RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-223ENST00000576932 AEBP2Q6ZN18 517 aaPredicted RBP26.88■■□□□ 1.89
TOM1L1-223ENST00000576932 CHIC1Q5VXU3 224 aa26.72■■□□□ 1.87
TOM1L1-223ENST00000576932 NISCHQ9Y2I1 1504 aa23.79■■□□□ 1.4
TOM1L1-223ENST00000576932 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
TOM1L1-223ENST00000576932 SENP3Q9H4L4 574 aaPredicted RBP23.12■■□□□ 1.29
TOM1L1-223ENST00000576932 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
TOM1L1-223ENST00000576932 ABCC9O60706 1549 aa21.93■■□□□ 1.1
TOM1L1-223ENST00000576932 CCDC180Q9P1Z9 1646 aa21.59■■□□□ 1.05
TOM1L1-223ENST00000576932 FOXD1Q16676 465 aa21.2■□□□□ 0.98
TOM1L1-223ENST00000576932 DNAJC5BQ9UF47 199 aa20.98■□□□□ 0.95
TOM1L1-223ENST00000576932 RB1CC1Q8TDY2 1594 aa20.76■□□□□ 0.91
TOM1L1-223ENST00000576932 ADRA2BP18089 450 aa20.57■□□□□ 0.88
TOM1L1-223ENST00000576932 NACADO15069 1562 aa20.53■□□□□ 0.88
TOM1L1-223ENST00000576932 PPP6R1Q9UPN7 881 aa20.48■□□□□ 0.87
TOM1L1-223ENST00000576932 PABPN1Q86U42 306 aaKnown RBP eCLIP20.31■□□□□ 0.84
TOM1L1-223ENST00000576932 UNC13AQ9UPW8 1703 aa20.22■□□□□ 0.83
TOM1L1-223ENST00000576932 PIAS4Q8N2W9 510 aaPredicted RBP20.2■□□□□ 0.82
TOM1L1-223ENST00000576932 MYO15BQ96JP2 1530 aa20.17■□□□□ 0.82
TOM1L1-223ENST00000576932 BICRAQ9NZM4 1560 aa20.14■□□□□ 0.81
TOM1L1-223ENST00000576932 DCAF8L2P0C7V8 631 aa20.13■□□□□ 0.81
TOM1L1-223ENST00000576932 SHROOM4Q9ULL8 1493 aa19.97■□□□□ 0.79
TOM1L1-223ENST00000576932 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
TOM1L1-223ENST00000576932 CC2D2AQ9P2K1 1620 aa19.83■□□□□ 0.76
TOM1L1-223ENST00000576932 MSH5O43196 834 aa19.72■□□□□ 0.75
TOM1L1-223ENST00000576932 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
TOM1L1-223ENST00000576932 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
TOM1L1-223ENST00000576932 DNAJC5Q9H3Z4 198 aa19.69■□□□□ 0.74
TOM1L1-223ENST00000576932 ZCCHC6Q5VYS8 1495 aaKnown RBP19.62■□□□□ 0.73
TOM1L1-223ENST00000576932 SCRIBQ14160 1630 aa19.52■□□□□ 0.72
TOM1L1-223ENST00000576932 PPP4R3CPQ6ZMV5 832 aa19.27■□□□□ 0.68
TOM1L1-223ENST00000576932 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
TOM1L1-223ENST00000576932 CUX2O14529 1486 aa19.22■□□□□ 0.67
TOM1L1-223ENST00000576932 NCBP3Q53F19 620 aaKnown RBP19.08■□□□□ 0.64
TOM1L1-223ENST00000576932 KCNA4P22459 653 aa19.01■□□□□ 0.63
TOM1L1-223ENST00000576932 ERCC6Q03468 1493 aa19■□□□□ 0.63
TOM1L1-223ENST00000576932 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
TOM1L1-223ENST00000576932 ATAD2BQ9ULI0 1458 aa18.79■□□□□ 0.6
TOM1L1-223ENST00000576932 HMGXB3Q12766 1538 aa18.78■□□□□ 0.6
TOM1L1-223ENST00000576932 CNKSR2Q8WXI2 1034 aa18.77■□□□□ 0.6
TOM1L1-223ENST00000576932 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
TOM1L1-223ENST00000576932 NESP48681 1621 aa18.7■□□□□ 0.58
TOM1L1-223ENST00000576932 THOC2Q8NI27 1593 aaKnown RBP18.67■□□□□ 0.58
TOM1L1-223ENST00000576932 SMARCA4P51532 1647 aa18.64■□□□□ 0.57
TOM1L1-223ENST00000576932 LAMC3Q9Y6N6 1575 aa18.6■□□□□ 0.57
TOM1L1-223ENST00000576932 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.56
TOM1L1-223ENST00000576932 PEG3Q9GZU2 1588 aa18.54■□□□□ 0.56
TOM1L1-223ENST00000576932 MAPK8IP2Q13387 824 aaPredicted RBP18.52■□□□□ 0.56
TOM1L1-223ENST00000576932 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
TOM1L1-223ENST00000576932 NPM3O75607 178 aaKnown RBP18.51■□□□□ 0.55
TOM1L1-223ENST00000576932 TRIM41Q8WV44 630 aa18.51■□□□□ 0.55
TOM1L1-223ENST00000576932 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
TOM1L1-223ENST00000576932 KIF21AQ7Z4S6 1674 aa18.45■□□□□ 0.54
TOM1L1-223ENST00000576932 DMRT2Q9Y5R5 561 aa18.4■□□□□ 0.54
TOM1L1-223ENST00000576932 MRC2Q9UBG0 1479 aa18.34■□□□□ 0.53
TOM1L1-223ENST00000576932 WDR62O43379 1518 aa18.33■□□□□ 0.53
TOM1L1-223ENST00000576932 CADPSQ9ULU8 1353 aa18.33■□□□□ 0.53
TOM1L1-223ENST00000576932 RNF216Q9NWF9 866 aaPredicted RBP18.32■□□□□ 0.52
TOM1L1-223ENST00000576932 SLC4A1APQ9BWU0 796 aaKnown RBP18.31■□□□□ 0.52
TOM1L1-223ENST00000576932 MROH2BQ7Z745 1585 aa18.28■□□□□ 0.52
TOM1L1-223ENST00000576932 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
TOM1L1-223ENST00000576932 CEP164Q9UPV0 1460 aa18.18■□□□□ 0.5
TOM1L1-223ENST00000576932 HOXD11P31277 338 aaPredicted RBP18.11■□□□□ 0.49
TOM1L1-223ENST00000576932 FANCD2Q9BXW9 1451 aa18.1■□□□□ 0.49
TOM1L1-223ENST00000576932 CFTRP13569 1480 aa18.04■□□□□ 0.48
TOM1L1-223ENST00000576932 WIZO95785 1651 aa18.01■□□□□ 0.47
TOM1L1-223ENST00000576932 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
TOM1L1-223ENST00000576932 RIMBP3CA6NJZ7 1639 aa17.99■□□□□ 0.47
TOM1L1-223ENST00000576932 RIMBP3BA6NNM3 1639 aa17.99■□□□□ 0.47
TOM1L1-223ENST00000576932 RIMBP3Q9UFD9 1639 aa17.99■□□□□ 0.47
TOM1L1-223ENST00000576932 URB2Q14146 1524 aaKnown RBP17.97■□□□□ 0.47
TOM1L1-223ENST00000576932 ARHGEF11O15085 1522 aa17.91■□□□□ 0.46
TOM1L1-223ENST00000576932 IFT140Q96RY7 1462 aa17.85■□□□□ 0.45
TOM1L1-223ENST00000576932 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
TOM1L1-223ENST00000576932 ZNF608Q9ULD9 1512 aaPredicted RBP17.8■□□□□ 0.44
TOM1L1-223ENST00000576932 PRDM2Q13029 1718 aa17.79■□□□□ 0.44
TOM1L1-223ENST00000576932 RSF1Q96T23 1441 aaPredicted RBP17.75■□□□□ 0.43
TOM1L1-223ENST00000576932 CYB5RLQ6IPT4 315 aa17.75■□□□□ 0.43
TOM1L1-223ENST00000576932 ABCC8Q09428 1581 aa17.71■□□□□ 0.43
TOM1L1-223ENST00000576932 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
TOM1L1-223ENST00000576932 TOPBP1Q92547 1522 aa17.7■□□□□ 0.42
TOM1L1-223ENST00000576932 ARAP1Q96P48 1450 aa17.69■□□□□ 0.42
TOM1L1-223ENST00000576932 DCAF8L1A6NGE4 600 aa17.69■□□□□ 0.42
TOM1L1-223ENST00000576932 TRHP20396 242 aaPredicted RBP17.69■□□□□ 0.42
TOM1L1-223ENST00000576932 CHD1O14646 1710 aa17.63■□□□□ 0.41
TOM1L1-223ENST00000576932 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
TOM1L1-223ENST00000576932 TARBP1Q13395 1621 aaKnown RBP17.59■□□□□ 0.41
TOM1L1-223ENST00000576932 CCDC88BA6NC98 1476 aa17.58■□□□□ 0.41
TOM1L1-223ENST00000576932 CSRNP3Q8WYN3 585 aa17.58■□□□□ 0.4
TOM1L1-223ENST00000576932 FOXD4L1Q9NU39 408 aa17.58■□□□□ 0.4
TOM1L1-223ENST00000576932 AQRO60306 1485 aaKnown RBP eCLIP17.57■□□□□ 0.4
TOM1L1-223ENST00000576932 FBLN2P98095 1184 aa17.51■□□□□ 0.39
TOM1L1-223ENST00000576932 POLA1P09884 1462 aaPredicted RBP17.5■□□□□ 0.39
TOM1L1-223ENST00000576932 CLASP1Q7Z460 1538 aa17.48■□□□□ 0.39
TOM1L1-223ENST00000576932 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
TOM1L1-223ENST00000576932 SYNJ1O43426 1573 aa17.43■□□□□ 0.38
TOM1L1-223ENST00000576932 SNAPC4Q5SXM2 1469 aa17.4■□□□□ 0.38
TOM1L1-223ENST00000576932 MAGI1Q96QZ7 1491 aaPredicted RBP17.4■□□□□ 0.38
TOM1L1-223ENST00000576932 SOGA1O94964 1423 aa17.39■□□□□ 0.38
TOM1L1-223ENST00000576932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.39■□□□□ 0.374e-8■■□□□ 13.9
TOM1L1-223ENST00000576932 TDRD9Q8NDG6 1382 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms