RNA–Protein interactions for RNA: ENST00000543005.5

GTF2H3-210, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 3

Gene GTF2H3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-210ENST00000543005 AEBP2Q6ZN18 517 aaPredicted RBP26.69■■□□□ 1.86
GTF2H3-210ENST00000543005 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
GTF2H3-210ENST00000543005 SENP3Q9H4L4 574 aaPredicted RBP22.85■■□□□ 1.25
GTF2H3-210ENST00000543005 PHF23Q9BUL5 403 aaPredicted RBP22.47■■□□□ 1.19
GTF2H3-210ENST00000543005 FOXD1Q16676 465 aa21.32■■□□□ 1
GTF2H3-210ENST00000543005 POTEDQ86YR6 584 aa20.23■□□□□ 0.83
GTF2H3-210ENST00000543005 MSH5O43196 834 aa20.13■□□□□ 0.81
GTF2H3-210ENST00000543005 PLPPR3Q6T4P5 718 aa19.82■□□□□ 0.76
GTF2H3-210ENST00000543005 PIAS4Q8N2W9 510 aaPredicted RBP19.79■□□□□ 0.76
GTF2H3-210ENST00000543005 PPP6R1Q9UPN7 881 aa19.64■□□□□ 0.73
GTF2H3-210ENST00000543005 ADRA2BP18089 450 aa19.52■□□□□ 0.72
GTF2H3-210ENST00000543005 DMRT2Q9Y5R5 561 aa18.08■□□□□ 0.48
GTF2H3-210ENST00000543005 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
GTF2H3-210ENST00000543005 SCAF1Q9H7N4 1312 aaKnown RBP17.92■□□□□ 0.46
GTF2H3-210ENST00000543005 CACNB1Q02641 598 aaPredicted RBP17.42■□□□□ 0.38
GTF2H3-210ENST00000543005 PPP4R3CPQ6ZMV5 832 aa17.3■□□□□ 0.36
GTF2H3-210ENST00000543005 HOXD11P31277 338 aaPredicted RBP17.29■□□□□ 0.36
GTF2H3-210ENST00000543005 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
GTF2H3-210ENST00000543005 RNF39Q9H2S5 420 aa17.14■□□□□ 0.33
GTF2H3-210ENST00000543005 CNKSR2Q8WXI2 1034 aa17.09■□□□□ 0.33
GTF2H3-210ENST00000543005 RNF216Q9NWF9 866 aaPredicted RBP17.04■□□□□ 0.32
GTF2H3-210ENST00000543005 C1QBPQ07021 282 aaKnown RBP16.88■□□□□ 0.29
GTF2H3-210ENST00000543005 DNAJC5BQ9UF47 199 aa16.86■□□□□ 0.29
GTF2H3-210ENST00000543005 NCBP3Q53F19 620 aaKnown RBP16.53■□□□□ 0.24
GTF2H3-210ENST00000543005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.37■□□□□ 0.21
GTF2H3-210ENST00000543005 NPM3O75607 178 aaKnown RBP16.29■□□□□ 0.2
GTF2H3-210ENST00000543005 U3KPZ7 1027 aaPredicted RBP16.03■□□□□ 0.16
GTF2H3-210ENST00000543005 DSG3P32926 999 aa15.91■□□□□ 0.14
GTF2H3-210ENST00000543005 SPINK5Q9NQ38 1064 aaPredicted RBP15.87■□□□□ 0.13
GTF2H3-210ENST00000543005 CAPN15O75808 1086 aa15.83■□□□□ 0.12
GTF2H3-210ENST00000543005 POTEHQ6S545 545 aa15.78■□□□□ 0.12
GTF2H3-210ENST00000543005 SLC4A2P04920 1241 aa15.67■□□□□ 0.1
GTF2H3-210ENST00000543005 KCNA4P22459 653 aa15.62■□□□□ 0.09
GTF2H3-210ENST00000543005 APLP2Q06481 763 aa15.57■□□□□ 0.08
GTF2H3-210ENST00000543005 ZNF219Q9P2Y4 722 aaPredicted RBP15.52■□□□□ 0.08
GTF2H3-210ENST00000543005 TRHP20396 242 aaPredicted RBP15.49■□□□□ 0.07
GTF2H3-210ENST00000543005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
GTF2H3-210ENST00000543005 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
GTF2H3-210ENST00000543005 ABCB7O75027 752 aa15.42■□□□□ 0.06
GTF2H3-210ENST00000543005 SAMD1Q6SPF0 538 aaPredicted RBP15.37■□□□□ 0.05
GTF2H3-210ENST00000543005 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
GTF2H3-210ENST00000543005 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
GTF2H3-210ENST00000543005 POLA2Q14181 598 aa15.03■□□□□ -0
GTF2H3-210ENST00000543005 CHRDL2Q6WN34 429 aa14.99□□□□□ -0.01
GTF2H3-210ENST00000543005 AKT1S1Q96B36 256 aa14.78□□□□□ -0.04
GTF2H3-210ENST00000543005 ZBTB12Q9Y330 459 aaPredicted RBP14.76□□□□□ -0.05
GTF2H3-210ENST00000543005 ATF5Q9Y2D1 282 aaPredicted RBP14.73□□□□□ -0.05
GTF2H3-210ENST00000543005 FOXD4L1Q9NU39 408 aa14.72□□□□□ -0.05
GTF2H3-210ENST00000543005 SLC4A1APQ9BWU0 796 aaKnown RBP14.66□□□□□ -0.06
GTF2H3-210ENST00000543005 SP7Q8TDD2 431 aaPredicted RBP14.63□□□□□ -0.07
GTF2H3-210ENST00000543005 REM2Q8IYK8 340 aaPredicted RBP14.61□□□□□ -0.07
GTF2H3-210ENST00000543005 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
GTF2H3-210ENST00000543005 PIP4P2Q8N4L2 257 aa14.55□□□□□ -0.08
GTF2H3-210ENST00000543005 PITPNM1O00562 1244 aa14.45□□□□□ -0.1
GTF2H3-210ENST00000543005 FXR2P51116 673 aaKnown RBP eCLIP14.45□□□□□ -0.1
GTF2H3-210ENST00000543005 ZBTB22O15209 634 aa14.37□□□□□ -0.11
GTF2H3-210ENST00000543005 ATXN8OSP0DMR3 200 aa14.37□□□□□ -0.11
GTF2H3-210ENST00000543005 HAX1O00165 279 aa14.33□□□□□ -0.12
GTF2H3-210ENST00000543005 SPDYE2BA6NHP3 402 aa14.26□□□□□ -0.13
GTF2H3-210ENST00000543005 SPDYE6P0CI01 402 aa14.26□□□□□ -0.13
GTF2H3-210ENST00000543005 SPDYE2Q495Y8 402 aa14.26□□□□□ -0.13
GTF2H3-210ENST00000543005 FBLN2P98095 1184 aa14.19□□□□□ -0.14
GTF2H3-210ENST00000543005 EVX2Q03828 476 aa14.16□□□□□ -0.14
GTF2H3-210ENST00000543005 SPDYE1Q8NFV5 336 aaPredicted RBP14.09□□□□□ -0.15
GTF2H3-210ENST00000543005 MKRN4PQ13434 485 aaPredicted RBP14.06□□□□□ -0.16
GTF2H3-210ENST00000543005 PRKAR2AP13861 404 aaKnown RBP14.05□□□□□ -0.16
GTF2H3-210ENST00000543005 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
GTF2H3-210ENST00000543005 C19orf67A6NJJ6 358 aa13.99□□□□□ -0.17
GTF2H3-210ENST00000543005 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
GTF2H3-210ENST00000543005 ZNF692Q9BU19 519 aaPredicted RBP13.97□□□□□ -0.17
GTF2H3-210ENST00000543005 GABBR2O75899 941 aa13.84□□□□□ -0.19
GTF2H3-210ENST00000543005 CHADLQ6NUI6 762 aa13.77□□□□□ -0.21
GTF2H3-210ENST00000543005 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
GTF2H3-210ENST00000543005 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
GTF2H3-210ENST00000543005 LHX8Q68G74 356 aa13.7□□□□□ -0.22
GTF2H3-210ENST00000543005 CLCN6P51797 869 aa13.6□□□□□ -0.23
GTF2H3-210ENST00000543005 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
GTF2H3-210ENST00000543005 CD44P16070 742 aaKnown RBP13.58□□□□□ -0.24
GTF2H3-210ENST00000543005 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
GTF2H3-210ENST00000543005 ZNF579Q8NAF0 562 aaKnown RBP13.42□□□□□ -0.26
GTF2H3-210ENST00000543005 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
GTF2H3-210ENST00000543005 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
GTF2H3-210ENST00000543005 DCBLD2Q96PD2 775 aa13.35□□□□□ -0.27
GTF2H3-210ENST00000543005 STAG3Q9UJ98 1225 aa13.35□□□□□ -0.27
GTF2H3-210ENST00000543005 ZRANB1Q9UGI0 708 aa13.32□□□□□ -0.28
GTF2H3-210ENST00000543005 GALR2O43603 387 aaPredicted RBP13.23□□□□□ -0.29
GTF2H3-210ENST00000543005 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
GTF2H3-210ENST00000543005 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
GTF2H3-210ENST00000543005 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
GTF2H3-210ENST00000543005 OTUD5Q96G74 571 aa13.12□□□□□ -0.31
GTF2H3-210ENST00000543005 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
GTF2H3-210ENST00000543005 POTEB2H3BUK9 544 aa13.09□□□□□ -0.31
GTF2H3-210ENST00000543005 PHF12Q96QT6 1004 aa13.09□□□□□ -0.31
GTF2H3-210ENST00000543005 PLSCR2Q9NRY7 297 aa13.02□□□□□ -0.33
GTF2H3-210ENST00000543005 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
GTF2H3-210ENST00000543005 ASTLQ6HA08 431 aaPredicted RBP12.98□□□□□ -0.33
GTF2H3-210ENST00000543005 MS4A3Q96HJ5 214 aa12.93□□□□□ -0.34
GTF2H3-210ENST00000543005 ATMINO43313 823 aaPredicted RBP12.92□□□□□ -0.34
GTF2H3-210ENST00000543005 C7P10643 843 aa12.91□□□□□ -0.34
GTF2H3-210ENST00000543005 PROM2Q8N271 834 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms