RNA–Protein interactions for RNA: ENST00000486616.5

VILL-209, Transcript of villin like, humanhuman

TSL 2

Gene VILL, Length 4,439 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VILL-209ENST00000486616 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
VILL-209ENST00000486616 DCAF8L2P0C7V8 631 aa26.06■■□□□ 1.76
VILL-209ENST00000486616 SUPT5HO00267 1087 aaKnown RBP24.47■■□□□ 1.51
VILL-209ENST00000486616 SHROOM4Q9ULL8 1493 aa24.46■■□□□ 1.51
VILL-209ENST00000486616 EHMT2Q96KQ7 1210 aa23.11■■□□□ 1.29
VILL-209ENST00000486616 ABCC9O60706 1549 aa23.04■■□□□ 1.28
VILL-209ENST00000486616 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
VILL-209ENST00000486616 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
VILL-209ENST00000486616 APLP2Q06481 763 aa22.81■■□□□ 1.24
VILL-209ENST00000486616 PABPN1Q86U42 306 aaKnown RBP eCLIP22.52■■□□□ 1.2
VILL-209ENST00000486616 CCDC180Q9P1Z9 1646 aa22.5■■□□□ 1.19
VILL-209ENST00000486616 UBTFP17480 764 aaKnown RBP22.41■■□□□ 1.18
VILL-209ENST00000486616 RANGAP1P46060 587 aaPredicted RBP22.37■■□□□ 1.17
VILL-209ENST00000486616 ZCCHC6Q5VYS8 1495 aaKnown RBP22.31■■□□□ 1.16
VILL-209ENST00000486616 TTBK1Q5TCY1 1321 aaPredicted RBP22.23■■□□□ 1.15
VILL-209ENST00000486616 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
VILL-209ENST00000486616 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
VILL-209ENST00000486616 PCGF6Q9BYE7 350 aa22.11■■□□□ 1.13
VILL-209ENST00000486616 SCRIBQ14160 1630 aa21.97■■□□□ 1.11
VILL-209ENST00000486616 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
VILL-209ENST00000486616 LOC105371045A0A1W2PR82 267 aa21.79■■□□□ 1.08
VILL-209ENST00000486616 NACADO15069 1562 aa21.75■■□□□ 1.07
VILL-209ENST00000486616 CCER1Q8TC90 406 aaPredicted RBP21.74■■□□□ 1.07
VILL-209ENST00000486616 ZEB1P37275 1124 aaPredicted RBP21.72■■□□□ 1.07
VILL-209ENST00000486616 PPARGC1BQ86YN6 1023 aaKnown RBP21.66■■□□□ 1.06
VILL-209ENST00000486616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.63■■□□□ 1.05
VILL-209ENST00000486616 HNRNPUL2Q1KMD3 747 aaKnown RBP21.63■■□□□ 1.05
VILL-209ENST00000486616 TRIM26Q12899 539 aaPredicted RBP21.58■■□□□ 1.05
VILL-209ENST00000486616 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
VILL-209ENST00000486616 ITGAEP38570 1179 aa21.38■■□□□ 1.01
VILL-209ENST00000486616 CSRNP3Q8WYN3 585 aa21.36■■□□□ 1.01
VILL-209ENST00000486616 MYT1LQ9UL68 1186 aa21.31■■□□□ 1
VILL-209ENST00000486616 FBLN2P98095 1184 aa21.3■■□□□ 1
VILL-209ENST00000486616 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
VILL-209ENST00000486616 PELP1Q8IZL8 1130 aaKnown RBP21.18■□□□□ 0.98
VILL-209ENST00000486616 BAZ1AQ9NRL2 1556 aaPredicted RBP21.12■□□□□ 0.97
VILL-209ENST00000486616 MYO15BQ96JP2 1530 aa21.11■□□□□ 0.97
VILL-209ENST00000486616 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
VILL-209ENST00000486616 FAM50AQ14320 339 aaKnown RBP21.07■□□□□ 0.96
VILL-209ENST00000486616 CECR2Q9BXF3 1484 aa21.02■□□□□ 0.95
VILL-209ENST00000486616 CENPBP07199 599 aaPredicted RBP21■□□□□ 0.95
VILL-209ENST00000486616 P3H3Q8IVL6 736 aa21■□□□□ 0.95
VILL-209ENST00000486616 HRCP23327 699 aa20.96■□□□□ 0.95
VILL-209ENST00000486616 CDK11AQ9UQ88 783 aaPredicted RBP20.87■□□□□ 0.93
VILL-209ENST00000486616 WRNQ14191 1432 aaPredicted RBP eCLIP20.84■□□□□ 0.93
VILL-209ENST00000486616 TRIM52Q96A61 297 aa20.83■□□□□ 0.92
VILL-209ENST00000486616 EEA1Q15075 1411 aa20.8■□□□□ 0.92
VILL-209ENST00000486616 ARID3CA6NKF2 412 aa20.79■□□□□ 0.92
VILL-209ENST00000486616 MROH2BQ7Z745 1585 aa20.76■□□□□ 0.91
VILL-209ENST00000486616 CHMP7Q8WUX9 453 aaPredicted RBP20.75■□□□□ 0.91
VILL-209ENST00000486616 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
VILL-209ENST00000486616 SMARCA2P51531 1590 aa20.71■□□□□ 0.91
VILL-209ENST00000486616 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
VILL-209ENST00000486616 NPM1P06748 294 aaKnown RBP eCLIP20.64■□□□□ 0.89
VILL-209ENST00000486616 YTHDC1Q96MU7 727 aaKnown RBP20.62■□□□□ 0.89
VILL-209ENST00000486616 ZNF777Q9ULD5 760 aaPredicted RBP20.62■□□□□ 0.89
VILL-209ENST00000486616 ERCC6Q03468 1493 aa20.6■□□□□ 0.89
VILL-209ENST00000486616 NEUROD1Q13562 356 aa20.59■□□□□ 0.89
VILL-209ENST00000486616 CLIP1P30622 1438 aa20.59■□□□□ 0.89
VILL-209ENST00000486616 NEFLP07196 543 aa20.58■□□□□ 0.88
VILL-209ENST00000486616 GOLGA3Q08378 1498 aa20.57■□□□□ 0.88
VILL-209ENST00000486616 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
VILL-209ENST00000486616 CEP164Q9UPV0 1460 aa20.47■□□□□ 0.87
VILL-209ENST00000486616 MTUS2Q5JR59 1369 aa20.46■□□□□ 0.87
VILL-209ENST00000486616 TOP2AP11388 1531 aaKnown RBP20.46■□□□□ 0.87
VILL-209ENST00000486616 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
VILL-209ENST00000486616 ATAD2BQ9ULI0 1458 aa20.45■□□□□ 0.86
VILL-209ENST00000486616 CEP162Q5TB80 1403 aa20.42■□□□□ 0.86
VILL-209ENST00000486616 TNIKQ9UKE5 1360 aa20.42■□□□□ 0.86
VILL-209ENST00000486616 WIZO95785 1651 aa20.42■□□□□ 0.86
VILL-209ENST00000486616 ZNF326Q5BKZ1 582 aaKnown RBP20.4■□□□□ 0.86
VILL-209ENST00000486616 CNGB1Q14028 1251 aaPredicted RBP20.4■□□□□ 0.86
VILL-209ENST00000486616 SLC4A1APQ9BWU0 796 aaKnown RBP20.39■□□□□ 0.85
VILL-209ENST00000486616 SMARCA4P51532 1647 aa20.39■□□□□ 0.85
VILL-209ENST00000486616 CADPSQ9ULU8 1353 aa20.37■□□□□ 0.85
VILL-209ENST00000486616 CUX2O14529 1486 aa20.37■□□□□ 0.85
VILL-209ENST00000486616 DIEXFQ68CQ4 756 aaKnown RBP20.37■□□□□ 0.85
VILL-209ENST00000486616 CARMIL1Q5VZK9 1371 aa20.33■□□□□ 0.84
VILL-209ENST00000486616 TSPY4P0CV99 314 aa20.33■□□□□ 0.84
VILL-209ENST00000486616 TSPY10P0CW01 314 aa20.33■□□□□ 0.84
VILL-209ENST00000486616 PLEKHD1A6NEE1 506 aa20.31■□□□□ 0.84
VILL-209ENST00000486616 SOGA1O94964 1423 aa20.29■□□□□ 0.84
VILL-209ENST00000486616 ESF1Q9H501 851 aaKnown RBP20.28■□□□□ 0.84
VILL-209ENST00000486616 CHIC2Q9UKJ5 165 aa20.26■□□□□ 0.83
VILL-209ENST00000486616 ABCC8Q09428 1581 aa20.24■□□□□ 0.83
VILL-209ENST00000486616 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
VILL-209ENST00000486616 KCNH8Q96L42 1107 aa20.18■□□□□ 0.82
VILL-209ENST00000486616 TONSLQ96HA7 1378 aa20.17■□□□□ 0.82
VILL-209ENST00000486616 TDRD9Q8NDG6 1382 aaKnown RBP20.15■□□□□ 0.82
VILL-209ENST00000486616 FHAD1B1AJZ9 1412 aa20.14■□□□□ 0.82
VILL-209ENST00000486616 ANP32CO43423 234 aa20.14■□□□□ 0.81
VILL-209ENST00000486616 BCANQ96GW7 911 aa20.14■□□□□ 0.81
VILL-209ENST00000486616 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
VILL-209ENST00000486616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.1■□□□□ 0.81
VILL-209ENST00000486616 CFDP1Q9UEE9 299 aaPredicted RBP20.09■□□□□ 0.81
VILL-209ENST00000486616 CHGAP10645 457 aaKnown RBP20.08■□□□□ 0.8
VILL-209ENST00000486616 ACIN1Q9UKV3 1341 aaKnown RBP20.07■□□□□ 0.8
VILL-209ENST00000486616 STAG3Q9UJ98 1225 aa20.07■□□□□ 0.8
VILL-209ENST00000486616 ERICH6Q7L0X2 663 aa20.06■□□□□ 0.8
VILL-209ENST00000486616 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms