RNA–Protein interactions for RNA: ENST00000532942.5

RCN1-210, Transcript of reticulocalbin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RCN1, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-210ENST00000532942 NISCHQ9Y2I1 1504 aa37.67■■■■□ 3.62
RCN1-210ENST00000532942 ABCC9O60706 1549 aa33.84■■■■□ 3.01
RCN1-210ENST00000532942 CCDC180Q9P1Z9 1646 aa33.7■■■□□ 2.99
RCN1-210ENST00000532942 RB1CC1Q8TDY2 1594 aa32.14■■■□□ 2.74
RCN1-210ENST00000532942 NACADO15069 1562 aa31.93■■■□□ 2.7
RCN1-210ENST00000532942 DCAF8L2P0C7V8 631 aa31.9■■■□□ 2.7
RCN1-210ENST00000532942 DNAJC5BQ9UF47 199 aa31.84■■■□□ 2.69
RCN1-210ENST00000532942 PABPN1Q86U42 306 aaKnown RBP eCLIP31.58■■■□□ 2.65
RCN1-210ENST00000532942 MYO15BQ96JP2 1530 aa31.49■■■□□ 2.63
RCN1-210ENST00000532942 UNC13AQ9UPW8 1703 aa31.32■■■□□ 2.61
RCN1-210ENST00000532942 BICRAQ9NZM4 1560 aa31.23■■■□□ 2.59
RCN1-210ENST00000532942 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
RCN1-210ENST00000532942 DCAF1Q9Y4B6 1507 aa31.08■■■□□ 2.57
RCN1-210ENST00000532942 SHROOM4Q9ULL8 1493 aa30.77■■■□□ 2.52
RCN1-210ENST00000532942 SCRIBQ14160 1630 aa30.77■■■□□ 2.52
RCN1-210ENST00000532942 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.48
RCN1-210ENST00000532942 CECR2Q9BXF3 1484 aa30.48■■■□□ 2.47
RCN1-210ENST00000532942 EIF4G1Q04637 1599 aaKnown RBP30.45■■■□□ 2.47
RCN1-210ENST00000532942 NCAPD3P42695 1498 aa29.53■■■□□ 2.32
RCN1-210ENST00000532942 ATAD2BQ9ULI0 1458 aa29.44■■■□□ 2.3
RCN1-210ENST00000532942 SMARCA4P51532 1647 aa29.34■■■□□ 2.29
RCN1-210ENST00000532942 SMARCA2P51531 1590 aa29.3■■■□□ 2.28
RCN1-210ENST00000532942 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
RCN1-210ENST00000532942 BAZ1AQ9NRL2 1556 aaPredicted RBP29.22■■■□□ 2.27
RCN1-210ENST00000532942 DNAJC5Q9H3Z4 198 aa29.21■■■□□ 2.27
RCN1-210ENST00000532942 ERCC6Q03468 1493 aa29.2■■■□□ 2.26
RCN1-210ENST00000532942 CUX2O14529 1486 aa29.13■■■□□ 2.25
RCN1-210ENST00000532942 BAZ1BQ9UIG0 1483 aaKnown RBP29.13■■■□□ 2.25
RCN1-210ENST00000532942 NESP48681 1621 aa29.07■■■□□ 2.24
RCN1-210ENST00000532942 PEG3Q9GZU2 1588 aa29.06■■■□□ 2.24
RCN1-210ENST00000532942 MROH2BQ7Z745 1585 aa29.05■■■□□ 2.24
RCN1-210ENST00000532942 LAMC3Q9Y6N6 1575 aa28.79■■■□□ 2.2
RCN1-210ENST00000532942 THOC2Q8NI27 1593 aaKnown RBP28.71■■■□□ 2.19
RCN1-210ENST00000532942 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
RCN1-210ENST00000532942 CADPSQ9ULU8 1353 aa28.65■■■□□ 2.18
RCN1-210ENST00000532942 WIZO95785 1651 aa28.64■■■□□ 2.18
RCN1-210ENST00000532942 KIF21AQ7Z4S6 1674 aa28.59■■■□□ 2.17
RCN1-210ENST00000532942 RSF1Q96T23 1441 aaPredicted RBP28.47■■■□□ 2.15
RCN1-210ENST00000532942 MRC2Q9UBG0 1479 aa28.43■■■□□ 2.14
RCN1-210ENST00000532942 WDR62O43379 1518 aa28.33■■■□□ 2.13
RCN1-210ENST00000532942 CEP164Q9UPV0 1460 aa28.31■■■□□ 2.12
RCN1-210ENST00000532942 CFTRP13569 1480 aa28.3■■■□□ 2.12
RCN1-210ENST00000532942 FANCD2Q9BXW9 1451 aa28.3■■■□□ 2.12
RCN1-210ENST00000532942 TOP2AP11388 1531 aaKnown RBP28.29■■■□□ 2.12
RCN1-210ENST00000532942 URB2Q14146 1524 aaKnown RBP28.07■■■□□ 2.08
RCN1-210ENST00000532942 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
RCN1-210ENST00000532942 TRIM41Q8WV44 630 aa27.93■■■□□ 2.06
RCN1-210ENST00000532942 OSCARQ8IYS5 282 aa27.87■■■□□ 2.05
RCN1-210ENST00000532942 PRDM2Q13029 1718 aa27.84■■■□□ 2.05
RCN1-210ENST00000532942 TOPBP1Q92547 1522 aa27.76■■■□□ 2.03
RCN1-210ENST00000532942 IFT140Q96RY7 1462 aa27.76■■■□□ 2.03
RCN1-210ENST00000532942 ZNF608Q9ULD9 1512 aaPredicted RBP27.74■■■□□ 2.03
RCN1-210ENST00000532942 ABCC8Q09428 1581 aa27.68■■■□□ 2.02
RCN1-210ENST00000532942 DNMBPQ6XZF7 1577 aa27.62■■■□□ 2.01
RCN1-210ENST00000532942 EIF4G3O43432 1585 aaKnown RBP27.51■■□□□ 1.99
RCN1-210ENST00000532942 AQRO60306 1485 aaKnown RBP eCLIP27.51■■□□□ 1.99
RCN1-210ENST00000532942 POLA1P09884 1462 aaPredicted RBP27.47■■□□□ 1.99
RCN1-210ENST00000532942 TARBP1Q13395 1621 aaKnown RBP27.47■■□□□ 1.99
RCN1-210ENST00000532942 RIMBP3CA6NJZ7 1639 aa27.41■■□□□ 1.98
RCN1-210ENST00000532942 RIMBP3BA6NNM3 1639 aa27.41■■□□□ 1.98
RCN1-210ENST00000532942 RIMBP3Q9UFD9 1639 aa27.41■■□□□ 1.98
RCN1-210ENST00000532942 RAD54L2Q9Y4B4 1467 aa27.41■■□□□ 1.98
RCN1-210ENST00000532942 SOGA1O94964 1423 aa27.39■■□□□ 1.97
RCN1-210ENST00000532942 ARHGEF11O15085 1522 aa27.36■■□□□ 1.97
RCN1-210ENST00000532942 TDRD9Q8NDG6 1382 aaKnown RBP27.35■■□□□ 1.97
RCN1-210ENST00000532942 FBLN2P98095 1184 aa27.35■■□□□ 1.97
RCN1-210ENST00000532942 FGD5Q6ZNL6 1462 aa27.31■■□□□ 1.96
RCN1-210ENST00000532942 CUX1P39880 1505 aa27.27■■□□□ 1.96
RCN1-210ENST00000532942 CHD1O14646 1710 aa27.27■■□□□ 1.96
RCN1-210ENST00000532942 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
RCN1-210ENST00000532942 CYB5RLQ6IPT4 315 aa27.24■■□□□ 1.95
RCN1-210ENST00000532942 SNAPC4Q5SXM2 1469 aa27.19■■□□□ 1.94
RCN1-210ENST00000532942 WDR97A6NE52 1622 aa27.15■■□□□ 1.94
RCN1-210ENST00000532942 CHMP7Q8WUX9 453 aaPredicted RBP27.13■■□□□ 1.93
RCN1-210ENST00000532942 GRIN2BQ13224 1484 aa27.12■■□□□ 1.93
RCN1-210ENST00000532942 ARAP1Q96P48 1450 aa27.11■■□□□ 1.93
RCN1-210ENST00000532942 MAGI1Q96QZ7 1491 aaPredicted RBP27.1■■□□□ 1.93
RCN1-210ENST00000532942 SYNJ2O15056 1496 aa27.02■■□□□ 1.92
RCN1-210ENST00000532942 GAPVD1Q14C86 1478 aa27.02■■□□□ 1.92
RCN1-210ENST00000532942 CLASP1Q7Z460 1538 aa27.01■■□□□ 1.91
RCN1-210ENST00000532942 ABCA10Q8WWZ4 1543 aa26.99■■□□□ 1.91
RCN1-210ENST00000532942 SYNJ1O43426 1573 aa26.98■■□□□ 1.91
RCN1-210ENST00000532942 TRHP20396 242 aaPredicted RBP26.93■■□□□ 1.9
RCN1-210ENST00000532942 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
RCN1-210ENST00000532942 PBRM1Q86U86 1689 aa26.9■■□□□ 1.9
RCN1-210ENST00000532942 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
RCN1-210ENST00000532942 TOP2BQ02880 1626 aa26.79■■□□□ 1.88
RCN1-210ENST00000532942 BIVM-ERCC5R4GMW8 1640 aa26.77■■□□□ 1.88
RCN1-210ENST00000532942 GRIN2AQ12879 1464 aa26.76■■□□□ 1.87
RCN1-210ENST00000532942 ADAMTS12P58397 1594 aa26.71■■□□□ 1.87
RCN1-210ENST00000532942 FHAD1B1AJZ9 1412 aa26.69■■□□□ 1.86
RCN1-210ENST00000532942 NUP160Q12769 1436 aa26.68■■□□□ 1.86
RCN1-210ENST00000532942 CEP170Q5SW79 1584 aa26.65■■□□□ 1.86
RCN1-210ENST00000532942 ERCC6L2Q5T890 1561 aa26.63■■□□□ 1.85
RCN1-210ENST00000532942 ERICH3Q5RHP9 1530 aa26.62■■□□□ 1.85
RCN1-210ENST00000532942 SHROOM2Q13796 1616 aa26.5■■□□□ 1.83
RCN1-210ENST00000532942 JPH4Q96JJ6 628 aa26.46■■□□□ 1.83
RCN1-210ENST00000532942 PRG4Q92954 1404 aaPredicted RBP26.45■■□□□ 1.82
RCN1-210ENST00000532942 IGF1RP08069 1367 aa26.37■■□□□ 1.81
RCN1-210ENST00000532942 KIF27Q86VH2 1401 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms