RNA–Protein interactions for RNA: ENST00000216361.8

COCH-201, Transcript of cochlin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COCH, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-201ENST00000216361 NISCHQ9Y2I1 1504 aa42.01■■■■■ 4.32
COCH-201ENST00000216361 SHROOM4Q9ULL8 1493 aa35.95■■■■□ 3.34
COCH-201ENST00000216361 ZCCHC6Q5VYS8 1495 aaKnown RBP35.63■■■■□ 3.29
COCH-201ENST00000216361 CCDC180Q9P1Z9 1646 aa35.55■■■■□ 3.28
COCH-201ENST00000216361 SUPT5HO00267 1087 aaKnown RBP35.42■■■■□ 3.26
COCH-201ENST00000216361 CHIC1Q5VXU3 224 aa34.7■■■■□ 3.15
COCH-201ENST00000216361 MYO15BQ96JP2 1530 aa34.67■■■■□ 3.14
COCH-201ENST00000216361 DCAF8L2P0C7V8 631 aa34.55■■■■□ 3.12
COCH-201ENST00000216361 DCAF1Q9Y4B6 1507 aa34.52■■■■□ 3.12
COCH-201ENST00000216361 HRCP23327 699 aa34.25■■■■□ 3.07
COCH-201ENST00000216361 PCGF6Q9BYE7 350 aa33.91■■■■□ 3.02
COCH-201ENST00000216361 ABCC9O60706 1549 aa33.67■■■□□ 2.98
COCH-201ENST00000216361 LOC105371045A0A1W2PR82 267 aa33.63■■■□□ 2.97
COCH-201ENST00000216361 PPARGC1BQ86YN6 1023 aaKnown RBP33.4■■■□□ 2.94
COCH-201ENST00000216361 RSF1Q96T23 1441 aaPredicted RBP33.38■■■□□ 2.93
COCH-201ENST00000216361 SCRIBQ14160 1630 aa33.32■■■□□ 2.92
COCH-201ENST00000216361 TRIM26Q12899 539 aaPredicted RBP33.25■■■□□ 2.91
COCH-201ENST00000216361 RB1CC1Q8TDY2 1594 aa33.07■■■□□ 2.88
COCH-201ENST00000216361 TRIM41Q8WV44 630 aa33■■■□□ 2.87
COCH-201ENST00000216361 NACADO15069 1562 aa32.78■■■□□ 2.84
COCH-201ENST00000216361 CECR2Q9BXF3 1484 aa32.72■■■□□ 2.83
COCH-201ENST00000216361 ZEB1P37275 1124 aaPredicted RBP32.69■■■□□ 2.82
COCH-201ENST00000216361 FAM9AQ8IZU1 332 aaPredicted RBP32.69■■■□□ 2.82
COCH-201ENST00000216361 MROH2BQ7Z745 1585 aa32.66■■■□□ 2.82
COCH-201ENST00000216361 WIZO95785 1651 aa32.48■■■□□ 2.79
COCH-201ENST00000216361 BAZ1AQ9NRL2 1556 aaPredicted RBP32.35■■■□□ 2.77
COCH-201ENST00000216361 EHMT2Q96KQ7 1210 aa32.34■■■□□ 2.77
COCH-201ENST00000216361 EIF4G1Q04637 1599 aaKnown RBP32.29■■■□□ 2.76
COCH-201ENST00000216361 TOP2AP11388 1531 aaKnown RBP32.02■■■□□ 2.72
COCH-201ENST00000216361 SMARCA4P51532 1647 aa31.9■■■□□ 2.7
COCH-201ENST00000216361 CCDC88BA6NC98 1476 aa31.88■■■□□ 2.69
COCH-201ENST00000216361 ABCC8Q09428 1581 aa31.87■■■□□ 2.69
COCH-201ENST00000216361 SMARCA2P51531 1590 aa31.85■■■□□ 2.69
COCH-201ENST00000216361 WRNQ14191 1432 aaPredicted RBP eCLIP31.82■■■□□ 2.68
COCH-201ENST00000216361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.8■■■□□ 2.68
COCH-201ENST00000216361 SCAF1Q9H7N4 1312 aaKnown RBP31.74■■■□□ 2.67
COCH-201ENST00000216361 CCER1Q8TC90 406 aaPredicted RBP31.73■■■□□ 2.67
COCH-201ENST00000216361 CEP162Q5TB80 1403 aa31.7■■■□□ 2.66
COCH-201ENST00000216361 SOGA1O94964 1423 aa31.66■■■□□ 2.66
COCH-201ENST00000216361 UNC13AQ9UPW8 1703 aa31.66■■■□□ 2.66
COCH-201ENST00000216361 TNIKQ9UKE5 1360 aa31.65■■■□□ 2.66
COCH-201ENST00000216361 EEA1Q15075 1411 aa31.61■■■□□ 2.65
COCH-201ENST00000216361 PELP1Q8IZL8 1130 aaKnown RBP31.52■■■□□ 2.64
COCH-201ENST00000216361 CSRNP3Q8WYN3 585 aa31.51■■■□□ 2.64
COCH-201ENST00000216361 RUSC2Q8N2Y8 1516 aa31.49■■■□□ 2.63
COCH-201ENST00000216361 TTBK1Q5TCY1 1321 aaPredicted RBP31.41■■■□□ 2.62
COCH-201ENST00000216361 GOLGA3Q08378 1498 aa31.39■■■□□ 2.62
COCH-201ENST00000216361 UBTFP17480 764 aaKnown RBP31.36■■■□□ 2.61
COCH-201ENST00000216361 ACIN1Q9UKV3 1341 aaKnown RBP31.34■■■□□ 2.61
COCH-201ENST00000216361 DIEXFQ68CQ4 756 aaKnown RBP31.34■■■□□ 2.61
COCH-201ENST00000216361 PEG3Q9GZU2 1588 aa31.32■■■□□ 2.6
COCH-201ENST00000216361 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
COCH-201ENST00000216361 NEUROD1Q13562 356 aa31.25■■■□□ 2.59
COCH-201ENST00000216361 PABPN1Q86U42 306 aaKnown RBP eCLIP31.19■■■□□ 2.58
COCH-201ENST00000216361 CEP164Q9UPV0 1460 aa31.17■■■□□ 2.58
COCH-201ENST00000216361 SYNJ1O43426 1573 aa31.16■■■□□ 2.58
COCH-201ENST00000216361 KIF21BO75037 1637 aa31.16■■■□□ 2.58
COCH-201ENST00000216361 CENPBP07199 599 aaPredicted RBP31.08■■■□□ 2.57
COCH-201ENST00000216361 ZNF316A6NFI3 1004 aaPredicted RBP31.04■■■□□ 2.56
COCH-201ENST00000216361 CLIP1P30622 1438 aa31.02■■■□□ 2.56
COCH-201ENST00000216361 ATAD2BQ9ULI0 1458 aa31.01■■■□□ 2.55
COCH-201ENST00000216361 BAZ1BQ9UIG0 1483 aaKnown RBP30.98■■■□□ 2.55
COCH-201ENST00000216361 VPS8Q8N3P4 1428 aa30.96■■■□□ 2.55
COCH-201ENST00000216361 GTF3C3Q9Y5Q9 886 aa30.95■■■□□ 2.54
COCH-201ENST00000216361 RAPGEF2Q9Y4G8 1499 aa30.88■■■□□ 2.53
COCH-201ENST00000216361 HNRNPUL2Q1KMD3 747 aaKnown RBP30.87■■■□□ 2.53
COCH-201ENST00000216361 TOP2BQ02880 1626 aa30.77■■■□□ 2.52
COCH-201ENST00000216361 APLP2Q06481 763 aa30.73■■■□□ 2.51
COCH-201ENST00000216361 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
COCH-201ENST00000216361 MIER1Q8N108 512 aa30.62■■■□□ 2.49
COCH-201ENST00000216361 ERICH3Q5RHP9 1530 aa30.61■■■□□ 2.49
COCH-201ENST00000216361 PRXQ9BXM0 1461 aa30.59■■■□□ 2.49
COCH-201ENST00000216361 RANGAP1P46060 587 aaPredicted RBP30.57■■■□□ 2.48
COCH-201ENST00000216361 YTHDC1Q96MU7 727 aaKnown RBP30.54■■■□□ 2.48
COCH-201ENST00000216361 ARAP1Q96P48 1450 aa30.52■■■□□ 2.48
COCH-201ENST00000216361 CLSPNQ9HAW4 1339 aa30.48■■■□□ 2.47
COCH-201ENST00000216361 DHX57Q6P158 1386 aaKnown RBP30.42■■■□□ 2.46
COCH-201ENST00000216361 CUX1P39880 1505 aa30.39■■■□□ 2.45
COCH-201ENST00000216361 HMGXB3Q12766 1538 aa30.38■■■□□ 2.45
COCH-201ENST00000216361 KANK4Q5T7N3 995 aaPredicted RBP30.36■■■□□ 2.45
COCH-201ENST00000216361 NCAPD3P42695 1498 aa30.35■■■□□ 2.45
COCH-201ENST00000216361 RRBP1Q9P2E9 1410 aaKnown RBP30.32■■■□□ 2.44
COCH-201ENST00000216361 KIF27Q86VH2 1401 aa30.32■■■□□ 2.44
COCH-201ENST00000216361 CUX2O14529 1486 aa30.23■■■□□ 2.43
COCH-201ENST00000216361 CFTRP13569 1480 aa30.21■■■□□ 2.43
COCH-201ENST00000216361 ARHGAP35Q9NRY4 1499 aa30.19■■■□□ 2.42
COCH-201ENST00000216361 CCNB3Q8WWL7 1395 aa30.13■■■□□ 2.41
COCH-201ENST00000216361 MYT1Q01538 1121 aa30■■■□□ 2.39
COCH-201ENST00000216361 IGF1RP08069 1367 aa29.98■■■□□ 2.39
COCH-201ENST00000216361 MAP3K1Q13233 1512 aa29.96■■■□□ 2.39
COCH-201ENST00000216361 PRDM2Q13029 1718 aa29.94■■■□□ 2.38
COCH-201ENST00000216361 TIAM1Q13009 1591 aa29.92■■■□□ 2.38
COCH-201ENST00000216361 RAB3GAP2Q9H2M9 1393 aa29.9■■■□□ 2.38
COCH-201ENST00000216361 ITGAEP38570 1179 aa29.88■■■□□ 2.37
COCH-201ENST00000216361 MAPKBP1O60336 1514 aa29.87■■■□□ 2.37
COCH-201ENST00000216361 CARMIL1Q5VZK9 1371 aa29.83■■■□□ 2.37
COCH-201ENST00000216361 LRRC9Q6ZRR7 1453 aa29.81■■■□□ 2.36
COCH-201ENST00000216361 SUPT16HQ9Y5B9 1047 aaKnown RBP29.78■■■□□ 2.36
COCH-201ENST00000216361 CADPSQ9ULU8 1353 aa29.78■■■□□ 2.36
COCH-201ENST00000216361 SETD5Q9C0A6 1442 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms