RNA–Protein interactions for RNA: ENST00000611151.4

RAB18-208, Transcript of RAB18, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB18, Length 4,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB18-208ENST00000611151 DCAF8L2P0C7V8 631 aa24.5■■□□□ 1.51
RAB18-208ENST00000611151 NISCHQ9Y2I1 1504 aa23.55■■□□□ 1.36
RAB18-208ENST00000611151 SUPT5HO00267 1087 aaKnown RBP23.05■■□□□ 1.28
RAB18-208ENST00000611151 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
RAB18-208ENST00000611151 EHMT2Q96KQ7 1210 aa22.2■■□□□ 1.14
RAB18-208ENST00000611151 APLP2Q06481 763 aa21.84■■□□□ 1.09
RAB18-208ENST00000611151 FAM9AQ8IZU1 332 aaPredicted RBP21.73■■□□□ 1.07
RAB18-208ENST00000611151 TTBK1Q5TCY1 1321 aaPredicted RBP21.4■■□□□ 1.02
RAB18-208ENST00000611151 TRIM41Q8WV44 630 aa21.38■■□□□ 1.01
RAB18-208ENST00000611151 RANGAP1P46060 587 aaPredicted RBP21.34■■□□□ 1.01
RAB18-208ENST00000611151 PCGF6Q9BYE7 350 aa21.19■□□□□ 0.98
RAB18-208ENST00000611151 ATP1B4Q9UN42 357 aaPredicted RBP21.17■□□□□ 0.98
RAB18-208ENST00000611151 PELP1Q8IZL8 1130 aaKnown RBP21.16■□□□□ 0.98
RAB18-208ENST00000611151 UBTFP17480 764 aaKnown RBP21.14■□□□□ 0.97
RAB18-208ENST00000611151 CCER1Q8TC90 406 aaPredicted RBP20.9■□□□□ 0.94
RAB18-208ENST00000611151 ZEB1P37275 1124 aaPredicted RBP20.8■□□□□ 0.92
RAB18-208ENST00000611151 PPARGC1BQ86YN6 1023 aaKnown RBP20.61■□□□□ 0.89
RAB18-208ENST00000611151 CENPBP07199 599 aaPredicted RBP20.58■□□□□ 0.88
RAB18-208ENST00000611151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.53■□□□□ 0.88
RAB18-208ENST00000611151 HNRNPUL2Q1KMD3 747 aaKnown RBP20.53■□□□□ 0.88
RAB18-208ENST00000611151 ABCC9O60706 1549 aa20.5■□□□□ 0.87
RAB18-208ENST00000611151 MYT1LQ9UL68 1186 aa20.42■□□□□ 0.86
RAB18-208ENST00000611151 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
RAB18-208ENST00000611151 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
RAB18-208ENST00000611151 ITGAEP38570 1179 aa20.39■□□□□ 0.86
RAB18-208ENST00000611151 TRIM26Q12899 539 aaPredicted RBP20.37■□□□□ 0.85
RAB18-208ENST00000611151 LOC105371045A0A1W2PR82 267 aa20.36■□□□□ 0.85
RAB18-208ENST00000611151 NEFLP07196 543 aa20.24■□□□□ 0.83
RAB18-208ENST00000611151 YTHDC1Q96MU7 727 aaKnown RBP20.22■□□□□ 0.83
RAB18-208ENST00000611151 ERICH6Q7L0X2 663 aa20.21■□□□□ 0.83
RAB18-208ENST00000611151 POLR3GLQ9BT43 218 aa20.11■□□□□ 0.81
RAB18-208ENST00000611151 HRCP23327 699 aa19.96■□□□□ 0.79
RAB18-208ENST00000611151 FAM50AQ14320 339 aaKnown RBP19.91■□□□□ 0.78
RAB18-208ENST00000611151 CNGB1Q14028 1251 aaPredicted RBP19.88■□□□□ 0.77
RAB18-208ENST00000611151 FBLN2P98095 1184 aa19.88■□□□□ 0.77
RAB18-208ENST00000611151 TRIM52Q96A61 297 aa19.79■□□□□ 0.76
RAB18-208ENST00000611151 SLC4A1APQ9BWU0 796 aaKnown RBP19.79■□□□□ 0.76
RAB18-208ENST00000611151 CSRNP3Q8WYN3 585 aa19.63■□□□□ 0.73
RAB18-208ENST00000611151 NEUROD1Q13562 356 aa19.62■□□□□ 0.73
RAB18-208ENST00000611151 P3H3Q8IVL6 736 aa19.6■□□□□ 0.73
RAB18-208ENST00000611151 DAXXQ9UER7 740 aaPredicted RBP19.58■□□□□ 0.72
RAB18-208ENST00000611151 SCRIBQ14160 1630 aa19.58■□□□□ 0.72
RAB18-208ENST00000611151 ARID3CA6NKF2 412 aa19.54■□□□□ 0.72
RAB18-208ENST00000611151 DIEXFQ68CQ4 756 aaKnown RBP19.54■□□□□ 0.72
RAB18-208ENST00000611151 ZNF326Q5BKZ1 582 aaKnown RBP19.53■□□□□ 0.72
RAB18-208ENST00000611151 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
RAB18-208ENST00000611151 CDK11AQ9UQ88 783 aaPredicted RBP19.43■□□□□ 0.7
RAB18-208ENST00000611151 ZNF777Q9ULD5 760 aaPredicted RBP19.4■□□□□ 0.7
RAB18-208ENST00000611151 CLSPNQ9HAW4 1339 aa19.34■□□□□ 0.69
RAB18-208ENST00000611151 ANP32CO43423 234 aa19.31■□□□□ 0.68
RAB18-208ENST00000611151 BCANQ96GW7 911 aa19.29■□□□□ 0.68
RAB18-208ENST00000611151 NPM1P06748 294 aaKnown RBP eCLIP19.24■□□□□ 0.67
RAB18-208ENST00000611151 CCDC180Q9P1Z9 1646 aa19.2■□□□□ 0.66
RAB18-208ENST00000611151 ESF1Q9H501 851 aaKnown RBP19.2■□□□□ 0.66
RAB18-208ENST00000611151 ZNF316A6NFI3 1004 aaPredicted RBP19.17■□□□□ 0.66
RAB18-208ENST00000611151 NEFMP07197 916 aa19.12■□□□□ 0.65
RAB18-208ENST00000611151 MYT1Q01538 1121 aa19.11■□□□□ 0.65
RAB18-208ENST00000611151 SLC24A1O60721 1099 aa19.08■□□□□ 0.65
RAB18-208ENST00000611151 RB1CC1Q8TDY2 1594 aa19.08■□□□□ 0.65
RAB18-208ENST00000611151 CHGAP10645 457 aaKnown RBP19.08■□□□□ 0.64
RAB18-208ENST00000611151 CHMP7Q8WUX9 453 aaPredicted RBP19.07■□□□□ 0.64
RAB18-208ENST00000611151 ZBTB47Q9UFB7 747 aaPredicted RBP19.07■□□□□ 0.64
RAB18-208ENST00000611151 STAG3Q9UJ98 1225 aa19.06■□□□□ 0.64
RAB18-208ENST00000611151 TONSLQ96HA7 1378 aa19.02■□□□□ 0.64
RAB18-208ENST00000611151 CANXP27824 592 aaKnown RBP19■□□□□ 0.63
RAB18-208ENST00000611151 CHIC2Q9UKJ5 165 aa19■□□□□ 0.63
RAB18-208ENST00000611151 RTL5Q5HYW3 569 aaPredicted RBP18.99■□□□□ 0.63
RAB18-208ENST00000611151 TSPY4P0CV99 314 aa18.98■□□□□ 0.63
RAB18-208ENST00000611151 TSPY10P0CW01 314 aa18.98■□□□□ 0.63
RAB18-208ENST00000611151 PLPPR3Q6T4P5 718 aa18.97■□□□□ 0.63
RAB18-208ENST00000611151 MTUS2Q5JR59 1369 aa18.95■□□□□ 0.62
RAB18-208ENST00000611151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.95■□□□□ 0.622e-7■■□□□ 13.4
RAB18-208ENST00000611151 GTF3C3Q9Y5Q9 886 aa18.92■□□□□ 0.62
RAB18-208ENST00000611151 BCL11AQ9H165 835 aa18.91■□□□□ 0.62
RAB18-208ENST00000611151 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.61
RAB18-208ENST00000611151 NACADO15069 1562 aa18.87■□□□□ 0.61
RAB18-208ENST00000611151 CLIP1P30622 1438 aa18.86■□□□□ 0.61
RAB18-208ENST00000611151 DCAF1Q9Y4B6 1507 aa18.83■□□□□ 0.6
RAB18-208ENST00000611151 BAZ1BQ9UIG0 1483 aaKnown RBP18.82■□□□□ 0.6
RAB18-208ENST00000611151 DDX10Q13206 875 aaKnown RBP18.79■□□□□ 0.6
RAB18-208ENST00000611151 KCNH8Q96L42 1107 aa18.79■□□□□ 0.6
RAB18-208ENST00000611151 PLEKHD1A6NEE1 506 aa18.78■□□□□ 0.6
RAB18-208ENST00000611151 EEA1Q15075 1411 aa18.78■□□□□ 0.6
RAB18-208ENST00000611151 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
RAB18-208ENST00000611151 KDM2AQ9Y2K7 1162 aa18.76■□□□□ 0.59
RAB18-208ENST00000611151 RRP7BPQ9NSQ0 103 aa18.71■□□□□ 0.59
RAB18-208ENST00000611151 HNRNPUQ00839 825 aaKnown RBP eCLIP18.7■□□□□ 0.58
RAB18-208ENST00000611151 FAM9BQ8IZU0 186 aa18.7■□□□□ 0.58
RAB18-208ENST00000611151 GOLGA3Q08378 1498 aa18.69■□□□□ 0.58
RAB18-208ENST00000611151 KIF27Q86VH2 1401 aa18.69■□□□□ 0.58
RAB18-208ENST00000611151 TMC1Q8TDI8 760 aa18.67■□□□□ 0.58
RAB18-208ENST00000611151 ACIN1Q9UKV3 1341 aaKnown RBP18.67■□□□□ 0.58
RAB18-208ENST00000611151 SALL2Q9Y467 1007 aaPredicted RBP18.65■□□□□ 0.58
RAB18-208ENST00000611151 CEP162Q5TB80 1403 aa18.63■□□□□ 0.57
RAB18-208ENST00000611151 CFDP1Q9UEE9 299 aaPredicted RBP18.62■□□□□ 0.57
RAB18-208ENST00000611151 ERCC6Q03468 1493 aa18.61■□□□□ 0.57
RAB18-208ENST00000611151 BAZ1AQ9NRL2 1556 aaPredicted RBP18.59■□□□□ 0.57
RAB18-208ENST00000611151 PPP1R15AO75807 674 aaPredicted RBP18.58■□□□□ 0.56
RAB18-208ENST00000611151 WDR43Q15061 677 aaKnown RBP eCLIP18.57■□□□□ 0.56
RAB18-208ENST00000611151 EIF4G2P78344 907 aaKnown RBP eCLIP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms