RNA–Protein interactions for RNA: ENST00000536554.5

TOM1L1-203, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-203ENST00000536554 AEBP2Q6ZN18 517 aaPredicted RBP21.95■■□□□ 1.1
TOM1L1-203ENST00000536554 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
TOM1L1-203ENST00000536554 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
TOM1L1-203ENST00000536554 NISCHQ9Y2I1 1504 aa18.6■□□□□ 0.57
TOM1L1-203ENST00000536554 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
TOM1L1-203ENST00000536554 FOXD1Q16676 465 aa17.64■□□□□ 0.41
TOM1L1-203ENST00000536554 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
TOM1L1-203ENST00000536554 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
TOM1L1-203ENST00000536554 MSH5O43196 834 aa16.8■□□□□ 0.28
TOM1L1-203ENST00000536554 PIAS4Q8N2W9 510 aaPredicted RBP16.38■□□□□ 0.21
TOM1L1-203ENST00000536554 CCDC180Q9P1Z9 1646 aa16.22■□□□□ 0.19
TOM1L1-203ENST00000536554 PPP6R1Q9UPN7 881 aa16.01■□□□□ 0.15
TOM1L1-203ENST00000536554 ADRA2BP18089 450 aa15.99■□□□□ 0.15
TOM1L1-203ENST00000536554 ZCCHC6Q5VYS8 1495 aaKnown RBP15.57■□□□□ 0.08
TOM1L1-203ENST00000536554 ABCC9O60706 1549 aa15.52■□□□□ 0.07
TOM1L1-203ENST00000536554 DCAF8L2P0C7V8 631 aa15.44■□□□□ 0.06
TOM1L1-203ENST00000536554 DCAF1Q9Y4B6 1507 aa15.39■□□□□ 0.05
TOM1L1-203ENST00000536554 MYO15BQ96JP2 1530 aa15.29■□□□□ 0.04
TOM1L1-203ENST00000536554 NACADO15069 1562 aa15.21■□□□□ 0.03
TOM1L1-203ENST00000536554 RB1CC1Q8TDY2 1594 aa15.09■□□□□ 0.01
TOM1L1-203ENST00000536554 SHROOM4Q9ULL8 1493 aa15.03■□□□□ -0
TOM1L1-203ENST00000536554 PPP4R3CPQ6ZMV5 832 aa14.9□□□□□ -0.02
TOM1L1-203ENST00000536554 SCRIBQ14160 1630 aa14.88□□□□□ -0.03
TOM1L1-203ENST00000536554 DMRT2Q9Y5R5 561 aa14.87□□□□□ -0.03
TOM1L1-203ENST00000536554 KCNA4P22459 653 aa14.84□□□□□ -0.03
TOM1L1-203ENST00000536554 MAPK8IP2Q13387 824 aaPredicted RBP14.82□□□□□ -0.04
TOM1L1-203ENST00000536554 CACNB1Q02641 598 aaPredicted RBP14.8□□□□□ -0.04
TOM1L1-203ENST00000536554 UNC13AQ9UPW8 1703 aa14.7□□□□□ -0.06
TOM1L1-203ENST00000536554 SCAF1Q9H7N4 1312 aaKnown RBP14.68□□□□□ -0.06
TOM1L1-203ENST00000536554 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
TOM1L1-203ENST00000536554 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
TOM1L1-203ENST00000536554 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
TOM1L1-203ENST00000536554 CECR2Q9BXF3 1484 aa14.47□□□□□ -0.09
TOM1L1-203ENST00000536554 SUPT5HO00267 1087 aaKnown RBP14.43□□□□□ -0.1
TOM1L1-203ENST00000536554 CNKSR2Q8WXI2 1034 aa14.42□□□□□ -0.1
TOM1L1-203ENST00000536554 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
TOM1L1-203ENST00000536554 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
TOM1L1-203ENST00000536554 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
TOM1L1-203ENST00000536554 BAZ1AQ9NRL2 1556 aaPredicted RBP14.36□□□□□ -0.11
TOM1L1-203ENST00000536554 MROH2BQ7Z745 1585 aa14.35□□□□□ -0.11
TOM1L1-203ENST00000536554 SMARCA4P51532 1647 aa14.29□□□□□ -0.12
TOM1L1-203ENST00000536554 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
TOM1L1-203ENST00000536554 EIF4G1Q04637 1599 aaKnown RBP14.21□□□□□ -0.14
TOM1L1-203ENST00000536554 WIZO95785 1651 aa14.19□□□□□ -0.14
TOM1L1-203ENST00000536554 SLC4A1APQ9BWU0 796 aaKnown RBP14.17□□□□□ -0.14
TOM1L1-203ENST00000536554 PEG3Q9GZU2 1588 aa14.15□□□□□ -0.14
TOM1L1-203ENST00000536554 ATAD2BQ9ULI0 1458 aa14.14□□□□□ -0.15
TOM1L1-203ENST00000536554 SMARCA2P51531 1590 aa14.1□□□□□ -0.15
TOM1L1-203ENST00000536554 HOXD11P31277 338 aaPredicted RBP14.08□□□□□ -0.16
TOM1L1-203ENST00000536554 NCAPD3P42695 1498 aa14.08□□□□□ -0.16
TOM1L1-203ENST00000536554 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
TOM1L1-203ENST00000536554 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
TOM1L1-203ENST00000536554 TOP2AP11388 1531 aaKnown RBP14.06□□□□□ -0.16
TOM1L1-203ENST00000536554 CC2D2AQ9P2K1 1620 aa14.03□□□□□ -0.16
TOM1L1-203ENST00000536554 C1QBPQ07021 282 aaKnown RBP14.02□□□□□ -0.16
TOM1L1-203ENST00000536554 BAZ1BQ9UIG0 1483 aaKnown RBP14.02□□□□□ -0.17
TOM1L1-203ENST00000536554 HMGXB3Q12766 1538 aa13.98□□□□□ -0.17
TOM1L1-203ENST00000536554 CCDC88BA6NC98 1476 aa13.96□□□□□ -0.18
TOM1L1-203ENST00000536554 DNAJC5BQ9UF47 199 aa13.91□□□□□ -0.18
TOM1L1-203ENST00000536554 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
TOM1L1-203ENST00000536554 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.22
TOM1L1-203ENST00000536554 CFTRP13569 1480 aa13.7□□□□□ -0.22
TOM1L1-203ENST00000536554 ZBTB22O15209 634 aa13.66□□□□□ -0.22
TOM1L1-203ENST00000536554 TRIM41Q8WV44 630 aa13.61□□□□□ -0.23
TOM1L1-203ENST00000536554 NESP48681 1621 aa13.58□□□□□ -0.24
TOM1L1-203ENST00000536554 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
TOM1L1-203ENST00000536554 LAMC3Q9Y6N6 1575 aa13.56□□□□□ -0.24
TOM1L1-203ENST00000536554 ABCC8Q09428 1581 aa13.54□□□□□ -0.24
TOM1L1-203ENST00000536554 WRNQ14191 1432 aaPredicted RBP eCLIP13.52□□□□□ -0.24
TOM1L1-203ENST00000536554 POTEHQ6S545 545 aa13.51□□□□□ -0.25
TOM1L1-203ENST00000536554 PDS5BQ9NTI5 1447 aa13.51□□□□□ -0.25
TOM1L1-203ENST00000536554 FANCD2Q9BXW9 1451 aa13.51□□□□□ -0.25
TOM1L1-203ENST00000536554 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
TOM1L1-203ENST00000536554 PRDM2Q13029 1718 aa13.49□□□□□ -0.25
TOM1L1-203ENST00000536554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.48□□□□□ -0.254e-8■■□□□ 13.9
TOM1L1-203ENST00000536554 SYNJ1O43426 1573 aa13.43□□□□□ -0.26
TOM1L1-203ENST00000536554 CUX1P39880 1505 aa13.42□□□□□ -0.26
TOM1L1-203ENST00000536554 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
TOM1L1-203ENST00000536554 TOP2BQ02880 1626 aa13.41□□□□□ -0.26
TOM1L1-203ENST00000536554 BIVM-ERCC5R4GMW8 1640 aa13.38□□□□□ -0.27
TOM1L1-203ENST00000536554 KIF21AQ7Z4S6 1674 aa13.35□□□□□ -0.27
TOM1L1-203ENST00000536554 URB2Q14146 1524 aaKnown RBP13.34□□□□□ -0.27
TOM1L1-203ENST00000536554 TOPBP1Q92547 1522 aa13.34□□□□□ -0.27
TOM1L1-203ENST00000536554 DNMBPQ6XZF7 1577 aa13.33□□□□□ -0.27
TOM1L1-203ENST00000536554 SOGA1O94964 1423 aa13.32□□□□□ -0.28
TOM1L1-203ENST00000536554 FAM9AQ8IZU1 332 aaPredicted RBP13.32□□□□□ -0.28
TOM1L1-203ENST00000536554 ERCC6Q03468 1493 aa13.31□□□□□ -0.28
TOM1L1-203ENST00000536554 MRC2Q9UBG0 1479 aa13.3□□□□□ -0.28
TOM1L1-203ENST00000536554 FGD5Q6ZNL6 1462 aa13.3□□□□□ -0.28
TOM1L1-203ENST00000536554 RUSC2Q8N2Y8 1516 aa13.27□□□□□ -0.28
TOM1L1-203ENST00000536554 EEA1Q15075 1411 aa13.27□□□□□ -0.29
TOM1L1-203ENST00000536554 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.29
TOM1L1-203ENST00000536554 POLA1P09884 1462 aaPredicted RBP13.26□□□□□ -0.29
TOM1L1-203ENST00000536554 LOC105371045A0A1W2PR82 267 aa13.24□□□□□ -0.29
TOM1L1-203ENST00000536554 WDR62O43379 1518 aa13.23□□□□□ -0.29
TOM1L1-203ENST00000536554 RAD54L2Q9Y4B4 1467 aa13.23□□□□□ -0.29
TOM1L1-203ENST00000536554 KIF27Q86VH2 1401 aa13.21□□□□□ -0.29
TOM1L1-203ENST00000536554 ABCA10Q8WWZ4 1543 aa13.2□□□□□ -0.3
TOM1L1-203ENST00000536554 THOC2Q8NI27 1593 aaKnown RBP13.19□□□□□ -0.3
TOM1L1-203ENST00000536554 CUX2O14529 1486 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms