RNA–Protein interactions for RNA: ENST00000221957.8

PLIN3-201, Transcript of perilipin 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PLIN3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLIN3-201ENST00000221957 NISCHQ9Y2I1 1504 aa27.29■■□□□ 1.96
PLIN3-201ENST00000221957 CCDC180Q9P1Z9 1646 aa23.54■■□□□ 1.36
PLIN3-201ENST00000221957 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
PLIN3-201ENST00000221957 ZCCHC6Q5VYS8 1495 aaKnown RBP22.96■■□□□ 1.27
PLIN3-201ENST00000221957 DCAF8L2P0C7V8 631 aa22.82■■□□□ 1.24
PLIN3-201ENST00000221957 SUPT5HO00267 1087 aaKnown RBP22.8■■□□□ 1.24
PLIN3-201ENST00000221957 DCAF1Q9Y4B6 1507 aa22.43■■□□□ 1.18
PLIN3-201ENST00000221957 ABCC9O60706 1549 aa22.35■■□□□ 1.17
PLIN3-201ENST00000221957 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
PLIN3-201ENST00000221957 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
PLIN3-201ENST00000221957 SCRIBQ14160 1630 aa21.94■■□□□ 1.1
PLIN3-201ENST00000221957 HRCP23327 699 aa21.93■■□□□ 1.1
PLIN3-201ENST00000221957 NACADO15069 1562 aa21.93■■□□□ 1.1
PLIN3-201ENST00000221957 PCGF6Q9BYE7 350 aa21.78■■□□□ 1.08
PLIN3-201ENST00000221957 RB1CC1Q8TDY2 1594 aa21.7■■□□□ 1.06
PLIN3-201ENST00000221957 LOC105371045A0A1W2PR82 267 aa21.64■■□□□ 1.06
PLIN3-201ENST00000221957 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
PLIN3-201ENST00000221957 PPARGC1BQ86YN6 1023 aaKnown RBP21.46■■□□□ 1.03
PLIN3-201ENST00000221957 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
PLIN3-201ENST00000221957 UNC13AQ9UPW8 1703 aa21.34■■□□□ 1.01
PLIN3-201ENST00000221957 TRIM26Q12899 539 aaPredicted RBP21.31■■□□□ 1
PLIN3-201ENST00000221957 MROH2BQ7Z745 1585 aa21.22■□□□□ 0.99
PLIN3-201ENST00000221957 PABPN1Q86U42 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
PLIN3-201ENST00000221957 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
PLIN3-201ENST00000221957 BICRAQ9NZM4 1560 aa21.16■□□□□ 0.98
PLIN3-201ENST00000221957 WIZO95785 1651 aa21.13■□□□□ 0.97
PLIN3-201ENST00000221957 FAM9AQ8IZU1 332 aaPredicted RBP21.06■□□□□ 0.96
PLIN3-201ENST00000221957 BAZ1AQ9NRL2 1556 aaPredicted RBP21■□□□□ 0.95
PLIN3-201ENST00000221957 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
PLIN3-201ENST00000221957 ZEB1P37275 1124 aaPredicted RBP20.9■□□□□ 0.94
PLIN3-201ENST00000221957 EHMT2Q96KQ7 1210 aa20.87■□□□□ 0.93
PLIN3-201ENST00000221957 EIF4G1Q04637 1599 aaKnown RBP20.78■□□□□ 0.92
PLIN3-201ENST00000221957 TOP2AP11388 1531 aaKnown RBP20.69■□□□□ 0.9
PLIN3-201ENST00000221957 CCDC88BA6NC98 1476 aa20.63■□□□□ 0.89
PLIN3-201ENST00000221957 SMARCA2P51531 1590 aa20.61■□□□□ 0.89
PLIN3-201ENST00000221957 PEG3Q9GZU2 1588 aa20.59■□□□□ 0.89
PLIN3-201ENST00000221957 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
PLIN3-201ENST00000221957 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
PLIN3-201ENST00000221957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.44■□□□□ 0.86
PLIN3-201ENST00000221957 BAZ1BQ9UIG0 1483 aaKnown RBP20.44■□□□□ 0.86
PLIN3-201ENST00000221957 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
PLIN3-201ENST00000221957 SOGA1O94964 1423 aa20.38■□□□□ 0.85
PLIN3-201ENST00000221957 CEP162Q5TB80 1403 aa20.36■□□□□ 0.85
PLIN3-201ENST00000221957 CCER1Q8TC90 406 aaPredicted RBP20.36■□□□□ 0.85
PLIN3-201ENST00000221957 SCAF1Q9H7N4 1312 aaKnown RBP20.34■□□□□ 0.85
PLIN3-201ENST00000221957 TNIKQ9UKE5 1360 aa20.31■□□□□ 0.84
PLIN3-201ENST00000221957 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
PLIN3-201ENST00000221957 RUSC2Q8N2Y8 1516 aa20.29■□□□□ 0.84
PLIN3-201ENST00000221957 EEA1Q15075 1411 aa20.26■□□□□ 0.83
PLIN3-201ENST00000221957 TTBK1Q5TCY1 1321 aaPredicted RBP20.25■□□□□ 0.83
PLIN3-201ENST00000221957 CSRNP3Q8WYN3 585 aa20.25■□□□□ 0.83
PLIN3-201ENST00000221957 HMGXB3Q12766 1538 aa20.24■□□□□ 0.83
PLIN3-201ENST00000221957 UBTFP17480 764 aaKnown RBP20.16■□□□□ 0.82
PLIN3-201ENST00000221957 GOLGA3Q08378 1498 aa20.16■□□□□ 0.82
PLIN3-201ENST00000221957 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
PLIN3-201ENST00000221957 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
PLIN3-201ENST00000221957 DIEXFQ68CQ4 756 aaKnown RBP20.09■□□□□ 0.81
PLIN3-201ENST00000221957 ACIN1Q9UKV3 1341 aaKnown RBP20.06■□□□□ 0.8
PLIN3-201ENST00000221957 PELP1Q8IZL8 1130 aaKnown RBP20.05■□□□□ 0.8
PLIN3-201ENST00000221957 NEUROD1Q13562 356 aa20.03■□□□□ 0.8
PLIN3-201ENST00000221957 KIF21BO75037 1637 aa20.02■□□□□ 0.8
PLIN3-201ENST00000221957 CEP164Q9UPV0 1460 aa20.02■□□□□ 0.8
PLIN3-201ENST00000221957 CFTRP13569 1480 aa19.93■□□□□ 0.78
PLIN3-201ENST00000221957 CLIP1P30622 1438 aa19.93■□□□□ 0.78
PLIN3-201ENST00000221957 ZNF316A6NFI3 1004 aaPredicted RBP19.9■□□□□ 0.78
PLIN3-201ENST00000221957 VPS8Q8N3P4 1428 aa19.88■□□□□ 0.77
PLIN3-201ENST00000221957 RAPGEF2Q9Y4G8 1499 aa19.87■□□□□ 0.77
PLIN3-201ENST00000221957 CENPBP07199 599 aaPredicted RBP19.87■□□□□ 0.77
PLIN3-201ENST00000221957 DNAJC5BQ9UF47 199 aa19.86■□□□□ 0.77
PLIN3-201ENST00000221957 HNRNPUL2Q1KMD3 747 aaKnown RBP19.85■□□□□ 0.77
PLIN3-201ENST00000221957 CADPSQ9ULU8 1353 aa19.84■□□□□ 0.77
PLIN3-201ENST00000221957 GTF3C3Q9Y5Q9 886 aa19.83■□□□□ 0.76
PLIN3-201ENST00000221957 TOP2BQ02880 1626 aa19.82■□□□□ 0.76
PLIN3-201ENST00000221957 CUX1P39880 1505 aa19.77■□□□□ 0.76
PLIN3-201ENST00000221957 RANGAP1P46060 587 aaPredicted RBP19.77■□□□□ 0.76
PLIN3-201ENST00000221957 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
PLIN3-201ENST00000221957 APLP2Q06481 763 aa19.73■□□□□ 0.75
PLIN3-201ENST00000221957 NESP48681 1621 aa19.72■□□□□ 0.75
PLIN3-201ENST00000221957 PRDM2Q13029 1718 aa19.7■□□□□ 0.74
PLIN3-201ENST00000221957 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
PLIN3-201ENST00000221957 MIER1Q8N108 512 aa19.65■□□□□ 0.74
PLIN3-201ENST00000221957 PRXQ9BXM0 1461 aa19.65■□□□□ 0.74
PLIN3-201ENST00000221957 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
PLIN3-201ENST00000221957 ARAP1Q96P48 1450 aa19.62■□□□□ 0.73
PLIN3-201ENST00000221957 YTHDC1Q96MU7 727 aaKnown RBP19.61■□□□□ 0.73
PLIN3-201ENST00000221957 KANK4Q5T7N3 995 aaPredicted RBP19.54■□□□□ 0.72
PLIN3-201ENST00000221957 DHX57Q6P158 1386 aaKnown RBP19.53■□□□□ 0.72
PLIN3-201ENST00000221957 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.72
PLIN3-201ENST00000221957 CLSPNQ9HAW4 1339 aa19.5■□□□□ 0.71
PLIN3-201ENST00000221957 FGD5Q6ZNL6 1462 aa19.5■□□□□ 0.71
PLIN3-201ENST00000221957 KIF27Q86VH2 1401 aa19.49■□□□□ 0.71
PLIN3-201ENST00000221957 CUX2O14529 1486 aa19.46■□□□□ 0.71
PLIN3-201ENST00000221957 RRBP1Q9P2E9 1410 aaKnown RBP19.46■□□□□ 0.71
PLIN3-201ENST00000221957 TOPBP1Q92547 1522 aa19.44■□□□□ 0.7
PLIN3-201ENST00000221957 DNMBPQ6XZF7 1577 aa19.43■□□□□ 0.7
PLIN3-201ENST00000221957 ARHGAP35Q9NRY4 1499 aa19.42■□□□□ 0.7
PLIN3-201ENST00000221957 PDS5BQ9NTI5 1447 aa19.41■□□□□ 0.7
PLIN3-201ENST00000221957 URB2Q14146 1524 aaKnown RBP19.4■□□□□ 0.7
PLIN3-201ENST00000221957 RAD54L2Q9Y4B4 1467 aa19.39■□□□□ 0.69
PLIN3-201ENST00000221957 POLA1P09884 1462 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms