RNA–Protein interactions for RNA: ENST00000570499.5

TOM1L1-205, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-205ENST00000570499 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
TOM1L1-205ENST00000570499 CHIC1Q5VXU3 224 aa17.94■□□□□ 0.46
TOM1L1-205ENST00000570499 SENP3Q9H4L4 574 aaPredicted RBP16.45■□□□□ 0.22
TOM1L1-205ENST00000570499 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
TOM1L1-205ENST00000570499 FOXD1Q16676 465 aa15.29■□□□□ 0.04
TOM1L1-205ENST00000570499 POTEDQ86YR6 584 aa15.04■□□□□ -0
TOM1L1-205ENST00000570499 MSH5O43196 834 aa14.65□□□□□ -0.06
TOM1L1-205ENST00000570499 PIAS4Q8N2W9 510 aaPredicted RBP14.24□□□□□ -0.13
TOM1L1-205ENST00000570499 PLPPR3Q6T4P5 718 aa13.94□□□□□ -0.18
TOM1L1-205ENST00000570499 PPP6R1Q9UPN7 881 aa13.85□□□□□ -0.19
TOM1L1-205ENST00000570499 ADRA2BP18089 450 aa13.82□□□□□ -0.2
TOM1L1-205ENST00000570499 DMRT2Q9Y5R5 561 aa12.92□□□□□ -0.34
TOM1L1-205ENST00000570499 CACNB1Q02641 598 aaPredicted RBP12.87□□□□□ -0.35
TOM1L1-205ENST00000570499 SCAF1Q9H7N4 1312 aaKnown RBP12.86□□□□□ -0.35
TOM1L1-205ENST00000570499 MAPK8IP2Q13387 824 aaPredicted RBP12.83□□□□□ -0.36
TOM1L1-205ENST00000570499 DCAF8L1A6NGE4 600 aa12.5□□□□□ -0.41
TOM1L1-205ENST00000570499 RNF39Q9H2S5 420 aa12.35□□□□□ -0.43
TOM1L1-205ENST00000570499 HOXD11P31277 338 aaPredicted RBP12.23□□□□□ -0.45
TOM1L1-205ENST00000570499 C1QBPQ07021 282 aaKnown RBP12.23□□□□□ -0.45
TOM1L1-205ENST00000570499 PPP4R3CPQ6ZMV5 832 aa12.1□□□□□ -0.47
TOM1L1-205ENST00000570499 RNF216Q9NWF9 866 aaPredicted RBP12.05□□□□□ -0.48
TOM1L1-205ENST00000570499 CNKSR2Q8WXI2 1034 aa12.04□□□□□ -0.48
TOM1L1-205ENST00000570499 DNAJC5BQ9UF47 199 aa11.99□□□□□ -0.49
TOM1L1-205ENST00000570499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.75□□□□□ -0.539e-8■□□□□ 10.2
TOM1L1-205ENST00000570499 POTEHQ6S545 545 aa11.73□□□□□ -0.53
TOM1L1-205ENST00000570499 NCBP3Q53F19 620 aaKnown RBP11.61□□□□□ -0.55
TOM1L1-205ENST00000570499 CAPN15O75808 1086 aa11.42□□□□□ -0.58
TOM1L1-205ENST00000570499 DSG3P32926 999 aa11.4□□□□□ -0.58
TOM1L1-205ENST00000570499 NPM3O75607 178 aaKnown RBP11.38□□□□□ -0.59
TOM1L1-205ENST00000570499 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
TOM1L1-205ENST00000570499 SPINK5Q9NQ38 1064 aaPredicted RBP11.3□□□□□ -0.6
TOM1L1-205ENST00000570499 APLP2Q06481 763 aa11.19□□□□□ -0.62
TOM1L1-205ENST00000570499 KCNA4P22459 653 aa11.14□□□□□ -0.63
TOM1L1-205ENST00000570499 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
TOM1L1-205ENST00000570499 ZNF219Q9P2Y4 722 aaPredicted RBP11.1□□□□□ -0.63
TOM1L1-205ENST00000570499 ABCB7O75027 752 aa11.04□□□□□ -0.64
TOM1L1-205ENST00000570499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.02□□□□□ -0.65
TOM1L1-205ENST00000570499 HNRNPUL2Q1KMD3 747 aaKnown RBP11.02□□□□□ -0.65
TOM1L1-205ENST00000570499 RBM42Q9BTD8 480 aaKnown RBP11.02□□□□□ -0.65
TOM1L1-205ENST00000570499 CHRDL2Q6WN34 429 aa10.9□□□□□ -0.66
TOM1L1-205ENST00000570499 SLC4A2P04920 1241 aa10.88□□□□□ -0.67
TOM1L1-205ENST00000570499 SAMD1Q6SPF0 538 aaPredicted RBP10.88□□□□□ -0.67
TOM1L1-205ENST00000570499 SP7Q8TDD2 431 aaPredicted RBP10.77□□□□□ -0.69
TOM1L1-205ENST00000570499 POLA2Q14181 598 aa10.68□□□□□ -0.7
TOM1L1-205ENST00000570499 AKT1S1Q96B36 256 aa10.61□□□□□ -0.71
TOM1L1-205ENST00000570499 HAX1O00165 279 aa10.53□□□□□ -0.72
TOM1L1-205ENST00000570499 MYCNP04198 464 aaPredicted RBP10.52□□□□□ -0.73
TOM1L1-205ENST00000570499 ZBTB12Q9Y330 459 aaPredicted RBP10.52□□□□□ -0.73
TOM1L1-205ENST00000570499 SLC4A1APQ9BWU0 796 aaKnown RBP10.5□□□□□ -0.73
TOM1L1-205ENST00000570499 PIP4P2Q8N4L2 257 aa10.49□□□□□ -0.73
TOM1L1-205ENST00000570499 REM2Q8IYK8 340 aaPredicted RBP10.46□□□□□ -0.73
TOM1L1-205ENST00000570499 FOXD4L1Q9NU39 408 aa10.4□□□□□ -0.74
TOM1L1-205ENST00000570499 FXR2P51116 673 aaKnown RBP eCLIP10.36□□□□□ -0.75
TOM1L1-205ENST00000570499 PITPNM1O00562 1244 aa10.33□□□□□ -0.76
TOM1L1-205ENST00000570499 OSCARQ8IYS5 282 aa10.3□□□□□ -0.76
TOM1L1-205ENST00000570499 ATF5Q9Y2D1 282 aaPredicted RBP10.3□□□□□ -0.76
TOM1L1-205ENST00000570499 ZBTB22O15209 634 aa10.25□□□□□ -0.77
TOM1L1-205ENST00000570499 EVX2Q03828 476 aa10.19□□□□□ -0.78
TOM1L1-205ENST00000570499 LHX8Q68G74 356 aa10.11□□□□□ -0.79
TOM1L1-205ENST00000570499 PRKAR2AP13861 404 aaKnown RBP10.1□□□□□ -0.79
TOM1L1-205ENST00000570499 SPDYE2BA6NHP3 402 aa10.08□□□□□ -0.8
TOM1L1-205ENST00000570499 SPDYE6P0CI01 402 aa10.08□□□□□ -0.8
TOM1L1-205ENST00000570499 SPDYE2Q495Y8 402 aa10.08□□□□□ -0.8
TOM1L1-205ENST00000570499 ATXN8OSP0DMR3 200 aa10.07□□□□□ -0.8
TOM1L1-205ENST00000570499 SPDYE1Q8NFV5 336 aaPredicted RBP10.06□□□□□ -0.8
TOM1L1-205ENST00000570499 CLEC11AQ9Y240 323 aa10.05□□□□□ -0.8
TOM1L1-205ENST00000570499 C19orf67A6NJJ6 358 aa10.04□□□□□ -0.8
TOM1L1-205ENST00000570499 GABBR2O75899 941 aa10.03□□□□□ -0.8
TOM1L1-205ENST00000570499 FBLN2P98095 1184 aa10.03□□□□□ -0.8
TOM1L1-205ENST00000570499 PLSCR2Q9NRY7 297 aa9.91□□□□□ -0.82
TOM1L1-205ENST00000570499 ZNF692Q9BU19 519 aaPredicted RBP9.9□□□□□ -0.82
TOM1L1-205ENST00000570499 CLCN6P51797 869 aa9.85□□□□□ -0.83
TOM1L1-205ENST00000570499 PRR29P0C7W0 189 aa9.84□□□□□ -0.83
TOM1L1-205ENST00000570499 MKRN4PQ13434 485 aaPredicted RBP9.82□□□□□ -0.84
TOM1L1-205ENST00000570499 CHADLQ6NUI6 762 aa9.82□□□□□ -0.84
TOM1L1-205ENST00000570499 SSUH2Q9Y2M2 353 aa9.81□□□□□ -0.84
TOM1L1-205ENST00000570499 CD44P16070 742 aaKnown RBP9.75□□□□□ -0.85
TOM1L1-205ENST00000570499 DCBLD2Q96PD2 775 aa9.75□□□□□ -0.85
TOM1L1-205ENST00000570499 CSRNP3Q8WYN3 585 aa9.73□□□□□ -0.85
TOM1L1-205ENST00000570499 POTEIP0CG38 1075 aa9.72□□□□□ -0.85
TOM1L1-205ENST00000570499 PABPN1Q86U42 306 aaKnown RBP eCLIP9.69□□□□□ -0.86
TOM1L1-205ENST00000570499 FARP1Q9Y4F1 1045 aaPredicted RBP9.68□□□□□ -0.86
TOM1L1-205ENST00000570499 EHMT2Q96KQ7 1210 aa9.61□□□□□ -0.87
TOM1L1-205ENST00000570499 ZNF579Q8NAF0 562 aaKnown RBP9.56□□□□□ -0.88
TOM1L1-205ENST00000570499 ZRANB1Q9UGI0 708 aa9.55□□□□□ -0.88
TOM1L1-205ENST00000570499 POTEMA6NI47 508 aa9.53□□□□□ -0.88
TOM1L1-205ENST00000570499 PCDH10Q9P2E7 1040 aa9.53□□□□□ -0.88
TOM1L1-205ENST00000570499 OTUD5Q96G74 571 aa9.51□□□□□ -0.89
TOM1L1-205ENST00000570499 POTEGQ6S5H5 508 aa9.48□□□□□ -0.89
TOM1L1-205ENST00000570499 PAK3O75914 559 aaPredicted RBP9.47□□□□□ -0.89
TOM1L1-205ENST00000570499 GALR2O43603 387 aaPredicted RBP9.43□□□□□ -0.9
TOM1L1-205ENST00000570499 STAG3Q9UJ98 1225 aa9.42□□□□□ -0.9
TOM1L1-205ENST00000570499 POTEB2H3BUK9 544 aa9.38□□□□□ -0.91
TOM1L1-205ENST00000570499 MAMSTRQ6ZN01 415 aa9.37□□□□□ -0.91
TOM1L1-205ENST00000570499 CREBZFQ9NS37 354 aa9.36□□□□□ -0.91
TOM1L1-205ENST00000570499 SPDYE4A6NLX3 237 aa9.33□□□□□ -0.92
TOM1L1-205ENST00000570499 NPM1P06748 294 aaKnown RBP eCLIP9.33□□□□□ -0.92
TOM1L1-205ENST00000570499 C7P10643 843 aa9.31□□□□□ -0.92
TOM1L1-205ENST00000570499 SLC39A7Q92504 469 aa9.3□□□□□ -0.92
TOM1L1-205ENST00000570499 PHF12Q96QT6 1004 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms