RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
TOM1L1-213ENST00000572405 CCDC180Q9P1Z9 1646 aa23.56■■□□□ 1.36
TOM1L1-213ENST00000572405 ZCCHC6Q5VYS8 1495 aaKnown RBP22.8■■□□□ 1.24
TOM1L1-213ENST00000572405 DCAF8L2P0C7V8 631 aa22.44■■□□□ 1.18
TOM1L1-213ENST00000572405 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
TOM1L1-213ENST00000572405 ABCC9O60706 1549 aa22.32■■□□□ 1.16
TOM1L1-213ENST00000572405 SHROOM4Q9ULL8 1493 aa22.3■■□□□ 1.16
TOM1L1-213ENST00000572405 MYO15BQ96JP2 1530 aa22.03■■□□□ 1.12
TOM1L1-213ENST00000572405 NACADO15069 1562 aa21.92■■□□□ 1.1
TOM1L1-213ENST00000572405 SCRIBQ14160 1630 aa21.79■■□□□ 1.08
TOM1L1-213ENST00000572405 RB1CC1Q8TDY2 1594 aa21.73■■□□□ 1.07
TOM1L1-213ENST00000572405 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
TOM1L1-213ENST00000572405 UNC13AQ9UPW8 1703 aa21.36■■□□□ 1.01
TOM1L1-213ENST00000572405 BICRAQ9NZM4 1560 aa21.13■□□□□ 0.97
TOM1L1-213ENST00000572405 CECR2Q9BXF3 1484 aa21.12■□□□□ 0.97
TOM1L1-213ENST00000572405 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.97
TOM1L1-213ENST00000572405 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.96
TOM1L1-213ENST00000572405 MROH2BQ7Z745 1585 aa20.99■□□□□ 0.95
TOM1L1-213ENST00000572405 BAZ1AQ9NRL2 1556 aaPredicted RBP20.91■□□□□ 0.94
TOM1L1-213ENST00000572405 SMARCA4P51532 1647 aa20.84■□□□□ 0.93
TOM1L1-213ENST00000572405 WIZO95785 1651 aa20.83■□□□□ 0.93
TOM1L1-213ENST00000572405 TOP2AP11388 1531 aaKnown RBP20.57■□□□□ 0.88
TOM1L1-213ENST00000572405 PEG3Q9GZU2 1588 aa20.54■□□□□ 0.88
TOM1L1-213ENST00000572405 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
TOM1L1-213ENST00000572405 EIF4G1Q04637 1599 aaKnown RBP20.48■□□□□ 0.87
TOM1L1-213ENST00000572405 ATAD2BQ9ULI0 1458 aa20.47■□□□□ 0.87
TOM1L1-213ENST00000572405 SMARCA2P51531 1590 aa20.43■□□□□ 0.86
TOM1L1-213ENST00000572405 CCDC88BA6NC98 1476 aa20.38■□□□□ 0.85
TOM1L1-213ENST00000572405 BAZ1BQ9UIG0 1483 aaKnown RBP20.37■□□□□ 0.85
TOM1L1-213ENST00000572405 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
TOM1L1-213ENST00000572405 HMGXB3Q12766 1538 aa20.23■□□□□ 0.83
TOM1L1-213ENST00000572405 CC2D2AQ9P2K1 1620 aa20.17■□□□□ 0.82
TOM1L1-213ENST00000572405 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
TOM1L1-213ENST00000572405 ABCC8Q09428 1581 aa20.03■□□□□ 0.8
TOM1L1-213ENST00000572405 CFTRP13569 1480 aa19.84■□□□□ 0.77
TOM1L1-213ENST00000572405 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
TOM1L1-213ENST00000572405 FAM9AQ8IZU1 332 aaPredicted RBP19.82■□□□□ 0.76
TOM1L1-213ENST00000572405 LOC105371045A0A1W2PR82 267 aa19.79■□□□□ 0.76
TOM1L1-213ENST00000572405 SYNJ1O43426 1573 aa19.79■□□□□ 0.76
TOM1L1-213ENST00000572405 CADPSQ9ULU8 1353 aa19.75■□□□□ 0.75
TOM1L1-213ENST00000572405 PRDM2Q13029 1718 aa19.73■□□□□ 0.75
TOM1L1-213ENST00000572405 DNAJC5BQ9UF47 199 aa19.72■□□□□ 0.75
TOM1L1-213ENST00000572405 SOGA1O94964 1423 aa19.66■□□□□ 0.74
TOM1L1-213ENST00000572405 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
TOM1L1-213ENST00000572405 NESP48681 1621 aa19.63■□□□□ 0.73
TOM1L1-213ENST00000572405 BIVM-ERCC5R4GMW8 1640 aa19.62■□□□□ 0.73
TOM1L1-213ENST00000572405 CUX1P39880 1505 aa19.62■□□□□ 0.73
TOM1L1-213ENST00000572405 EHMT2Q96KQ7 1210 aa19.6■□□□□ 0.73
TOM1L1-213ENST00000572405 RUSC2Q8N2Y8 1516 aa19.59■□□□□ 0.73
TOM1L1-213ENST00000572405 FANCD2Q9BXW9 1451 aa19.56■□□□□ 0.72
TOM1L1-213ENST00000572405 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
TOM1L1-213ENST00000572405 EEA1Q15075 1411 aa19.53■□□□□ 0.72
TOM1L1-213ENST00000572405 CSRNP3Q8WYN3 585 aa19.45■□□□□ 0.7
TOM1L1-213ENST00000572405 CEP164Q9UPV0 1460 aa19.43■□□□□ 0.7
TOM1L1-213ENST00000572405 PDS5BQ9NTI5 1447 aa19.4■□□□□ 0.7
TOM1L1-213ENST00000572405 FGD5Q6ZNL6 1462 aa19.39■□□□□ 0.69
TOM1L1-213ENST00000572405 DNMBPQ6XZF7 1577 aa19.38■□□□□ 0.69
TOM1L1-213ENST00000572405 KIF21AQ7Z4S6 1674 aa19.37■□□□□ 0.69
TOM1L1-213ENST00000572405 TOPBP1Q92547 1522 aa19.36■□□□□ 0.69
TOM1L1-213ENST00000572405 URB2Q14146 1524 aaKnown RBP19.33■□□□□ 0.68
TOM1L1-213ENST00000572405 GOLGA3Q08378 1498 aa19.32■□□□□ 0.68
TOM1L1-213ENST00000572405 KIF21BO75037 1637 aa19.32■□□□□ 0.68
TOM1L1-213ENST00000572405 KIF27Q86VH2 1401 aa19.31■□□□□ 0.68
TOM1L1-213ENST00000572405 POLA1P09884 1462 aaPredicted RBP19.28■□□□□ 0.68
TOM1L1-213ENST00000572405 CUX2O14529 1486 aa19.28■□□□□ 0.68
TOM1L1-213ENST00000572405 RAPGEF2Q9Y4G8 1499 aa19.25■□□□□ 0.67
TOM1L1-213ENST00000572405 UBTFP17480 764 aaKnown RBP19.25■□□□□ 0.67
TOM1L1-213ENST00000572405 TNIKQ9UKE5 1360 aa19.25■□□□□ 0.67
TOM1L1-213ENST00000572405 RAD54L2Q9Y4B4 1467 aa19.25■□□□□ 0.67
TOM1L1-213ENST00000572405 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
TOM1L1-213ENST00000572405 PRXQ9BXM0 1461 aa19.2■□□□□ 0.66
TOM1L1-213ENST00000572405 ABCA10Q8WWZ4 1543 aa19.18■□□□□ 0.66
TOM1L1-213ENST00000572405 MRC2Q9UBG0 1479 aa19.17■□□□□ 0.66
TOM1L1-213ENST00000572405 ERICH3Q5RHP9 1530 aa19.16■□□□□ 0.66
TOM1L1-213ENST00000572405 IGF1RP08069 1367 aa19.14■□□□□ 0.65
TOM1L1-213ENST00000572405 WDR97A6NE52 1622 aa19.13■□□□□ 0.65
TOM1L1-213ENST00000572405 ERCC6Q03468 1493 aa19.11■□□□□ 0.65
TOM1L1-213ENST00000572405 WDR62O43379 1518 aa19.06■□□□□ 0.64
TOM1L1-213ENST00000572405 TARBP1Q13395 1621 aaKnown RBP19.06■□□□□ 0.64
TOM1L1-213ENST00000572405 CARMIL1Q5VZK9 1371 aa19.04■□□□□ 0.64
TOM1L1-213ENST00000572405 TDRD9Q8NDG6 1382 aaKnown RBP19.04■□□□□ 0.64
TOM1L1-213ENST00000572405 ABCA5Q8WWZ7 1642 aa19.04■□□□□ 0.64
TOM1L1-213ENST00000572405 CLIP1P30622 1438 aa19.03■□□□□ 0.64
TOM1L1-213ENST00000572405 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
TOM1L1-213ENST00000572405 RANGAP1P46060 587 aaPredicted RBP19.01■□□□□ 0.63
TOM1L1-213ENST00000572405 GAPVD1Q14C86 1478 aa18.99■□□□□ 0.63
TOM1L1-213ENST00000572405 CUL7Q14999 1698 aa18.97■□□□□ 0.63
TOM1L1-213ENST00000572405 PCGF6Q9BYE7 350 aa18.95■□□□□ 0.62
TOM1L1-213ENST00000572405 IFT140Q96RY7 1462 aa18.93■□□□□ 0.62
TOM1L1-213ENST00000572405 AQRO60306 1485 aaKnown RBP eCLIP18.91■□□□□ 0.62
TOM1L1-213ENST00000572405 PPARGC1BQ86YN6 1023 aaKnown RBP18.91■□□□□ 0.62
TOM1L1-213ENST00000572405 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
TOM1L1-213ENST00000572405 PBRM1Q86U86 1689 aa18.89■□□□□ 0.61
TOM1L1-213ENST00000572405 TRIM26Q12899 539 aaPredicted RBP18.86■□□□□ 0.61
TOM1L1-213ENST00000572405 VPS8Q8N3P4 1428 aa18.86■□□□□ 0.61
TOM1L1-213ENST00000572405 ARAP1Q96P48 1450 aa18.85■□□□□ 0.61
TOM1L1-213ENST00000572405 ARHGAP35Q9NRY4 1499 aa18.82■□□□□ 0.6
TOM1L1-213ENST00000572405 GRIN2BQ13224 1484 aa18.82■□□□□ 0.6
TOM1L1-213ENST00000572405 EIF4G3O43432 1585 aaKnown RBP18.82■□□□□ 0.6
TOM1L1-213ENST00000572405 ADAMTS12P58397 1594 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms