RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 NISCHQ9Y2I1 1504 aa38.43■■■■□ 3.74
BRK1-201ENST00000530758 CCDC180Q9P1Z9 1646 aa34.04■■■■□ 3.04
BRK1-201ENST00000530758 ABCC9O60706 1549 aa33.37■■■□□ 2.93
BRK1-201ENST00000530758 ZCCHC6Q5VYS8 1495 aaKnown RBP32.09■■■□□ 2.73
BRK1-201ENST00000530758 RB1CC1Q8TDY2 1594 aa31.92■■■□□ 2.7
BRK1-201ENST00000530758 MYO15BQ96JP2 1530 aa31.91■■■□□ 2.7
BRK1-201ENST00000530758 NACADO15069 1562 aa31.9■■■□□ 2.7
BRK1-201ENST00000530758 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
BRK1-201ENST00000530758 DCAF8L2P0C7V8 631 aa31.81■■■□□ 2.68
BRK1-201ENST00000530758 UNC13AQ9UPW8 1703 aa31.33■■■□□ 2.61
BRK1-201ENST00000530758 PABPN1Q86U42 306 aaKnown RBP eCLIP31.11■■■□□ 2.57
BRK1-201ENST00000530758 BICRAQ9NZM4 1560 aa31.1■■■□□ 2.57
BRK1-201ENST00000530758 DNAJC5BQ9UF47 199 aa31.02■■■□□ 2.56
BRK1-201ENST00000530758 SCRIBQ14160 1630 aa30.95■■■□□ 2.55
BRK1-201ENST00000530758 SHROOM4Q9ULL8 1493 aa30.62■■■□□ 2.49
BRK1-201ENST00000530758 EIF4G1Q04637 1599 aaKnown RBP30.23■■■□□ 2.43
BRK1-201ENST00000530758 CC2D2AQ9P2K1 1620 aa30.19■■■□□ 2.42
BRK1-201ENST00000530758 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
BRK1-201ENST00000530758 BAZ1AQ9NRL2 1556 aaPredicted RBP29.75■■■□□ 2.35
BRK1-201ENST00000530758 SMARCA4P51532 1647 aa29.73■■■□□ 2.35
BRK1-201ENST00000530758 MROH2BQ7Z745 1585 aa29.6■■■□□ 2.33
BRK1-201ENST00000530758 PEG3Q9GZU2 1588 aa29.51■■■□□ 2.31
BRK1-201ENST00000530758 ATAD2BQ9ULI0 1458 aa29.48■■■□□ 2.31
BRK1-201ENST00000530758 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
BRK1-201ENST00000530758 NCAPD3P42695 1498 aa29.45■■■□□ 2.31
BRK1-201ENST00000530758 RSF1Q96T23 1441 aaPredicted RBP29.41■■■□□ 2.3
BRK1-201ENST00000530758 HMGXB3Q12766 1538 aa29.31■■■□□ 2.28
BRK1-201ENST00000530758 WIZO95785 1651 aa29.29■■■□□ 2.28
BRK1-201ENST00000530758 BAZ1BQ9UIG0 1483 aaKnown RBP29.21■■■□□ 2.27
BRK1-201ENST00000530758 TOP2AP11388 1531 aaKnown RBP29.01■■■□□ 2.23
BRK1-201ENST00000530758 NESP48681 1621 aa28.83■■■□□ 2.21
BRK1-201ENST00000530758 SUPT5HO00267 1087 aaKnown RBP28.82■■■□□ 2.2
BRK1-201ENST00000530758 ERCC6Q03468 1493 aa28.7■■■□□ 2.18
BRK1-201ENST00000530758 CCDC88BA6NC98 1476 aa28.68■■■□□ 2.18
BRK1-201ENST00000530758 LAMC3Q9Y6N6 1575 aa28.64■■■□□ 2.18
BRK1-201ENST00000530758 CADPSQ9ULU8 1353 aa28.58■■■□□ 2.17
BRK1-201ENST00000530758 CUX2O14529 1486 aa28.57■■■□□ 2.16
BRK1-201ENST00000530758 CFTRP13569 1480 aa28.5■■■□□ 2.15
BRK1-201ENST00000530758 KIF21AQ7Z4S6 1674 aa28.48■■■□□ 2.15
BRK1-201ENST00000530758 THOC2Q8NI27 1593 aaKnown RBP28.48■■■□□ 2.15
BRK1-201ENST00000530758 PDS5BQ9NTI5 1447 aa28.39■■■□□ 2.14
BRK1-201ENST00000530758 PRDM2Q13029 1718 aa28.34■■■□□ 2.13
BRK1-201ENST00000530758 FANCD2Q9BXW9 1451 aa28.21■■■□□ 2.11
BRK1-201ENST00000530758 MRC2Q9UBG0 1479 aa28.19■■■□□ 2.1
BRK1-201ENST00000530758 WDR62O43379 1518 aa28.14■■■□□ 2.1
BRK1-201ENST00000530758 CEP164Q9UPV0 1460 aa28.14■■■□□ 2.09
BRK1-201ENST00000530758 DNAJC5Q9H3Z4 198 aa28.08■■■□□ 2.09
BRK1-201ENST00000530758 URB2Q14146 1524 aaKnown RBP27.97■■■□□ 2.07
BRK1-201ENST00000530758 ABCC8Q09428 1581 aa27.89■■■□□ 2.05
BRK1-201ENST00000530758 DNMBPQ6XZF7 1577 aa27.82■■■□□ 2.04
BRK1-201ENST00000530758 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
BRK1-201ENST00000530758 CUX1P39880 1505 aa27.74■■■□□ 2.03
BRK1-201ENST00000530758 WRNQ14191 1432 aaPredicted RBP eCLIP27.68■■■□□ 2.023e-6■□□□□ 9.2
BRK1-201ENST00000530758 TOP2BQ02880 1626 aa27.63■■■□□ 2.01
BRK1-201ENST00000530758 BIVM-ERCC5R4GMW8 1640 aa27.63■■■□□ 2.01
BRK1-201ENST00000530758 POLA1P09884 1462 aaPredicted RBP27.6■■■□□ 2.01
BRK1-201ENST00000530758 SYNJ1O43426 1573 aa27.6■■■□□ 2.01
BRK1-201ENST00000530758 FGD5Q6ZNL6 1462 aa27.57■■■□□ 2
BRK1-201ENST00000530758 IFT140Q96RY7 1462 aa27.57■■■□□ 2
BRK1-201ENST00000530758 ZNF608Q9ULD9 1512 aaPredicted RBP27.55■■■□□ 2
BRK1-201ENST00000530758 TARBP1Q13395 1621 aaKnown RBP27.52■■■□□ 2
BRK1-201ENST00000530758 SOGA1O94964 1423 aa27.5■■□□□ 1.99
BRK1-201ENST00000530758 RAD54L2Q9Y4B4 1467 aa27.44■■□□□ 1.98
BRK1-201ENST00000530758 EIF4G3O43432 1585 aaKnown RBP27.41■■□□□ 1.98
BRK1-201ENST00000530758 WDR97A6NE52 1622 aa27.38■■□□□ 1.97
BRK1-201ENST00000530758 ABCA10Q8WWZ4 1543 aa27.36■■□□□ 1.97
BRK1-201ENST00000530758 AQRO60306 1485 aaKnown RBP eCLIP27.32■■□□□ 1.96
BRK1-201ENST00000530758 OSCARQ8IYS5 282 aa27.26■■□□□ 1.95
BRK1-201ENST00000530758 TRIM41Q8WV44 630 aa27.26■■□□□ 1.95
BRK1-201ENST00000530758 TDRD9Q8NDG6 1382 aaKnown RBP27.25■■□□□ 1.95
BRK1-201ENST00000530758 ABCA5Q8WWZ7 1642 aa27.22■■□□□ 1.95
BRK1-201ENST00000530758 CHIC1Q5VXU3 224 aa27.21■■□□□ 1.95
BRK1-201ENST00000530758 GAPVD1Q14C86 1478 aa27.18■■□□□ 1.94
BRK1-201ENST00000530758 CHD1O14646 1710 aa27.14■■□□□ 1.94
BRK1-201ENST00000530758 GRIN2BQ13224 1484 aa27.13■■□□□ 1.93
BRK1-201ENST00000530758 PBRM1Q86U86 1689 aa27.11■■□□□ 1.93
BRK1-201ENST00000530758 KIF27Q86VH2 1401 aa27.08■■□□□ 1.93
BRK1-201ENST00000530758 ERICH3Q5RHP9 1530 aa27.06■■□□□ 1.92
BRK1-201ENST00000530758 SNAPC4Q5SXM2 1469 aa27.05■■□□□ 1.92
BRK1-201ENST00000530758 MAGI1Q96QZ7 1491 aaPredicted RBP27.04■■□□□ 1.92
BRK1-201ENST00000530758 RIMBP3CA6NJZ7 1639 aa26.99■■□□□ 1.91
BRK1-201ENST00000530758 RIMBP3BA6NNM3 1639 aa26.99■■□□□ 1.91
BRK1-201ENST00000530758 RIMBP3Q9UFD9 1639 aa26.99■■□□□ 1.91
BRK1-201ENST00000530758 IGF1RP08069 1367 aa26.97■■□□□ 1.91
BRK1-201ENST00000530758 RUSC2Q8N2Y8 1516 aa26.95■■□□□ 1.9
BRK1-201ENST00000530758 FBLN2P98095 1184 aa26.93■■□□□ 1.9
BRK1-201ENST00000530758 ARHGEF11O15085 1522 aa26.92■■□□□ 1.9
BRK1-201ENST00000530758 SYNJ2O15056 1496 aa26.92■■□□□ 1.9
BRK1-201ENST00000530758 ADAMTS12P58397 1594 aa26.89■■□□□ 1.9
BRK1-201ENST00000530758 FHAD1B1AJZ9 1412 aa26.89■■□□□ 1.89
BRK1-201ENST00000530758 CUL7Q14999 1698 aa26.86■■□□□ 1.89
BRK1-201ENST00000530758 EEA1Q15075 1411 aa26.85■■□□□ 1.89
BRK1-201ENST00000530758 CLASP1Q7Z460 1538 aa26.85■■□□□ 1.89
BRK1-201ENST00000530758 CHMP7Q8WUX9 453 aaPredicted RBP26.84■■□□□ 1.89
BRK1-201ENST00000530758 CARMIL1Q5VZK9 1371 aa26.79■■□□□ 1.88
BRK1-201ENST00000530758 GRIN2AQ12879 1464 aa26.78■■□□□ 1.88
BRK1-201ENST00000530758 CSRNP3Q8WYN3 585 aa26.75■■□□□ 1.87
BRK1-201ENST00000530758 ARAP1Q96P48 1450 aa26.71■■□□□ 1.87
BRK1-201ENST00000530758 PRXQ9BXM0 1461 aa26.7■■□□□ 1.87
BRK1-201ENST00000530758 RAPGEF2Q9Y4G8 1499 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms