RNA–Protein interactions for RNA: ENST00000445275.6

TOM1L1-202, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-202ENST00000445275 NISCHQ9Y2I1 1504 aa43.39■■■■■ 4.54
TOM1L1-202ENST00000445275 CCDC180Q9P1Z9 1646 aa37.61■■■■□ 3.61
TOM1L1-202ENST00000445275 ZCCHC6Q5VYS8 1495 aaKnown RBP36.52■■■■□ 3.44
TOM1L1-202ENST00000445275 DCAF1Q9Y4B6 1507 aa35.8■■■■□ 3.32
TOM1L1-202ENST00000445275 DCAF8L2P0C7V8 631 aa35.77■■■■□ 3.32
TOM1L1-202ENST00000445275 SHROOM4Q9ULL8 1493 aa35.77■■■■□ 3.32
TOM1L1-202ENST00000445275 ABCC9O60706 1549 aa35.36■■■■□ 3.25
TOM1L1-202ENST00000445275 MYO15BQ96JP2 1530 aa35.2■■■■□ 3.23
TOM1L1-202ENST00000445275 NACADO15069 1562 aa34.94■■■■□ 3.18
TOM1L1-202ENST00000445275 SCRIBQ14160 1630 aa34.75■■■■□ 3.15
TOM1L1-202ENST00000445275 RB1CC1Q8TDY2 1594 aa34.56■■■■□ 3.12
TOM1L1-202ENST00000445275 SUPT5HO00267 1087 aaKnown RBP34.55■■■■□ 3.12
TOM1L1-202ENST00000445275 UNC13AQ9UPW8 1703 aa34.02■■■■□ 3.04
TOM1L1-202ENST00000445275 RSF1Q96T23 1441 aaPredicted RBP33.82■■■■□ 3.01
TOM1L1-202ENST00000445275 CECR2Q9BXF3 1484 aa33.77■■■■□ 3
TOM1L1-202ENST00000445275 BICRAQ9NZM4 1560 aa33.62■■■□□ 2.97
TOM1L1-202ENST00000445275 MROH2BQ7Z745 1585 aa33.59■■■□□ 2.97
TOM1L1-202ENST00000445275 PABPN1Q86U42 306 aaKnown RBP eCLIP33.45■■■□□ 2.95
TOM1L1-202ENST00000445275 BAZ1AQ9NRL2 1556 aaPredicted RBP33.43■■■□□ 2.94
TOM1L1-202ENST00000445275 WIZO95785 1651 aa33.36■■■□□ 2.93
TOM1L1-202ENST00000445275 SMARCA4P51532 1647 aa33.29■■■□□ 2.92
TOM1L1-202ENST00000445275 CHIC1Q5VXU3 224 aa33.25■■■□□ 2.91
TOM1L1-202ENST00000445275 TOP2AP11388 1531 aaKnown RBP32.94■■■□□ 2.86
TOM1L1-202ENST00000445275 PEG3Q9GZU2 1588 aa32.82■■■□□ 2.84
TOM1L1-202ENST00000445275 SMARCA2P51531 1590 aa32.69■■■□□ 2.82
TOM1L1-202ENST00000445275 CCDC88BA6NC98 1476 aa32.66■■■□□ 2.82
TOM1L1-202ENST00000445275 ATAD2BQ9ULI0 1458 aa32.65■■■□□ 2.82
TOM1L1-202ENST00000445275 EIF4G1Q04637 1599 aaKnown RBP32.59■■■□□ 2.81
TOM1L1-202ENST00000445275 BAZ1BQ9UIG0 1483 aaKnown RBP32.46■■■□□ 2.79
TOM1L1-202ENST00000445275 TRIM41Q8WV44 630 aa32.39■■■□□ 2.78
TOM1L1-202ENST00000445275 NCAPD3P42695 1498 aa32.26■■■□□ 2.76
TOM1L1-202ENST00000445275 HMGXB3Q12766 1538 aa32.23■■■□□ 2.75
TOM1L1-202ENST00000445275 ABCC8Q09428 1581 aa32.13■■■□□ 2.73
TOM1L1-202ENST00000445275 LOC105371045A0A1W2PR82 267 aa32.07■■■□□ 2.72
TOM1L1-202ENST00000445275 CC2D2AQ9P2K1 1620 aa31.99■■■□□ 2.71
TOM1L1-202ENST00000445275 FAM9AQ8IZU1 332 aaPredicted RBP31.91■■■□□ 2.7
TOM1L1-202ENST00000445275 WRNQ14191 1432 aaPredicted RBP eCLIP31.79■■■□□ 2.68
TOM1L1-202ENST00000445275 SYNJ1O43426 1573 aa31.72■■■□□ 2.67
TOM1L1-202ENST00000445275 CFTRP13569 1480 aa31.66■■■□□ 2.66
TOM1L1-202ENST00000445275 SOGA1O94964 1423 aa31.59■■■□□ 2.65
TOM1L1-202ENST00000445275 PRDM2Q13029 1718 aa31.54■■■□□ 2.64
TOM1L1-202ENST00000445275 EHMT2Q96KQ7 1210 aa31.51■■■□□ 2.63
TOM1L1-202ENST00000445275 TOP2BQ02880 1626 aa31.5■■■□□ 2.63
TOM1L1-202ENST00000445275 RUSC2Q8N2Y8 1516 aa31.5■■■□□ 2.63
TOM1L1-202ENST00000445275 BIVM-ERCC5R4GMW8 1640 aa31.47■■■□□ 2.63
TOM1L1-202ENST00000445275 CADPSQ9ULU8 1353 aa31.47■■■□□ 2.63
TOM1L1-202ENST00000445275 EEA1Q15075 1411 aa31.44■■■□□ 2.62
TOM1L1-202ENST00000445275 CUX1P39880 1505 aa31.38■■■□□ 2.61
TOM1L1-202ENST00000445275 CSRNP3Q8WYN3 585 aa31.32■■■□□ 2.6
TOM1L1-202ENST00000445275 DNAJC5BQ9UF47 199 aa31.21■■■□□ 2.59
TOM1L1-202ENST00000445275 NESP48681 1621 aa31.19■■■□□ 2.58
TOM1L1-202ENST00000445275 FANCD2Q9BXW9 1451 aa31.15■■■□□ 2.58
TOM1L1-202ENST00000445275 KIF21BO75037 1637 aa31.1■■■□□ 2.57
TOM1L1-202ENST00000445275 LAMC3Q9Y6N6 1575 aa31.09■■■□□ 2.57
TOM1L1-202ENST00000445275 GOLGA3Q08378 1498 aa31.09■■■□□ 2.57
TOM1L1-202ENST00000445275 TNIKQ9UKE5 1360 aa31.07■■■□□ 2.56
TOM1L1-202ENST00000445275 CEP164Q9UPV0 1460 aa31.05■■■□□ 2.56
TOM1L1-202ENST00000445275 CEP162Q5TB80 1403 aa30.96■■■□□ 2.55
TOM1L1-202ENST00000445275 UBTFP17480 764 aaKnown RBP30.96■■■□□ 2.55
TOM1L1-202ENST00000445275 FGD5Q6ZNL6 1462 aa30.95■■■□□ 2.55
TOM1L1-202ENST00000445275 DNMBPQ6XZF7 1577 aa30.93■■■□□ 2.54
TOM1L1-202ENST00000445275 KIF27Q86VH2 1401 aa30.93■■■□□ 2.54
TOM1L1-202ENST00000445275 PCGF6Q9BYE7 350 aa30.92■■■□□ 2.54
TOM1L1-202ENST00000445275 RAPGEF2Q9Y4G8 1499 aa30.91■■■□□ 2.54
TOM1L1-202ENST00000445275 TOPBP1Q92547 1522 aa30.87■■■□□ 2.53
TOM1L1-202ENST00000445275 PRXQ9BXM0 1461 aa30.85■■■□□ 2.53
TOM1L1-202ENST00000445275 PDS5BQ9NTI5 1447 aa30.82■■■□□ 2.53
TOM1L1-202ENST00000445275 CUX2O14529 1486 aa30.82■■■□□ 2.52
TOM1L1-202ENST00000445275 KIF21AQ7Z4S6 1674 aa30.8■■■□□ 2.52
TOM1L1-202ENST00000445275 ERICH3Q5RHP9 1530 aa30.8■■■□□ 2.52
TOM1L1-202ENST00000445275 URB2Q14146 1524 aaKnown RBP30.79■■■□□ 2.52
TOM1L1-202ENST00000445275 TRIM26Q12899 539 aaPredicted RBP30.75■■■□□ 2.51
TOM1L1-202ENST00000445275 POLA1P09884 1462 aaPredicted RBP30.75■■■□□ 2.51
TOM1L1-202ENST00000445275 RAD54L2Q9Y4B4 1467 aa30.71■■■□□ 2.51
TOM1L1-202ENST00000445275 IGF1RP08069 1367 aa30.67■■■□□ 2.5
TOM1L1-202ENST00000445275 ABCA10Q8WWZ4 1543 aa30.65■■■□□ 2.5
TOM1L1-202ENST00000445275 CLIP1P30622 1438 aa30.63■■■□□ 2.49
TOM1L1-202ENST00000445275 WDR97A6NE52 1622 aa30.57■■■□□ 2.48
TOM1L1-202ENST00000445275 PPARGC1BQ86YN6 1023 aaKnown RBP30.57■■■□□ 2.48
TOM1L1-202ENST00000445275 CARMIL1Q5VZK9 1371 aa30.5■■■□□ 2.47
TOM1L1-202ENST00000445275 MRC2Q9UBG0 1479 aa30.45■■■□□ 2.46
TOM1L1-202ENST00000445275 RANGAP1P46060 587 aaPredicted RBP30.45■■■□□ 2.46
TOM1L1-202ENST00000445275 ABCA5Q8WWZ7 1642 aa30.41■■■□□ 2.46
TOM1L1-202ENST00000445275 VPS8Q8N3P4 1428 aa30.4■■■□□ 2.46
TOM1L1-202ENST00000445275 TARBP1Q13395 1621 aaKnown RBP30.4■■■□□ 2.46
TOM1L1-202ENST00000445275 TDRD9Q8NDG6 1382 aaKnown RBP30.35■■■□□ 2.45
TOM1L1-202ENST00000445275 CUL7Q14999 1698 aa30.35■■■□□ 2.45
TOM1L1-202ENST00000445275 ARAP1Q96P48 1450 aa30.33■■■□□ 2.45
TOM1L1-202ENST00000445275 GAPVD1Q14C86 1478 aa30.3■■■□□ 2.44
TOM1L1-202ENST00000445275 HRCP23327 699 aa30.3■■■□□ 2.44
TOM1L1-202ENST00000445275 WDR62O43379 1518 aa30.29■■■□□ 2.44
TOM1L1-202ENST00000445275 ARHGAP35Q9NRY4 1499 aa30.25■■■□□ 2.43
TOM1L1-202ENST00000445275 TTBK1Q5TCY1 1321 aaPredicted RBP30.23■■■□□ 2.43
TOM1L1-202ENST00000445275 ERCC6Q03468 1493 aa30.2■■■□□ 2.43
TOM1L1-202ENST00000445275 THOC2Q8NI27 1593 aaKnown RBP30.16■■■□□ 2.42
TOM1L1-202ENST00000445275 PBRM1Q86U86 1689 aa30.15■■■□□ 2.42
TOM1L1-202ENST00000445275 CTTNBP2Q8WZ74 1663 aa30.12■■■□□ 2.41
TOM1L1-202ENST00000445275 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
TOM1L1-202ENST00000445275 AQRO60306 1485 aaKnown RBP eCLIP30.1■■■□□ 2.41
TOM1L1-202ENST00000445275 ZNF608Q9ULD9 1512 aaPredicted RBP30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 1096.1 ms