK5RAP2-216ENST00000483412 ERCC6Q03468 1493 aa12.76□□□□□ -0.37
CDK5RAP2-216ENST00000483412 MROH2BQ7Z745 1585 aa12.76□□□□□ -0.37
CDK5RAP2-216ENST00000483412 MRS2Q9HD23 443 aa12.75□□□□□ -0.37
CDK5RAP2-216ENST00000483412 DDRGK1Q96HY6 314 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms