Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 JKAMP-214ENST00000602482 2302 ntTSL 1 (best)2.77□□□□□ -1.972e-6■□□□□ 10.1
PRPF8Q6P2Q9 MTFR1-211ENST00000523158 542 ntTSL 32.46□□□□□ -2.022e-6■□□□□ 10.1
PRPF8Q6P2Q9 TRIP12-214ENST00000477441 581 ntTSL 32.31□□□□□ -2.044e-6■□□□□ 10.1
PRPF8Q6P2Q9 JKAMP-208ENST00000554721 1951 ntTSL 22.16□□□□□ -2.062e-6■□□□□ 10.1
PRPF8Q6P2Q9 MNAT1-205ENST00000554641 596 ntTSL 32.03□□□□□ -2.082e-6■□□□□ 10.1
PRPF8Q6P2Q9 SUB1-202ENST00000502453 4273 ntTSL 1 (best)1.77□□□□□ -2.132e-6■□□□□ 10.1
PRPF8Q6P2Q9 GTF2H3-203ENST00000537368 558 ntTSL 21.72□□□□□ -2.132e-6■□□□□ 10.1
PRPF8Q6P2Q9 JKAMP-211ENST00000555491 619 ntTSL 31.59□□□□□ -2.152e-6■□□□□ 10.1
PRPF8Q6P2Q9 JKAMP-206ENST00000553941 1191 ntTSL 21.46□□□□□ -2.182e-6■□□□□ 10.1
PRPF8Q6P2Q9 MTFR1-205ENST00000518352 574 ntTSL 31.44□□□□□ -2.182e-6■□□□□ 10.1
PRPF8Q6P2Q9 PICALM-221ENST00000533350 541 ntTSL 31.28□□□□□ -2.29e-11■□□□□ 10.1
PRPF8Q6P2Q9 PLEKHA5-206ENST00000535357 597 ntTSL 31.27□□□□□ -2.212e-6■□□□□ 10.1
PRPF8Q6P2Q9 GTF2H3-210ENST00000543005 585 ntTSL 31.07□□□□□ -2.242e-6■□□□□ 10.1
PRPF8Q6P2Q9 MNAT1-204ENST00000554002 616 ntTSL 31.06□□□□□ -2.242e-6■□□□□ 10.1
PRPF8Q6P2Q9 MTFR1-208ENST00000520398 417 ntTSL 20.9□□□□□ -2.262e-6■□□□□ 10.1
PRPF8Q6P2Q9 LUC7L3-218ENST00000511068 277 ntTSL 20.32□□□□□ -2.365e-8■□□□□ 10.1
PRPF8Q6P2Q9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.53□□□□□ -2.494e-9■□□□□ 10.1
PRPF8Q6P2Q9 MTFR1-214ENST00000527155 679 ntTSL 3-0.9□□□□□ -2.552e-6■□□□□ 10.1
PRPF8Q6P2Q9 LSS-210ENST00000491729 2143 ntTSL 210.47□□□□□ -0.731e-8■□□□□ 10.1
PRPF8Q6P2Q9 LSS-208ENST00000474319 3601 ntTSL 28.73□□□□□ -1.011e-8■□□□□ 10.1
PRPF8Q6P2Q9 LSS-203ENST00000419093 517 ntTSL 38.08□□□□□ -1.121e-8■□□□□ 10.1
PRPF8Q6P2Q9 SLCO4A1-207ENST00000495889 543 ntTSL 315.07■□□□□ 01e-9■□□□□ 10.1
PRPF8Q6P2Q9 SLCO4A1-205ENST00000466961 819 ntTSL 310.91□□□□□ -0.661e-9■□□□□ 10.1
PRPF8Q6P2Q9 SLCO4A1-206ENST00000470412 986 ntTSL 59.34□□□□□ -0.911e-9■□□□□ 10.1
PRPF8Q6P2Q9 C16orf58-205ENST00000565128 584 ntTSL 419.93■□□□□ 0.787e-7■□□□□ 10.1
PRPF8Q6P2Q9 ACSM3-215ENST00000614721 3311 ntTSL 1 (best)7.43□□□□□ -1.222e-12■□□□□ 10.1
PRPF8Q6P2Q9 KDM7A-202ENST00000472616 7943 ntTSL 1 (best)5.4□□□□□ -1.542e-12■□□□□ 10.1
PRPF8Q6P2Q9 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.61□□□□□ -2.153e-8■□□□□ 10.1
PRPF8Q6P2Q9 C11orf95-203ENST00000445014 827 ntTSL 523.58■■□□□ 1.363e-11■□□□□ 10.1
PRPF8Q6P2Q9 C11orf95-201ENST00000338498 723 ntTSL 1 (best)18.36■□□□□ 0.533e-11■□□□□ 10.1
PRPF8Q6P2Q9 GNL1-205ENST00000487166 522 ntTSL 313.4□□□□□ -0.263e-11■□□□□ 10.1
PRPF8Q6P2Q9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.033e-10■□□□□ 10.1
PRPF8Q6P2Q9 TMEM177-206ENST00000496203 881 ntTSL 1 (best)14.72□□□□□ -0.053e-10■□□□□ 10.1
PRPF8Q6P2Q9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.133e-10■□□□□ 10.1
PRPF8Q6P2Q9 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.54□□□□□ -0.43e-10■□□□□ 10.1
PRPF8Q6P2Q9 TMEM177-205ENST00000445518 791 ntTSL 212.27□□□□□ -0.443e-10■□□□□ 10.1
PRPF8Q6P2Q9 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.493e-10■□□□□ 10.1
PRPF8Q6P2Q9 MBD3-203ENST00000585903 415 ntTSL 59.3□□□□□ -0.929e-11■□□□□ 10.1
PRPF8Q6P2Q9 HDAC10-210ENST00000475965 1239 ntTSL 1 (best)16.04■□□□□ 0.164e-9■□□□□ 10.1
PRPF8Q6P2Q9 NUBP2-205ENST00000564227 903 ntTSL 319.45■□□□□ 0.73e-6■□□□□ 10.1
PRPF8Q6P2Q9 NUBP2-209ENST00000566090 708 ntTSL 217.85■□□□□ 0.453e-6■□□□□ 10.1
PRPF8Q6P2Q9 NUBP2-212ENST00000568287 839 ntTSL 517.02■□□□□ 0.323e-6■□□□□ 10.1
PRPF8Q6P2Q9 NUBP2-210ENST00000566447 511 ntTSL 415.77■□□□□ 0.123e-6■□□□□ 10.1
PRPF8Q6P2Q9 NUBP2-204ENST00000563821 2235 nt14.92□□□□□ -0.023e-6■□□□□ 10.1
PRPF8Q6P2Q9 NUBP2-203ENST00000563136 470 ntTSL 413.12□□□□□ -0.313e-6■□□□□ 10.1
PRPF8Q6P2Q9 IGDCC3-203ENST00000559058 564 ntTSL 520.64■□□□□ 0.895e-13■□□□□ 10.1
PRPF8Q6P2Q9 MIB2-205ENST00000464570 968 ntTSL 320.21■□□□□ 0.832e-8■□□□□ 10.1
PRPF8Q6P2Q9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.19■□□□□ 0.342e-6■□□□□ 10.1
PRPF8Q6P2Q9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -02e-6■□□□□ 10.1
PRPF8Q6P2Q9 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.692e-6■□□□□ 10.1
PRPF8Q6P2Q9 NR2C2-205ENST00000413194 551 ntTSL 35.5□□□□□ -1.533e-7■□□□□ 10.1
PRPF8Q6P2Q9 FGA-203ENST00000622532 1130 ntTSL 5 BASIC8.29□□□□□ -1.085e-8■□□□□ 10.1
PRPF8Q6P2Q9 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC6.94□□□□□ -1.35e-8■□□□□ 10.1
PRPF8Q6P2Q9 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.555e-8■□□□□ 10.1
PRPF8Q6P2Q9 RNF10-221ENST00000544124 448 ntTSL 28.48□□□□□ -1.054e-8■□□□□ 10.1
PRPF8Q6P2Q9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.25■□□□□ 0.031e-6■□□□□ 10.1
PRPF8Q6P2Q9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.25□□□□□ -0.291e-6■□□□□ 10.1
PRPF8Q6P2Q9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.66□□□□□ -0.381e-6■□□□□ 10.1
PRPF8Q6P2Q9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.381e-6■□□□□ 10.1
PRPF8Q6P2Q9 TOM1L1-214ENST00000572576 754 ntTSL 511.18□□□□□ -0.621e-6■□□□□ 10.1
PRPF8Q6P2Q9 TOM1L1-213ENST00000572405 2337 ntTSL 2 BASIC9.6□□□□□ -0.871e-6■□□□□ 10.1
PRPF8Q6P2Q9 TOM1L1-223ENST00000576932 1252 ntTSL 1 (best)8.41□□□□□ -1.061e-6■□□□□ 10.1
PRPF8Q6P2Q9 TOM1L1-210ENST00000572158 1521 ntAPPRIS ALT1 TSL 2 BASIC8.01□□□□□ -1.131e-6■□□□□ 10.1
PRPF8Q6P2Q9 TOM1L1-209ENST00000571319 1524 ntTSL 26.85□□□□□ -1.311e-6■□□□□ 10.1
PRPF8Q6P2Q9 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC6.43□□□□□ -1.381e-6■□□□□ 10.1
PRPF8Q6P2Q9 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC4.95□□□□□ -1.621e-6■□□□□ 10.1
PRPF8Q6P2Q9 TOM1L1-205ENST00000570499 596 ntTSL 32.57□□□□□ -21e-6■□□□□ 10.1
PRPF8Q6P2Q9 TOM1L1-207ENST00000570965 1026 ntTSL 51.58□□□□□ -2.161e-6■□□□□ 10.1
PRPF8Q6P2Q9 PLA2G6-207ENST00000427114 688 ntTSL 311.32□□□□□ -0.64e-10■□□□□ 10.1
PRPF8Q6P2Q9 PLA2G6-223ENST00000480154 323 ntTSL 38.99□□□□□ -0.974e-10■□□□□ 10.1
PRPF8Q6P2Q9 ARID1A-211ENST00000636110 3450 nt7.18□□□□□ -1.261e-8■□□□□ 10.1
PRPF8Q6P2Q9 SRPK2-212ENST00000482897 715 ntTSL 518.04■□□□□ 0.484e-6■□□□□ 10.1
PRPF8Q6P2Q9 VILL-210ENST00000488209 543 ntTSL 216.39■□□□□ 0.211e-6■□□□□ 10.1
PRPF8Q6P2Q9 VILL-209ENST00000486616 4439 ntTSL 212.18□□□□□ -0.461e-6■□□□□ 10.1
PRPF8Q6P2Q9 SRPK2-203ENST00000460391 666 ntTSL 211.47□□□□□ -0.574e-6■□□□□ 10.1
PRPF8Q6P2Q9 SRPK2-209ENST00000476117 703 ntTSL 27.87□□□□□ -1.154e-6■□□□□ 10.1
PRPF8Q6P2Q9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.023e-8■□□□□ 10.1
PRPF8Q6P2Q9 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.323e-8■□□□□ 10.1
PRPF8Q6P2Q9 RCN1-206ENST00000530348 527 ntTSL 48.75□□□□□ -1.013e-8■□□□□ 10.1
PRPF8Q6P2Q9 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.342e-6■□□□□ 10.1
PRPF8Q6P2Q9 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.67□□□□□ -0.542e-6■□□□□ 10.1
PRPF8Q6P2Q9 BCL9L-204ENST00000530293 445 ntTSL 57.94□□□□□ -1.142e-6■□□□□ 10.1
PRPF8Q6P2Q9 MTPN-202ENST00000435723 879 ntTSL 1 (best) BASIC8.07□□□□□ -1.121e-7■□□□□ 10.1
PRPF8Q6P2Q9 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.361e-7■□□□□ 10.1
PRPF8Q6P2Q9 MLXIP-211ENST00000542417 513 ntTSL 212.31□□□□□ -0.445e-8■□□□□ 10.1
PRPF8Q6P2Q9 MLXIP-202ENST00000366272 1682 ntTSL 311.75□□□□□ -0.535e-8■□□□□ 10.1
PRPF8Q6P2Q9 GART-213ENST00000467575 922 ntTSL 34.81□□□□□ -1.646e-7■□□□□ 10.1
PRPF8Q6P2Q9 PGGHG-201ENST00000397660 578 ntTSL 514.36□□□□□ -0.111e-7■□□□□ 10
PRPF8Q6P2Q9 RELN-207ENST00000478148 612 ntTSL 36.3□□□□□ -1.49e-30■□□□□ 10
PRPF8Q6P2Q9 PLIN3-206ENST00000589494 629 ntTSL 515.57■□□□□ 0.089e-8■□□□□ 10
PRPF8Q6P2Q9 PLIN3-204ENST00000589034 574 ntTSL 515.39■□□□□ 0.059e-8■□□□□ 10
PRPF8Q6P2Q9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.49e-8■□□□□ 10
PRPF8Q6P2Q9 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.01□□□□□ -0.659e-8■□□□□ 10
PRPF8Q6P2Q9 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.819e-8■□□□□ 10
PRPF8Q6P2Q9 ALOX5-204ENST00000483623 363 ntTSL 58.15□□□□□ -1.19e-8■□□□□ 10
PRPF8Q6P2Q9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.12■□□□□ 0.653e-8■□□□□ 10
PRPF8Q6P2Q9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.453e-8■□□□□ 10
PRPF8Q6P2Q9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.273e-8■□□□□ 10
PRPF8Q6P2Q9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.14□□□□□ -0.313e-8■□□□□ 10
PRPF8Q6P2Q9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.52□□□□□ -0.43e-8■□□□□ 10
Retrieved 100 of 73,762 protein–RNA pairs in 538.4 ms