RNA–Protein interactions for RNA: ENST00000533350.1

PICALM-221, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 3

Gene PICALM, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-221ENST00000533350 AEBP2Q6ZN18 517 aaPredicted RBP23.48■■□□□ 1.35
PICALM-221ENST00000533350 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
PICALM-221ENST00000533350 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
PICALM-221ENST00000533350 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
PICALM-221ENST00000533350 FOXD1Q16676 465 aa18.83■□□□□ 0.6
PICALM-221ENST00000533350 POTEDQ86YR6 584 aa18.38■□□□□ 0.53
PICALM-221ENST00000533350 MSH5O43196 834 aa17.84■□□□□ 0.45
PICALM-221ENST00000533350 PIAS4Q8N2W9 510 aaPredicted RBP17.43■□□□□ 0.38
PICALM-221ENST00000533350 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
PICALM-221ENST00000533350 PLPPR3Q6T4P5 718 aa17.13■□□□□ 0.33
PICALM-221ENST00000533350 ADRA2BP18089 450 aa17.08■□□□□ 0.32
PICALM-221ENST00000533350 MAPK8IP2Q13387 824 aaPredicted RBP15.88■□□□□ 0.13
PICALM-221ENST00000533350 DMRT2Q9Y5R5 561 aa15.87■□□□□ 0.13
PICALM-221ENST00000533350 SCAF1Q9H7N4 1312 aaKnown RBP15.67■□□□□ 0.1
PICALM-221ENST00000533350 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
PICALM-221ENST00000533350 DCAF8L1A6NGE4 600 aa15.24■□□□□ 0.03
PICALM-221ENST00000533350 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
PICALM-221ENST00000533350 HOXD11P31277 338 aaPredicted RBP15.07■□□□□ 0
PICALM-221ENST00000533350 PPP4R3CPQ6ZMV5 832 aa14.94□□□□□ -0.02
PICALM-221ENST00000533350 C1QBPQ07021 282 aaKnown RBP14.93□□□□□ -0.02
PICALM-221ENST00000533350 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
PICALM-221ENST00000533350 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
PICALM-221ENST00000533350 DNAJC5BQ9UF47 199 aa14.69□□□□□ -0.06
PICALM-221ENST00000533350 KCNA4P22459 653 aa14.65□□□□□ -0.06
PICALM-221ENST00000533350 NCBP3Q53F19 620 aaKnown RBP14.47□□□□□ -0.09
PICALM-221ENST00000533350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.36□□□□□ -0.114e-9■□□□□ 9.3
PICALM-221ENST00000533350 POTEHQ6S545 545 aa14.29□□□□□ -0.12
PICALM-221ENST00000533350 NPM3O75607 178 aaKnown RBP14.14□□□□□ -0.15
PICALM-221ENST00000533350 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
PICALM-221ENST00000533350 SLC4A1APQ9BWU0 796 aaKnown RBP14.08□□□□□ -0.16
PICALM-221ENST00000533350 DSG3P32926 999 aa14.02□□□□□ -0.17
PICALM-221ENST00000533350 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
PICALM-221ENST00000533350 CAPN15O75808 1086 aa13.95□□□□□ -0.18
PICALM-221ENST00000533350 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
PICALM-221ENST00000533350 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
PICALM-221ENST00000533350 TRHP20396 242 aaPredicted RBP13.6□□□□□ -0.23
PICALM-221ENST00000533350 ABCB7O75027 752 aa13.56□□□□□ -0.24
PICALM-221ENST00000533350 ZNF219Q9P2Y4 722 aaPredicted RBP13.55□□□□□ -0.24
PICALM-221ENST00000533350 APLP2Q06481 763 aa13.54□□□□□ -0.24
PICALM-221ENST00000533350 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
PICALM-221ENST00000533350 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
PICALM-221ENST00000533350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.41□□□□□ -0.26
PICALM-221ENST00000533350 ZBTB22O15209 634 aa13.41□□□□□ -0.26
PICALM-221ENST00000533350 HNRNPUL2Q1KMD3 747 aaKnown RBP13.41□□□□□ -0.26
PICALM-221ENST00000533350 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
PICALM-221ENST00000533350 CHRDL2Q6WN34 429 aa13.31□□□□□ -0.28
PICALM-221ENST00000533350 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
PICALM-221ENST00000533350 POLA2Q14181 598 aa13.13□□□□□ -0.31
PICALM-221ENST00000533350 SP7Q8TDD2 431 aaPredicted RBP13.13□□□□□ -0.31
PICALM-221ENST00000533350 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
PICALM-221ENST00000533350 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
PICALM-221ENST00000533350 ATXN8OSP0DMR3 200 aa12.91□□□□□ -0.34
PICALM-221ENST00000533350 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
PICALM-221ENST00000533350 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
PICALM-221ENST00000533350 HAX1O00165 279 aa12.82□□□□□ -0.36
PICALM-221ENST00000533350 ZBTB12Q9Y330 459 aaPredicted RBP12.79□□□□□ -0.36
PICALM-221ENST00000533350 FXR2P51116 673 aaKnown RBP eCLIP12.73□□□□□ -0.37
PICALM-221ENST00000533350 ATF5Q9Y2D1 282 aaPredicted RBP12.7□□□□□ -0.38
PICALM-221ENST00000533350 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
PICALM-221ENST00000533350 OSCARQ8IYS5 282 aa12.67□□□□□ -0.38
PICALM-221ENST00000533350 EVX2Q03828 476 aa12.61□□□□□ -0.39
PICALM-221ENST00000533350 FKBP8Q14318 412 aa12.42□□□□□ -0.42
PICALM-221ENST00000533350 PRKAR2AP13861 404 aaKnown RBP12.37□□□□□ -0.43
PICALM-221ENST00000533350 SPDYE2BA6NHP3 402 aa12.35□□□□□ -0.43
PICALM-221ENST00000533350 SPDYE6P0CI01 402 aa12.35□□□□□ -0.43
PICALM-221ENST00000533350 SPDYE2Q495Y8 402 aa12.35□□□□□ -0.43
PICALM-221ENST00000533350 C19orf67A6NJJ6 358 aa12.33□□□□□ -0.44
PICALM-221ENST00000533350 LHX8Q68G74 356 aa12.33□□□□□ -0.44
PICALM-221ENST00000533350 GABBR2O75899 941 aa12.3□□□□□ -0.44
PICALM-221ENST00000533350 CLEC11AQ9Y240 323 aa12.29□□□□□ -0.44
PICALM-221ENST00000533350 FBLN2P98095 1184 aa12.28□□□□□ -0.44
PICALM-221ENST00000533350 SPDYE1Q8NFV5 336 aaPredicted RBP12.28□□□□□ -0.44
PICALM-221ENST00000533350 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
PICALM-221ENST00000533350 SSUH2Q9Y2M2 353 aa12.11□□□□□ -0.47
PICALM-221ENST00000533350 SPDYE4A6NLX3 237 aa12.1□□□□□ -0.47
PICALM-221ENST00000533350 CHADLQ6NUI6 762 aa12.1□□□□□ -0.47
PICALM-221ENST00000533350 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
PICALM-221ENST00000533350 POTEIP0CG38 1075 aa12.03□□□□□ -0.48
PICALM-221ENST00000533350 PRR29P0C7W0 189 aa12.02□□□□□ -0.49
PICALM-221ENST00000533350 PLSCR2Q9NRY7 297 aa11.98□□□□□ -0.49
PICALM-221ENST00000533350 CLCN6P51797 869 aa11.95□□□□□ -0.5
PICALM-221ENST00000533350 CD44P16070 742 aaKnown RBP11.93□□□□□ -0.5
PICALM-221ENST00000533350 FBXO3Q9UK99 471 aa11.93□□□□□ -0.5
PICALM-221ENST00000533350 PABPN1Q86U42 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
PICALM-221ENST00000533350 FARP1Q9Y4F1 1045 aaPredicted RBP11.88□□□□□ -0.51
PICALM-221ENST00000533350 AMER1Q5JTC6 1135 aaPredicted RBP11.87□□□□□ -0.51
PICALM-221ENST00000533350 DCBLD2Q96PD2 775 aa11.85□□□□□ -0.51
PICALM-221ENST00000533350 PROM2Q8N271 834 aa11.77□□□□□ -0.53
PICALM-221ENST00000533350 RTN4Q9NQC3 1192 aaKnown RBP11.76□□□□□ -0.53
PICALM-221ENST00000533350 ZNF579Q8NAF0 562 aaKnown RBP11.72□□□□□ -0.53
PICALM-221ENST00000533350 OTUD5Q96G74 571 aa11.7□□□□□ -0.54
PICALM-221ENST00000533350 VASPP50552 380 aaPredicted RBP11.69□□□□□ -0.54
PICALM-221ENST00000533350 ZRANB1Q9UGI0 708 aa11.69□□□□□ -0.54
PICALM-221ENST00000533350 POTEB2H3BUK9 544 aa11.62□□□□□ -0.55
PICALM-221ENST00000533350 GALR2O43603 387 aaPredicted RBP11.62□□□□□ -0.55
PICALM-221ENST00000533350 POTEMA6NI47 508 aa11.61□□□□□ -0.55
PICALM-221ENST00000533350 STAG3Q9UJ98 1225 aa11.6□□□□□ -0.55
PICALM-221ENST00000533350 CREBZFQ9NS37 354 aa11.57□□□□□ -0.56
PICALM-221ENST00000533350 POTEGQ6S5H5 508 aa11.56□□□□□ -0.56
PICALM-221ENST00000533350 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms